RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 LINC00588Q9Y4M8 146 aa11.73□□□□□ -0.53
SFXN1-208ENST00000507823 A0A087WYN8 130 aa11.73□□□□□ -0.53
SFXN1-208ENST00000507823 DNAH9Q9NYC9 4486 aa11.73□□□□□ -0.53
SFXN1-208ENST00000507823 ZNF561-AS1K7EIQ3 104 aa11.73□□□□□ -0.53
SFXN1-208ENST00000507823 BAALC-AS2P0C853 105 aa11.72□□□□□ -0.53
SFXN1-208ENST00000507823 A0A1B0GX51 115 aa11.71□□□□□ -0.53
SFXN1-208ENST00000507823 MDFIQ99750 246 aa11.71□□□□□ -0.53
SFXN1-208ENST00000507823 UPK3BQ9BT76 320 aa11.71□□□□□ -0.54
SFXN1-208ENST00000507823 MGAM2Q2M2H8 2515 aa11.7□□□□□ -0.54
SFXN1-208ENST00000507823 LINC00167Q96N53 147 aa11.7□□□□□ -0.54
SFXN1-208ENST00000507823 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
SFXN1-208ENST00000507823 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
SFXN1-208ENST00000507823 FAM240AA0A1B0GVK7 77 aa11.69□□□□□ -0.54
SFXN1-208ENST00000507823 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
SFXN1-208ENST00000507823 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
SFXN1-208ENST00000507823 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
SFXN1-208ENST00000507823 Q6ZRU5 148 aa11.68□□□□□ -0.54
SFXN1-208ENST00000507823 Q9HAA7 133 aa11.68□□□□□ -0.54
SFXN1-208ENST00000507823 NCR3O14931 201 aa11.67□□□□□ -0.54
SFXN1-208ENST00000507823 DNAL4O96015 105 aa11.66□□□□□ -0.54
SFXN1-208ENST00000507823 LECT2O14960 151 aa11.66□□□□□ -0.54
SFXN1-208ENST00000507823 DYNC2H1Q8NCM8 4307 aaKnown RBP11.66□□□□□ -0.54
SFXN1-208ENST00000507823 NDUFC2-KCTD14E9PQ53 114 aa11.65□□□□□ -0.54
SFXN1-208ENST00000507823 XGP55808 180 aa11.65□□□□□ -0.54
SFXN1-208ENST00000507823 S100A7L2Q5SY68 101 aa11.64□□□□□ -0.55
SFXN1-208ENST00000507823 OBSCN-AS1Q96MR7 158 aa11.63□□□□□ -0.55
SFXN1-208ENST00000507823 B9D2Q9BPU9 175 aa11.62□□□□□ -0.55
SFXN1-208ENST00000507823 VPREB1P12018 145 aa11.62□□□□□ -0.55
SFXN1-208ENST00000507823 Q8N814 137 aa11.62□□□□□ -0.55
SFXN1-208ENST00000507823 XAGE1AQ9HD64 81 aa11.62□□□□□ -0.55
SFXN1-208ENST00000507823 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
SFXN1-208ENST00000507823 C6orf99Q4VX62 202 aa11.61□□□□□ -0.55
SFXN1-208ENST00000507823 MT-ATP8P03928 68 aa11.61□□□□□ -0.55
SFXN1-208ENST00000507823 SYCNQ0VAF6 134 aa11.61□□□□□ -0.55
SFXN1-208ENST00000507823 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
SFXN1-208ENST00000507823 RMI2Q96E14 147 aa11.6□□□□□ -0.55
SFXN1-208ENST00000507823 ACYP1P07311 99 aa11.59□□□□□ -0.55
SFXN1-208ENST00000507823 TLX1NBP0CAT3 122 aa11.59□□□□□ -0.55
SFXN1-208ENST00000507823 ORMDL1Q9P0S3 153 aa11.59□□□□□ -0.55
SFXN1-208ENST00000507823 LINC00575Q6W349 94 aa11.58□□□□□ -0.55
SFXN1-208ENST00000507823 Q6ZRP5 223 aa11.57□□□□□ -0.56
SFXN1-208ENST00000507823 TRBV10-3A0A0K0K1G6 114 aa11.57□□□□□ -0.56
SFXN1-208ENST00000507823 M0R378 163 aa11.56□□□□□ -0.56
SFXN1-208ENST00000507823 SLPIP03973 132 aa11.56□□□□□ -0.56
SFXN1-208ENST00000507823 TRAV23DV6A0A075B6W5 121 aa11.55□□□□□ -0.56
SFXN1-208ENST00000507823 TRBV7-6A0A0J9YX20 115 aa11.55□□□□□ -0.56
SFXN1-208ENST00000507823 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
SFXN1-208ENST00000507823 C21orf62-AS1Q17RA5 79 aa11.55□□□□□ -0.56
SFXN1-208ENST00000507823 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
SFXN1-208ENST00000507823 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
SFXN1-208ENST00000507823 CASC10Q5T4H9 136 aa11.54□□□□□ -0.56
SFXN1-208ENST00000507823 APLNQ9ULZ1 77 aa11.54□□□□□ -0.56
SFXN1-208ENST00000507823 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
SFXN1-208ENST00000507823 SNCGO76070 127 aa11.54□□□□□ -0.56
SFXN1-208ENST00000507823 COL7A1Q02388 2944 aa11.53□□□□□ -0.56
SFXN1-208ENST00000507823 PLA2G2DQ9UNK4 145 aa11.53□□□□□ -0.56
SFXN1-208ENST00000507823 TMEM256-PLSCR3K7ERE1 68 aa11.52□□□□□ -0.57
SFXN1-208ENST00000507823 DIRC1Q969H9 104 aa11.52□□□□□ -0.57
SFXN1-208ENST00000507823 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
SFXN1-208ENST00000507823 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
SFXN1-208ENST00000507823 hADV29S1A0JD25 119 aa11.51□□□□□ -0.57
SFXN1-208ENST00000507823 ZNF73O43830 326 aaPredicted RBP11.51□□□□□ -0.57
SFXN1-208ENST00000507823 NHLRC4P0CG21 123 aaPredicted RBP11.49□□□□□ -0.57
SFXN1-208ENST00000507823 ELOF1P60002 83 aaKnown RBP11.49□□□□□ -0.57
SFXN1-208ENST00000507823 KRTAP21-3Q3LHN1 58 aa11.49□□□□□ -0.57
SFXN1-208ENST00000507823 Q6Q795 121 aa11.49□□□□□ -0.57
SFXN1-208ENST00000507823 JMJD7-PLA2G4BH0Y9G9 81 aa11.48□□□□□ -0.57
SFXN1-208ENST00000507823 H3BQ85 93 aa11.48□□□□□ -0.57
SFXN1-208ENST00000507823 IGLV5-37A0A075B6J1 123 aa11.47□□□□□ -0.57
SFXN1-208ENST00000507823 KRTAP1-5Q9BYS1 174 aa11.47□□□□□ -0.57
SFXN1-208ENST00000507823 C14orf132Q9NPU4 83 aa11.46□□□□□ -0.57
SFXN1-208ENST00000507823 COX7BP24311 80 aa11.46□□□□□ -0.58
SFXN1-208ENST00000507823 SERTAD4-AS1Q5TG53 156 aa11.44□□□□□ -0.58
SFXN1-208ENST00000507823 SMCR5Q8TEV8 140 aa11.44□□□□□ -0.58
SFXN1-208ENST00000507823 KCNQ1DNQ9H478 68 aa11.44□□□□□ -0.58
SFXN1-208ENST00000507823 GAGE2AQ6NT46 116 aa11.43□□□□□ -0.58
SFXN1-208ENST00000507823 TRBV7-7A0A0K0K1E9 115 aa11.43□□□□□ -0.58
SFXN1-208ENST00000507823 TTC32Q5I0X7 151 aa11.43□□□□□ -0.58
SFXN1-208ENST00000507823 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.43□□□□□ -0.58
SFXN1-208ENST00000507823 LINC00643Q86TS7 51 aa11.43□□□□□ -0.58
SFXN1-208ENST00000507823 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
SFXN1-208ENST00000507823 PLECQ15149 4684 aaKnown RBP11.42□□□□□ -0.58
SFXN1-208ENST00000507823 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
SFXN1-208ENST00000507823 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
SFXN1-208ENST00000507823 NUPR2A6NF83 97 aa11.4□□□□□ -0.58
SFXN1-208ENST00000507823 CCKP06307 115 aa11.4□□□□□ -0.58
SFXN1-208ENST00000507823 Q6ZQY7 126 aa11.4□□□□□ -0.58
SFXN1-208ENST00000507823 NKAPP1Q8N9T2 125 aa11.4□□□□□ -0.58
SFXN1-208ENST00000507823 UBE2DNLQ8IWF7 75 aa11.4□□□□□ -0.58
SFXN1-208ENST00000507823 LOC107984640A0A0U1RRK4 108 aa11.39□□□□□ -0.59
SFXN1-208ENST00000507823 DNAH7Q8WXX0 4024 aa11.39□□□□□ -0.59
SFXN1-208ENST00000507823 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
SFXN1-208ENST00000507823 KRTAP7-1Q8IUC3 87 aa11.39□□□□□ -0.59
SFXN1-208ENST00000507823 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
SFXN1-208ENST00000507823 DNAH10Q8IVF4 4471 aa11.38□□□□□ -0.59
SFXN1-208ENST00000507823 GHRHP01286 108 aa11.38□□□□□ -0.59
SFXN1-208ENST00000507823 LYSTQ99698 3801 aa11.38□□□□□ -0.59
SFXN1-208ENST00000507823 CSMD3Q7Z407 3707 aa11.37□□□□□ -0.59
SFXN1-208ENST00000507823 PRKDCP78527 4128 aaKnown RBP11.36□□□□□ -0.59
SFXN1-208ENST00000507823 LOC110117498A0A087WWA1 95 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms