RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TMEM191AQ9H0A3 160 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 PYGO1Q9Y3Y4 419 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 LOC107984156A0A0G2JMH3 177 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 SMKR1H3BMG3 65 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 TCAPO15273 167 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 IFI27P40305 119 aaPredicted RBP3.53□□□□□ -1.84
CLDND1-229ENST00000513988 Q1RN00 199 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 CENPWQ5EE01 88 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 SMIM29Q86T20 159 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 ARL17AQ8IVW1 177 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 Q8NDZ9 215 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 C2orf88Q9BSF0 95 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 SND1-IT1Q9HBX3 110 aa3.53□□□□□ -1.84
CLDND1-229ENST00000513988 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 PPP1R2P9O14990 202 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 MPC2O95563 127 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 PPP1R17O96001 155 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 PFN2P35080 140 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 SPRR1AP35321 89 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 PET117Q6UWS5 81 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 TEX43Q6ZNM6 134 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 TMEM141Q96I45 108 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 OBSCN-AS1Q96MR7 158 aa3.52□□□□□ -1.85
CLDND1-229ENST00000513988 TRAV9-1A0A075B6T8 112 aa3.51□□□□□ -1.85
CLDND1-229ENST00000513988 MT1BP07438 61 aa3.51□□□□□ -1.85
CLDND1-229ENST00000513988 CD164Q04900 197 aa3.51□□□□□ -1.85
CLDND1-229ENST00000513988 Q5XG85 94 aa3.51□□□□□ -1.85
CLDND1-229ENST00000513988 RAB4AP20338 218 aa3.5□□□□□ -1.85
CLDND1-229ENST00000513988 Q5VV11 94 aa3.5□□□□□ -1.85
CLDND1-229ENST00000513988 MPLKIPQ8TAP9 179 aa3.5□□□□□ -1.85
CLDND1-229ENST00000513988 COX7B2Q8TF08 81 aa3.5□□□□□ -1.85
CLDND1-229ENST00000513988 CDKN2A-AS1Q9UH64 79 aa3.5□□□□□ -1.85
CLDND1-229ENST00000513988 RAB5AP20339 215 aa3.49□□□□□ -1.85
CLDND1-229ENST00000513988 S100A5P33763 92 aa3.49□□□□□ -1.85
CLDND1-229ENST00000513988 AKR1C8PQ5T2L2 129 aa3.49□□□□□ -1.85
CLDND1-229ENST00000513988 PCP2Q8IVA1 136 aa3.49□□□□□ -1.85
CLDND1-229ENST00000513988 AMN1Q8IY45 258 aa3.49□□□□□ -1.85
CLDND1-229ENST00000513988 BIN3Q9NQY0 253 aa3.49□□□□□ -1.85
CLDND1-229ENST00000513988 NDUFA13Q9P0J0 144 aa3.49□□□□□ -1.85
CLDND1-229ENST00000513988 A4D1N5 150 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 ATP5LO75964 103 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 GIPP09681 153 aaPredicted RBP3.48□□□□□ -1.85
CLDND1-229ENST00000513988 GNG4P50150 75 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 HERVK_113P63121 156 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 ZC2HC1BQ5TFG8 222 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 SMIM12Q96EX1 92 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 KCNQ1DNQ9H478 68 aa3.48□□□□□ -1.85
CLDND1-229ENST00000513988 BORCS7-ASMTA0A0B4J1R7 106 aa3.47□□□□□ -1.85
CLDND1-229ENST00000513988 HRES1P13985 223 aa3.47□□□□□ -1.85
CLDND1-229ENST00000513988 H2BFSP57053 126 aa3.47□□□□□ -1.85
CLDND1-229ENST00000513988 BORCS7Q96B45 105 aa3.47□□□□□ -1.85
CLDND1-229ENST00000513988 Q9BRP9 147 aa3.47□□□□□ -1.85
CLDND1-229ENST00000513988 SMIM1B2RUZ4 78 aa3.46□□□□□ -1.86
CLDND1-229ENST00000513988 LYRM1O43325 122 aa3.46□□□□□ -1.86
CLDND1-229ENST00000513988 SEC11AP67812 179 aa3.46□□□□□ -1.86
CLDND1-229ENST00000513988 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CLDND1-229ENST00000513988 MTURNQ8N3F0 131 aa3.46□□□□□ -1.86
CLDND1-229ENST00000513988 C20orf78Q9BR46 151 aa3.46□□□□□ -1.86
CLDND1-229ENST00000513988 IGLV5-39A0A0G2JS06 123 aa3.45□□□□□ -1.86
CLDND1-229ENST00000513988 CCL20P78556 96 aa3.45□□□□□ -1.86
CLDND1-229ENST00000513988 S100A12P80511 92 aa3.45□□□□□ -1.86
CLDND1-229ENST00000513988 PDZD11Q5EBL8 140 aa3.45□□□□□ -1.86
CLDND1-229ENST00000513988 Q96NJ1 140 aa3.45□□□□□ -1.86
CLDND1-229ENST00000513988 VCX2Q9H322 139 aa3.45□□□□□ -1.86
CLDND1-229ENST00000513988 A0A1B0GV50 99 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 PLA2G10O15496 165 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 SLC25A34Q6PIV7 304 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 ALKAL2Q6UX46 152 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 C2orf66Q6UXQ4 117 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 KCNRGQ8N5I3 272 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 ST20-AS1Q8NBB2 130 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 C11orf52Q96A22 123 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 ZNF625Q96I27 306 aaPredicted RBP3.44□□□□□ -1.86
CLDND1-229ENST00000513988 SMIM2Q9BVW6 85 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 ERG28Q9UKR5 140 aa3.44□□□□□ -1.86
CLDND1-229ENST00000513988 ATP6V1G2O95670 118 aa3.43□□□□□ -1.86
CLDND1-229ENST00000513988 IL7P13232 177 aa3.43□□□□□ -1.86
CLDND1-229ENST00000513988 RPL7L1Q6DKI1 246 aaKnown RBP3.43□□□□□ -1.86
CLDND1-229ENST00000513988 Q6ZRX8 168 aa3.43□□□□□ -1.86
CLDND1-229ENST00000513988 AMELXQ99217 191 aa3.43□□□□□ -1.86
CLDND1-229ENST00000513988 IMUPQ9GZP8 106 aa3.43□□□□□ -1.86
CLDND1-229ENST00000513988 PRO1933Q9H354 126 aa3.43□□□□□ -1.86
CLDND1-229ENST00000513988 A0A1B0GUT8 65 aa3.42□□□□□ -1.86
CLDND1-229ENST00000513988 NCR3O14931 201 aa3.42□□□□□ -1.86
CLDND1-229ENST00000513988 TCL1BO95988 128 aa3.42□□□□□ -1.86
CLDND1-229ENST00000513988 IGFL1Q6UW32 110 aa3.42□□□□□ -1.86
CLDND1-229ENST00000513988 SFT2D1Q8WV19 159 aa3.42□□□□□ -1.86
CLDND1-229ENST00000513988 LAMTOR3Q9UHA4 124 aa3.42□□□□□ -1.86
CLDND1-229ENST00000513988 TRBV24-1A0A075B6N3 115 aa3.41□□□□□ -1.86
CLDND1-229ENST00000513988 TRBV10-3A0A0K0K1G6 114 aa3.41□□□□□ -1.86
CLDND1-229ENST00000513988 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
CLDND1-229ENST00000513988 COX17Q14061 63 aa3.41□□□□□ -1.86
CLDND1-229ENST00000513988 A8MUU9 505 aa3.4□□□□□ -1.87
CLDND1-229ENST00000513988 PCP4P48539 62 aa3.4□□□□□ -1.87
CLDND1-229ENST00000513988 JOSD1Q15040 202 aaPredicted RBP3.4□□□□□ -1.87
CLDND1-229ENST00000513988 ENKURQ8TC29 256 aa3.4□□□□□ -1.87
CLDND1-229ENST00000513988 FAM240BA0A1B0GVZ2 78 aa3.39□□□□□ -1.87
CLDND1-229ENST00000513988 C5orf52A6NGY3 159 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms