RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TMEM238C9JI98 176 aa7.93□□□□□ -1.14
RNF4-215ENST00000511843 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
RNF4-215ENST00000511843 RPL28P46779 137 aaKnown RBP7.93□□□□□ -1.14
RNF4-215ENST00000511843 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
RNF4-215ENST00000511843 LRP2P98164 4655 aa7.92□□□□□ -1.14
RNF4-215ENST00000511843 SFTA2Q6UW10 78 aa7.92□□□□□ -1.14
RNF4-215ENST00000511843 UBE2AP49459 152 aa7.91□□□□□ -1.14
RNF4-215ENST00000511843 PRLHP81277 87 aa7.91□□□□□ -1.14
RNF4-215ENST00000511843 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
RNF4-215ENST00000511843 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
RNF4-215ENST00000511843 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
RNF4-215ENST00000511843 NDUFA12Q9UI09 145 aa7.91□□□□□ -1.14
RNF4-215ENST00000511843 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
RNF4-215ENST00000511843 HSPB8Q9UJY1 196 aa7.9□□□□□ -1.14
RNF4-215ENST00000511843 A0A087X002 238 aa7.89□□□□□ -1.15
RNF4-215ENST00000511843 FAM19A1Q7Z5A9 133 aa7.89□□□□□ -1.15
RNF4-215ENST00000511843 MIR7-3HGQ8N6C7 128 aa7.89□□□□□ -1.15
RNF4-215ENST00000511843 TMEM126AQ9H061 195 aa7.89□□□□□ -1.15
RNF4-215ENST00000511843 M0R378 163 aa7.88□□□□□ -1.15
RNF4-215ENST00000511843 ATP6V1G1O75348 118 aa7.88□□□□□ -1.15
RNF4-215ENST00000511843 DPM2O94777 84 aa7.88□□□□□ -1.15
RNF4-215ENST00000511843 NCR3O14931 201 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 LEPROTO15243 131 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BKO60814 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BJP06899 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BOP23527 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 PLNP26678 52 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BBP33778 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BDP58876 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BCP62807 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HERV-K104P63124 156 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST2H2BEQ16778 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.87□□□□□ -1.15
RNF4-215ENST00000511843 BOD1L2Q8IYS8 172 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 DAND5Q8N907 189 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BHQ93079 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BNQ99877 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 HIST1H2BMQ99879 126 aa7.87□□□□□ -1.15
RNF4-215ENST00000511843 MYMXA0A1B0GTQ4 84 aa7.86□□□□□ -1.15
RNF4-215ENST00000511843 IGKCP01834 107 aa7.86□□□□□ -1.15
RNF4-215ENST00000511843 J3QQQ9 107 aa7.85□□□□□ -1.15
RNF4-215ENST00000511843 PLEKHB2Q96CS7 222 aa7.85□□□□□ -1.15
RNF4-215ENST00000511843 MAP1LC3CQ9BXW4 147 aa7.85□□□□□ -1.15
RNF4-215ENST00000511843 TSPAN13O95857 204 aa7.83□□□□□ -1.16
RNF4-215ENST00000511843 CRYGAP11844 174 aa7.83□□□□□ -1.16
RNF4-215ENST00000511843 HERVK_113P61574 105 aa7.83□□□□□ -1.16
RNF4-215ENST00000511843 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
RNF4-215ENST00000511843 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
RNF4-215ENST00000511843 LGALS3P17931 250 aaKnown RBP7.82□□□□□ -1.16
RNF4-215ENST00000511843 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
RNF4-215ENST00000511843 HIGD2AQ9BW72 106 aa7.82□□□□□ -1.16
RNF4-215ENST00000511843 LPAP08519 4548 aa7.82□□□□□ -1.16
RNF4-215ENST00000511843 SYS1-DBNDD2H3BUS1 97 aa7.81□□□□□ -1.16
RNF4-215ENST00000511843 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
RNF4-215ENST00000511843 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
RNF4-215ENST00000511843 NPC2P61916 151 aa7.79□□□□□ -1.16
RNF4-215ENST00000511843 E9PLD3 99 aa7.78□□□□□ -1.16
RNF4-215ENST00000511843 PRYO14603 147 aa7.78□□□□□ -1.16
RNF4-215ENST00000511843 EIF4EBP3O60516 100 aaPredicted RBP7.78□□□□□ -1.16
RNF4-215ENST00000511843 NMUP48645 174 aa7.78□□□□□ -1.16
RNF4-215ENST00000511843 PRR4Q16378 134 aa7.78□□□□□ -1.16
RNF4-215ENST00000511843 A0A0J9YXY3 114 aa7.77□□□□□ -1.17
RNF4-215ENST00000511843 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
RNF4-215ENST00000511843 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
RNF4-215ENST00000511843 LINC01545Q5VT33 79 aa7.77□□□□□ -1.17
RNF4-215ENST00000511843 SOSTDC1Q6X4U4 206 aa7.77□□□□□ -1.17
RNF4-215ENST00000511843 KCNQ1DNQ9H478 68 aa7.77□□□□□ -1.17
RNF4-215ENST00000511843 IGKV2D-26A0A0A0MRZ7 120 aa7.76□□□□□ -1.17
RNF4-215ENST00000511843 LOC107984156A0A0G2JMH3 177 aa7.76□□□□□ -1.17
RNF4-215ENST00000511843 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
RNF4-215ENST00000511843 SPRR1AP35321 89 aa7.76□□□□□ -1.17
RNF4-215ENST00000511843 ARL17AQ8IVW1 177 aa7.76□□□□□ -1.17
RNF4-215ENST00000511843 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
RNF4-215ENST00000511843 ETDCA0A1B0GVM5 59 aa7.75□□□□□ -1.17
RNF4-215ENST00000511843 KRTAP4-16G5E9R7 235 aaPredicted RBP7.75□□□□□ -1.17
RNF4-215ENST00000511843 PET117Q6UWS5 81 aa7.75□□□□□ -1.17
RNF4-215ENST00000511843 MIEN1Q9BRT3 115 aa7.75□□□□□ -1.17
RNF4-215ENST00000511843 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
RNF4-215ENST00000511843 DDTP30046 118 aa7.74□□□□□ -1.17
RNF4-215ENST00000511843 KRTDAPP60985 99 aa7.74□□□□□ -1.17
RNF4-215ENST00000511843 LINC00337Q8N6G1 96 aa7.74□□□□□ -1.17
RNF4-215ENST00000511843 SPRR4Q96PI1 79 aa7.74□□□□□ -1.17
RNF4-215ENST00000511843 COA6Q5JTJ3 125 aaKnown RBP7.73□□□□□ -1.17
RNF4-215ENST00000511843 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
RNF4-215ENST00000511843 SMCR5Q8TEV8 140 aa7.73□□□□□ -1.17
RNF4-215ENST00000511843 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
RNF4-215ENST00000511843 TRBV10-2A0A0K0K1G8 114 aa7.72□□□□□ -1.17
RNF4-215ENST00000511843 LITAFQ99732 161 aa7.72□□□□□ -1.17
RNF4-215ENST00000511843 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
RNF4-215ENST00000511843 PPDPFQ9H3Y8 114 aa7.72□□□□□ -1.17
RNF4-215ENST00000511843 B5MCH6 92 aa7.71□□□□□ -1.18
RNF4-215ENST00000511843 ERC2-IT1O76042 136 aa7.71□□□□□ -1.18
RNF4-215ENST00000511843 S100A7L2Q5SY68 101 aa7.71□□□□□ -1.18
RNF4-215ENST00000511843 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
RNF4-215ENST00000511843 NDUFC2O95298 119 aa7.7□□□□□ -1.18
RNF4-215ENST00000511843 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
RNF4-215ENST00000511843 S100A12P80511 92 aa7.69□□□□□ -1.18
RNF4-215ENST00000511843 ATOH7Q8N100 152 aa7.69□□□□□ -1.18
RNF4-215ENST00000511843 LINC00308Q8TCZ7 52 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms