RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 COMMD7Q86VX2 200 aa8.91□□□□□ -0.98
SMAD5-205ENST00000509297 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
SMAD5-205ENST00000509297 Q8NDZ9 215 aa8.91□□□□□ -0.98
SMAD5-205ENST00000509297 TRAPPC1Q9Y5R8 145 aa8.91□□□□□ -0.98
SMAD5-205ENST00000509297 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
SMAD5-205ENST00000509297 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
SMAD5-205ENST00000509297 RETNLBQ9BQ08 111 aa8.89□□□□□ -0.99
SMAD5-205ENST00000509297 MUC17Q685J3 4493 aa8.88□□□□□ -0.99
SMAD5-205ENST00000509297 PMCHL1Q16048 86 aa8.88□□□□□ -0.99
SMAD5-205ENST00000509297 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
SMAD5-205ENST00000509297 SPAG11AQ6PDA7 123 aa8.87□□□□□ -0.99
SMAD5-205ENST00000509297 LINC00158P58513 81 aa8.86□□□□□ -0.99
SMAD5-205ENST00000509297 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
SMAD5-205ENST00000509297 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
SMAD5-205ENST00000509297 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
SMAD5-205ENST00000509297 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
SMAD5-205ENST00000509297 TMEM223A0PJW6 202 aa8.85□□□□□ -0.99
SMAD5-205ENST00000509297 SPRR4Q96PI1 79 aa8.85□□□□□ -0.99
SMAD5-205ENST00000509297 HIGD2AQ9BW72 106 aa8.85□□□□□ -0.99
SMAD5-205ENST00000509297 C3orf22Q8N5N4 141 aa8.84□□□□□ -0.99
SMAD5-205ENST00000509297 ZNF706Q9Y5V0 76 aaPredicted RBP8.84□□□□□ -0.99
SMAD5-205ENST00000509297 CHCHD1Q96BP2 118 aaKnown RBP8.83□□□□□ -1
SMAD5-205ENST00000509297 PRYO14603 147 aa8.82□□□□□ -1
SMAD5-205ENST00000509297 SPRR1AP35321 89 aa8.82□□□□□ -1
SMAD5-205ENST00000509297 LINC00337Q8N6G1 96 aa8.82□□□□□ -1
SMAD5-205ENST00000509297 FP248Q71RG6 208 aaPredicted RBP8.81□□□□□ -1
SMAD5-205ENST00000509297 IFI27L1Q96BM0 104 aa8.81□□□□□ -1
SMAD5-205ENST00000509297 PPDPFQ9H3Y8 114 aa8.81□□□□□ -1
SMAD5-205ENST00000509297 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
SMAD5-205ENST00000509297 LINC00587B1AMM8 73 aa8.8□□□□□ -1
SMAD5-205ENST00000509297 SMIM13P0DJ93 91 aa8.8□□□□□ -1
SMAD5-205ENST00000509297 HERV-K104P63124 156 aa8.8□□□□□ -1
SMAD5-205ENST00000509297 BOD1L2Q8IYS8 172 aa8.8□□□□□ -1
SMAD5-205ENST00000509297 A0A0U1RRA0 63 aa8.79□□□□□ -1
SMAD5-205ENST00000509297 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
SMAD5-205ENST00000509297 ATP6V1G1O75348 118 aa8.79□□□□□ -1
SMAD5-205ENST00000509297 SNAPINO95295 136 aa8.79□□□□□ -1
SMAD5-205ENST00000509297 APOC3P02656 99 aa8.79□□□□□ -1
SMAD5-205ENST00000509297 SVBPQ8N300 66 aa8.79□□□□□ -1
SMAD5-205ENST00000509297 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
SMAD5-205ENST00000509297 C4orf48Q5BLP8 95 aa8.78□□□□□ -1
SMAD5-205ENST00000509297 NDUFA5Q16718 116 aa8.77□□□□□ -1.01
SMAD5-205ENST00000509297 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
SMAD5-205ENST00000509297 MIR7-3HGQ8N6C7 128 aa8.77□□□□□ -1.01
SMAD5-205ENST00000509297 YPEL4Q96NS1 127 aa8.77□□□□□ -1.01
SMAD5-205ENST00000509297 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
SMAD5-205ENST00000509297 MAP1LC3CQ9BXW4 147 aa8.76□□□□□ -1.01
SMAD5-205ENST00000509297 LOC107984156A0A0G2JMH3 177 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 MYMXA0A1B0GTQ4 84 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 SPINK1P00995 79 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 ARL17AQ8IVW1 177 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 Q8NBF4 154 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 SMCR5Q8TEV8 140 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
SMAD5-205ENST00000509297 TRBV10-3A0A0K0K1G6 114 aa8.74□□□□□ -1.01
SMAD5-205ENST00000509297 NCR3O14931 201 aa8.74□□□□□ -1.01
SMAD5-205ENST00000509297 S100A12P80511 92 aa8.74□□□□□ -1.01
SMAD5-205ENST00000509297 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
SMAD5-205ENST00000509297 TRBV10-2A0A0K0K1G8 114 aa8.72□□□□□ -1.01
SMAD5-205ENST00000509297 HSBP1O75506 76 aa8.72□□□□□ -1.01
SMAD5-205ENST00000509297 DAND5Q8N907 189 aa8.72□□□□□ -1.01
SMAD5-205ENST00000509297 B5MCH6 92 aa8.71□□□□□ -1.02
SMAD5-205ENST00000509297 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.02
SMAD5-205ENST00000509297 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
SMAD5-205ENST00000509297 LEPROTO15243 131 aa8.69□□□□□ -1.02
SMAD5-205ENST00000509297 ASB16-AS1Q495Z4 193 aa8.69□□□□□ -1.02
SMAD5-205ENST00000509297 SSBP3-AS1Q7Z2R9 100 aa8.69□□□□□ -1.02
SMAD5-205ENST00000509297 PLNP26678 52 aa8.68□□□□□ -1.02
SMAD5-205ENST00000509297 TSPEAR-AS2P59090 65 aa8.68□□□□□ -1.02
SMAD5-205ENST00000509297 LEPROTL1O95214 131 aa8.67□□□□□ -1.02
SMAD5-205ENST00000509297 DDTP30046 118 aa8.67□□□□□ -1.02
SMAD5-205ENST00000509297 GAGE2AQ6NT46 116 aa8.67□□□□□ -1.02
SMAD5-205ENST00000509297 Q6ZRX8 168 aa8.67□□□□□ -1.02
SMAD5-205ENST00000509297 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
SMAD5-205ENST00000509297 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
SMAD5-205ENST00000509297 NDUFC2O95298 119 aa8.66□□□□□ -1.02
SMAD5-205ENST00000509297 NMUP48645 174 aa8.66□□□□□ -1.02
SMAD5-205ENST00000509297 Q9BRP9 147 aa8.66□□□□□ -1.02
SMAD5-205ENST00000509297 J3QQQ9 107 aa8.65□□□□□ -1.02
SMAD5-205ENST00000509297 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
SMAD5-205ENST00000509297 H0Y8G0 127 aa8.64□□□□□ -1.03
SMAD5-205ENST00000509297 LINC00310P59036 64 aa8.64□□□□□ -1.03
SMAD5-205ENST00000509297 MOBPQ13875 183 aa8.64□□□□□ -1.03
SMAD5-205ENST00000509297 Q8N377 158 aa8.64□□□□□ -1.03
SMAD5-205ENST00000509297 MIEN1Q9BRT3 115 aa8.64□□□□□ -1.03
SMAD5-205ENST00000509297 SLC25A20O43772 301 aa8.63□□□□□ -1.03
SMAD5-205ENST00000509297 DPM2O94777 84 aa8.63□□□□□ -1.03
SMAD5-205ENST00000509297 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
SMAD5-205ENST00000509297 HERVK_113P61574 105 aa8.63□□□□□ -1.03
SMAD5-205ENST00000509297 HSPB8Q9UJY1 196 aa8.63□□□□□ -1.03
SMAD5-205ENST00000509297 IGLV9-49A0A0B4J1Y8 123 aa8.62□□□□□ -1.03
SMAD5-205ENST00000509297 SERF1AO75920 110 aa8.62□□□□□ -1.03
SMAD5-205ENST00000509297 TRGC2P03986 189 aa8.62□□□□□ -1.03
SMAD5-205ENST00000509297 JOSD1Q15040 202 aaPredicted RBP8.62□□□□□ -1.03
SMAD5-205ENST00000509297 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
SMAD5-205ENST00000509297 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
SMAD5-205ENST00000509297 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
SMAD5-205ENST00000509297 TRAV23DV6A0A075B6W5 121 aa8.59□□□□□ -1.03
SMAD5-205ENST00000509297 IGKCP01834 107 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms