RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 LINC00158P58513 81 aa9.65□□□□□ -0.86
POLR2J3-218ENST00000513506 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
POLR2J3-218ENST00000513506 TIMM17BO60830 172 aa9.64□□□□□ -0.87
POLR2J3-218ENST00000513506 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
POLR2J3-218ENST00000513506 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-218ENST00000513506 ATOH7Q8N100 152 aa9.64□□□□□ -0.87
POLR2J3-218ENST00000513506 M0QXV9 152 aa9.63□□□□□ -0.87
POLR2J3-218ENST00000513506 VPREB1P12018 145 aa9.63□□□□□ -0.87
POLR2J3-218ENST00000513506 MEIG1Q5JSS6 88 aa9.63□□□□□ -0.87
POLR2J3-218ENST00000513506 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-218ENST00000513506 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
POLR2J3-218ENST00000513506 LBHQ53QV2 105 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-218ENST00000513506 LITAFQ99732 161 aa9.62□□□□□ -0.87
POLR2J3-218ENST00000513506 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
POLR2J3-218ENST00000513506 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-218ENST00000513506 RPL24P83731 157 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-218ENST00000513506 JOSD1Q15040 202 aaPredicted RBP9.61□□□□□ -0.87
POLR2J3-218ENST00000513506 MRPL55Q7Z7F7 128 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-218ENST00000513506 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
POLR2J3-218ENST00000513506 KRTAP11-1Q8IUC1 163 aa9.6□□□□□ -0.87
POLR2J3-218ENST00000513506 Q8NDZ9 215 aa9.6□□□□□ -0.87
POLR2J3-218ENST00000513506 SCGB1D1O95968 90 aa9.59□□□□□ -0.87
POLR2J3-218ENST00000513506 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
POLR2J3-218ENST00000513506 TTTY13Q9BZ97 58 aa9.59□□□□□ -0.87
POLR2J3-218ENST00000513506 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
POLR2J3-218ENST00000513506 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
POLR2J3-218ENST00000513506 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
POLR2J3-218ENST00000513506 MYCBP2O75592 4640 aa9.58□□□□□ -0.88
POLR2J3-218ENST00000513506 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
POLR2J3-218ENST00000513506 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
POLR2J3-218ENST00000513506 PCP2Q8IVA1 136 aa9.57□□□□□ -0.88
POLR2J3-218ENST00000513506 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
POLR2J3-218ENST00000513506 TMA7Q9Y2S6 64 aaKnown RBP9.57□□□□□ -0.88
POLR2J3-218ENST00000513506 NDUFC2O95298 119 aa9.56□□□□□ -0.88
POLR2J3-218ENST00000513506 NKAPP1Q8N9T2 125 aa9.56□□□□□ -0.88
POLR2J3-218ENST00000513506 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
POLR2J3-218ENST00000513506 BOD1L2Q8IYS8 172 aa9.55□□□□□ -0.88
POLR2J3-218ENST00000513506 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 M0R378 163 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 HNRNPA3P51991 378 aaKnown RBP9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 SOSTDC1Q6X4U4 206 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 Q6ZVH6 145 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 DAND5Q8N907 189 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 SPANXDQ9BXN6 97 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 SPANXCQ9NY87 97 aa9.54□□□□□ -0.88
POLR2J3-218ENST00000513506 DLEU1O43261 78 aa9.53□□□□□ -0.88
POLR2J3-218ENST00000513506 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-218ENST00000513506 UBE2BP63146 152 aa9.53□□□□□ -0.88
POLR2J3-218ENST00000513506 FLG2Q5D862 2391 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-218ENST00000513506 TMEM238C9JI98 176 aa9.52□□□□□ -0.89
POLR2J3-218ENST00000513506 PYY3Q5JQD4 70 aa9.52□□□□□ -0.89
POLR2J3-218ENST00000513506 LINC00308Q8TCZ7 52 aa9.52□□□□□ -0.89
POLR2J3-218ENST00000513506 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
POLR2J3-218ENST00000513506 COX8AP10176 69 aa9.51□□□□□ -0.89
POLR2J3-218ENST00000513506 IFITM1P13164 125 aa9.51□□□□□ -0.89
POLR2J3-218ENST00000513506 SPINK6Q6UWN8 80 aa9.51□□□□□ -0.89
POLR2J3-218ENST00000513506 SCGB1D4Q6XE38 83 aa9.51□□□□□ -0.89
POLR2J3-218ENST00000513506 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
POLR2J3-218ENST00000513506 MIEN1Q9BRT3 115 aa9.5□□□□□ -0.89
POLR2J3-218ENST00000513506 SPANXB1Q9NS25 103 aaPredicted RBP9.5□□□□□ -0.89
POLR2J3-218ENST00000513506 BCE1O60756 84 aa9.49□□□□□ -0.89
POLR2J3-218ENST00000513506 FAT3Q8TDW7 4589 aa9.49□□□□□ -0.89
POLR2J3-218ENST00000513506 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
POLR2J3-218ENST00000513506 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
POLR2J3-218ENST00000513506 RPL37AP8A6NKH3 93 aa9.48□□□□□ -0.89
POLR2J3-218ENST00000513506 COPS9Q8WXC6 57 aa9.48□□□□□ -0.89
POLR2J3-218ENST00000513506 KCNQ1DNQ9H478 68 aa9.48□□□□□ -0.89
POLR2J3-218ENST00000513506 KRTAP13-1Q8IUC0 172 aa9.47□□□□□ -0.89
POLR2J3-218ENST00000513506 VAMP8Q9BV40 100 aa9.47□□□□□ -0.89
POLR2J3-218ENST00000513506 IGLV6-57P01721 117 aa9.46□□□□□ -0.9
POLR2J3-218ENST00000513506 SPRR1AP35321 89 aa9.46□□□□□ -0.9
POLR2J3-218ENST00000513506 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
POLR2J3-218ENST00000513506 ZNF861PO60384 105 aa9.45□□□□□ -0.9
POLR2J3-218ENST00000513506 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
POLR2J3-218ENST00000513506 SPATA45Q537H7 98 aa9.45□□□□□ -0.9
POLR2J3-218ENST00000513506 TMEM126AQ9H061 195 aa9.45□□□□□ -0.9
POLR2J3-218ENST00000513506 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
POLR2J3-218ENST00000513506 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 KRTAP4-16G5E9R7 235 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 H0Y9J4 135 aa9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 PRYO14603 147 aa9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 OXTP01178 125 aa9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 HIGD1BQ9P298 99 aa9.44□□□□□ -0.9
POLR2J3-218ENST00000513506 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
POLR2J3-218ENST00000513506 NCR3O14931 201 aa9.43□□□□□ -0.9
POLR2J3-218ENST00000513506 DIRC1Q969H9 104 aa9.43□□□□□ -0.9
POLR2J3-218ENST00000513506 NPC2P61916 151 aa9.42□□□□□ -0.9
POLR2J3-218ENST00000513506 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
POLR2J3-218ENST00000513506 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
POLR2J3-218ENST00000513506 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-218ENST00000513506 DDTP30046 118 aa9.41□□□□□ -0.9
POLR2J3-218ENST00000513506 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
POLR2J3-218ENST00000513506 SLC25A34Q6PIV7 304 aa9.41□□□□□ -0.9
POLR2J3-218ENST00000513506 C14orf144Q96I85 54 aa9.41□□□□□ -0.9
POLR2J3-218ENST00000513506 CBY1Q9Y3M2 126 aa9.4□□□□□ -0.9
POLR2J3-218ENST00000513506 S100A12P80511 92 aa9.38□□□□□ -0.91
POLR2J3-218ENST00000513506 C2orf91Q6ZV80 131 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms