RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 DEC1Q9P2X7 70 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 UTP20O75691 2785 aaKnown RBP3.3□□□□□ -1.88
NUP54-210ENST00000510884 FLNAP21333 2647 aaKnown RBP3.3□□□□□ -1.88
NUP54-210ENST00000510884 F8P00451 2351 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 HIVEP1P15822 2718 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 ANKHD1Q8IWZ3 2542 aaKnown RBP3.29□□□□□ -1.88
NUP54-210ENST00000510884 IGHV3-66A0A0C4DH42 116 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 LCE6AA0A183 80 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 BPY2O14599 106 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 CGB3P0DN86 165 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 CGB7P0DN87 165 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 DEFB114Q30KQ6 69 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
NUP54-210ENST00000510884 CNFNQ9BYD5 112 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 ASXL3Q9C0F0 2248 aa3.29□□□□□ -1.88
NUP54-210ENST00000510884 MUC22E2RYF6 1773 aaPredicted RBP3.28□□□□□ -1.88
NUP54-210ENST00000510884 DSCAML1Q8TD84 2053 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 IGHV3-15A0A0B4J1V0 119 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 TRBV10-1A0A0K0K1A3 114 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 B4DSR2 109 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 LECT2O14960 151 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 IGLV2-23P01705 113 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 P0C879 139 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 CMC4P56277 68 aaPredicted RBP3.28□□□□□ -1.88
NUP54-210ENST00000510884 LYZL1Q6UWQ5 148 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 CENPEQ02224 2701 aa3.28□□□□□ -1.88
NUP54-210ENST00000510884 TRAV21A0A0B4J279 112 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 A8MWP4 228 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 LHBP01229 141 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 FAM27BQ5VT28 67 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 C7orf33Q8WU49 177 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 LINC00208Q96KT6 92 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 MYOFQ9NZM1 2061 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 HIVEP3Q5T1R4 2406 aa3.27□□□□□ -1.89
NUP54-210ENST00000510884 LAMA1P25391 3075 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 NUP214P35658 2090 aaPredicted RBP3.26□□□□□ -1.89
NUP54-210ENST00000510884 COL5A1P20908 1838 aaPredicted RBP3.26□□□□□ -1.89
NUP54-210ENST00000510884 IGLV2-18A0A075B6J9 118 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 H3BPC8 53 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 IGHV1-46P01743 117 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 CLPSP04118 112 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 CTSGP08311 255 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 KPRPQ5T749 579 aaPredicted RBP3.26□□□□□ -1.89
NUP54-210ENST00000510884 Q6ZQT0 140 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 SMIM2Q9BVW6 85 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 PCNX2A6NKB5 2137 aa3.26□□□□□ -1.89
NUP54-210ENST00000510884 HEATR1Q9H583 2144 aaKnown RBP3.26□□□□□ -1.89
NUP54-210ENST00000510884 CSMD2Q7Z408 3487 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 IGLV11-55A0A075B6I3 123 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 IGHV3OR16-8A0A075B7F1 116 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 LOC110117498A0A087WWA1 95 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 TRAV10A0A0B4J240 114 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 IGLV3-25P01717 112 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 IGKV3-11P04433 115 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 IGHV1-8P0DP01 117 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 SPAG11BQ08648 103 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 NNATQ16517 81 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 SPAG11AQ6PDA7 123 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.25□□□□□ -1.89
NUP54-210ENST00000510884 LYPD1Q8N2G4 141 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 WFDC9Q8NEX5 89 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 CELSR2Q9HCU4 2923 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 EML5Q05BV3 1969 aa3.25□□□□□ -1.89
NUP54-210ENST00000510884 NACAE9PAV3 2078 aa3.24□□□□□ -1.89
NUP54-210ENST00000510884 IGHV1-3A0A0C4DH29 117 aa3.24□□□□□ -1.89
NUP54-210ENST00000510884 C10orf142B7Z368 130 aa3.24□□□□□ -1.89
NUP54-210ENST00000510884 DEFB106AQ8N104 65 aa3.24□□□□□ -1.89
NUP54-210ENST00000510884 HIGD2AQ9BW72 106 aa3.24□□□□□ -1.89
NUP54-210ENST00000510884 DOPEY2Q9Y3R5 2298 aa3.24□□□□□ -1.89
NUP54-210ENST00000510884 TET1Q8NFU7 2136 aa3.23□□□□□ -1.89
NUP54-210ENST00000510884 IGHV3-64DA0A0J9YX35 117 aa3.23□□□□□ -1.89
NUP54-210ENST00000510884 A6NDX4 124 aa3.23□□□□□ -1.89
NUP54-210ENST00000510884 CNBPP62633 177 aaKnown RBP3.23□□□□□ -1.89
NUP54-210ENST00000510884 C14orf178Q8N769 122 aaPredicted RBP3.23□□□□□ -1.89
NUP54-210ENST00000510884 Q8N9W7 124 aa3.23□□□□□ -1.89
NUP54-210ENST00000510884 ZCCHC13Q8WW36 166 aaKnown RBP3.23□□□□□ -1.89
NUP54-210ENST00000510884 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
NUP54-210ENST00000510884 KLK9Q9UKQ9 250 aa3.23□□□□□ -1.89
NUP54-210ENST00000510884 FAM215AQ9Y5M1 114 aa3.23□□□□□ -1.89
NUP54-210ENST00000510884 APC2O95996 2303 aa3.22□□□□□ -1.89
NUP54-210ENST00000510884 PCLOQ9Y6V0 5065 aa3.22□□□□□ -1.89
NUP54-210ENST00000510884 IGLV4-69A0A075B6H9 119 aa3.22□□□□□ -1.89
NUP54-210ENST00000510884 DEFA4P12838 97 aa3.22□□□□□ -1.89
NUP54-210ENST00000510884 Q6ZS52 159 aa3.22□□□□□ -1.89
NUP54-210ENST00000510884 FDCSPQ8NFU4 85 aa3.22□□□□□ -1.89
NUP54-210ENST00000510884 DSCAMO60469 2012 aa3.22□□□□□ -1.89
NUP54-210ENST00000510884 IGKV1D-42A0A075B6H8 117 aa3.21□□□□□ -1.9
NUP54-210ENST00000510884 H0Y9P7 68 aa3.21□□□□□ -1.9
NUP54-210ENST00000510884 MGPP08493 103 aa3.21□□□□□ -1.9
NUP54-210ENST00000510884 C1orf137Q5JT78 98 aa3.21□□□□□ -1.9
NUP54-210ENST00000510884 LINC00322Q6ZN03 302 aaPredicted RBP3.21□□□□□ -1.9
NUP54-210ENST00000510884 WFDC10AQ9H1F0 79 aa3.21□□□□□ -1.9
NUP54-210ENST00000510884 PLAC8Q9NZF1 115 aa3.21□□□□□ -1.9
NUP54-210ENST00000510884 MEGF8Q7Z7M0 2845 aa3.21□□□□□ -1.9
NUP54-210ENST00000510884 MPDZO75970 2070 aa3.2□□□□□ -1.9
NUP54-210ENST00000510884 IGLV3-19P01714 112 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms