RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 F8WDY8 70 aa9.94□□□□□ -0.82
LMNA-222ENST00000508500 NDUFA1O15239 70 aa9.94□□□□□ -0.82
LMNA-222ENST00000508500 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
LMNA-222ENST00000508500 PLEKHB2Q96CS7 222 aa9.94□□□□□ -0.82
LMNA-222ENST00000508500 PRO1933Q9H354 126 aa9.94□□□□□ -0.82
LMNA-222ENST00000508500 RNF213Q63HN8 5207 aa9.94□□□□□ -0.82
LMNA-222ENST00000508500 LEPROTO15243 131 aa9.93□□□□□ -0.82
LMNA-222ENST00000508500 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
LMNA-222ENST00000508500 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
LMNA-222ENST00000508500 LINC00469Q8N7U9 141 aa9.93□□□□□ -0.82
LMNA-222ENST00000508500 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
LMNA-222ENST00000508500 CDKN2A-AS1Q9UH64 79 aa9.92□□□□□ -0.82
LMNA-222ENST00000508500 DDTP30046 118 aa9.91□□□□□ -0.82
LMNA-222ENST00000508500 NMUP48645 174 aa9.91□□□□□ -0.82
LMNA-222ENST00000508500 C14orf144Q96I85 54 aa9.91□□□□□ -0.82
LMNA-222ENST00000508500 IGKV2D-26A0A0A0MRZ7 120 aa9.9□□□□□ -0.82
LMNA-222ENST00000508500 C2orf82Q6UX34 121 aa9.9□□□□□ -0.82
LMNA-222ENST00000508500 IGLV5-39A0A0G2JS06 123 aa9.89□□□□□ -0.83
LMNA-222ENST00000508500 J3QQQ9 107 aa9.89□□□□□ -0.83
LMNA-222ENST00000508500 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
LMNA-222ENST00000508500 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
LMNA-222ENST00000508500 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
LMNA-222ENST00000508500 LGALS3P17931 250 aaKnown RBP9.88□□□□□ -0.83
LMNA-222ENST00000508500 HIGD1BQ9P298 99 aa9.88□□□□□ -0.83
LMNA-222ENST00000508500 MYMXA0A1B0GTQ4 84 aa9.87□□□□□ -0.83
LMNA-222ENST00000508500 SFTA2Q6UW10 78 aa9.87□□□□□ -0.83
LMNA-222ENST00000508500 FAM19A5Q7Z5A7 132 aaPredicted RBP9.87□□□□□ -0.83
LMNA-222ENST00000508500 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
LMNA-222ENST00000508500 PCP4L1A6NKN8 68 aa9.86□□□□□ -0.83
LMNA-222ENST00000508500 SMIM1B2RUZ4 78 aa9.86□□□□□ -0.83
LMNA-222ENST00000508500 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
LMNA-222ENST00000508500 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
LMNA-222ENST00000508500 IGLV7-43P04211 117 aa9.85□□□□□ -0.83
LMNA-222ENST00000508500 SPINK8P0C7L1 97 aa9.85□□□□□ -0.83
LMNA-222ENST00000508500 ZNF815PA8K554 130 aa9.84□□□□□ -0.83
LMNA-222ENST00000508500 NDUFC2-KCTD14E9PQ53 114 aa9.83□□□□□ -0.84
LMNA-222ENST00000508500 HERV-K104P63124 156 aa9.82□□□□□ -0.84
LMNA-222ENST00000508500 TAL2Q16559 108 aa9.82□□□□□ -0.84
LMNA-222ENST00000508500 LPAP08519 4548 aa9.81□□□□□ -0.84
LMNA-222ENST00000508500 M0QXV9 152 aa9.81□□□□□ -0.84
LMNA-222ENST00000508500 TSPEAR-AS2P59090 65 aa9.81□□□□□ -0.84
LMNA-222ENST00000508500 C2orf91Q6ZV80 131 aa9.81□□□□□ -0.84
LMNA-222ENST00000508500 Q8IZM0 81 aa9.81□□□□□ -0.84
LMNA-222ENST00000508500 TOMM7Q9P0U1 55 aa9.81□□□□□ -0.84
LMNA-222ENST00000508500 NDUFA12Q9UI09 145 aa9.81□□□□□ -0.84
LMNA-222ENST00000508500 CXCL5P42830 114 aa9.8□□□□□ -0.84
LMNA-222ENST00000508500 SCGB1D4Q6XE38 83 aa9.8□□□□□ -0.84
LMNA-222ENST00000508500 PRR26Q8N8Z3 221 aa9.8□□□□□ -0.84
LMNA-222ENST00000508500 COX7B2Q8TF08 81 aa9.8□□□□□ -0.84
LMNA-222ENST00000508500 LINC00587B1AMM8 73 aa9.79□□□□□ -0.84
LMNA-222ENST00000508500 H0Y9J4 135 aa9.79□□□□□ -0.84
LMNA-222ENST00000508500 TIMM17BO60830 172 aa9.79□□□□□ -0.84
LMNA-222ENST00000508500 TTTY13Q9BZ97 58 aa9.79□□□□□ -0.84
LMNA-222ENST00000508500 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
LMNA-222ENST00000508500 M0R143 59 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 PRSS2P07478 247 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 KRTAP1-4P0C5Y4 121 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 CTAG1AP78358 180 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 HSD52Q0P140 79 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 C6orf226Q5I0X4 101 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 Q6ZVH6 145 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 DIRC1Q969H9 104 aa9.78□□□□□ -0.84
LMNA-222ENST00000508500 CKS1BP61024 79 aa9.77□□□□□ -0.85
LMNA-222ENST00000508500 ZNF625Q96I27 306 aaPredicted RBP9.77□□□□□ -0.85
LMNA-222ENST00000508500 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
LMNA-222ENST00000508500 TMEM238C9JI98 176 aa9.76□□□□□ -0.85
LMNA-222ENST00000508500 UBE2BP63146 152 aa9.76□□□□□ -0.85
LMNA-222ENST00000508500 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
LMNA-222ENST00000508500 TP73-AS1Q9UF72 201 aa9.75□□□□□ -0.85
LMNA-222ENST00000508500 LBHQ53QV2 105 aaPredicted RBP9.74□□□□□ -0.85
LMNA-222ENST00000508500 PPDPFQ9H3Y8 114 aa9.74□□□□□ -0.85
LMNA-222ENST00000508500 C22orf24Q9Y442 160 aa9.74□□□□□ -0.85
LMNA-222ENST00000508500 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
LMNA-222ENST00000508500 HIST1H4GQ99525 98 aa9.72□□□□□ -0.85
LMNA-222ENST00000508500 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
LMNA-222ENST00000508500 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
LMNA-222ENST00000508500 IFITM1P13164 125 aa9.71□□□□□ -0.86
LMNA-222ENST00000508500 COX17Q14061 63 aa9.71□□□□□ -0.86
LMNA-222ENST00000508500 CEND1Q8N111 149 aa9.71□□□□□ -0.86
LMNA-222ENST00000508500 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
LMNA-222ENST00000508500 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
LMNA-222ENST00000508500 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
LMNA-222ENST00000508500 A6NJY4 79 aa9.69□□□□□ -0.86
LMNA-222ENST00000508500 LITAFQ99732 161 aa9.69□□□□□ -0.86
LMNA-222ENST00000508500 SNHG12Q9BXW3 62 aa9.69□□□□□ -0.86
LMNA-222ENST00000508500 ZNF861PO60384 105 aa9.68□□□□□ -0.86
LMNA-222ENST00000508500 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
LMNA-222ENST00000508500 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
LMNA-222ENST00000508500 A6NDN8 102 aa9.67□□□□□ -0.86
LMNA-222ENST00000508500 RPL24P83731 157 aaKnown RBP9.67□□□□□ -0.86
LMNA-222ENST00000508500 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
LMNA-222ENST00000508500 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
LMNA-222ENST00000508500 COL5A1-AS1Q5SY13 56 aa9.65□□□□□ -0.86
LMNA-222ENST00000508500 LINC00167Q96N53 147 aa9.65□□□□□ -0.86
LMNA-222ENST00000508500 SMIM13P0DJ93 91 aa9.63□□□□□ -0.87
LMNA-222ENST00000508500 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
LMNA-222ENST00000508500 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
LMNA-222ENST00000508500 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
LMNA-222ENST00000508500 RPL37AP8A6NKH3 93 aa9.62□□□□□ -0.87
LMNA-222ENST00000508500 LINC00158P58513 81 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms