RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 MT1HL1P0DM35 61 aa17.07■□□□□ 0.32
MSX2-202ENST00000507785 HERV-K104P63124 156 aa17.07■□□□□ 0.32
MSX2-202ENST00000507785 PLEKHB2Q96CS7 222 aa17.07■□□□□ 0.32
MSX2-202ENST00000507785 LINC00158P58513 81 aa17.06■□□□□ 0.32
MSX2-202ENST00000507785 LINC00167Q96N53 147 aa17.06■□□□□ 0.32
MSX2-202ENST00000507785 VPREB1P12018 145 aa17.05■□□□□ 0.32
MSX2-202ENST00000507785 HERVK_113P61574 105 aa17.05■□□□□ 0.32
MSX2-202ENST00000507785 LINC01545Q5VT33 79 aa17.05■□□□□ 0.32
MSX2-202ENST00000507785 MYMXA0A1B0GTQ4 84 aa17.04■□□□□ 0.32
MSX2-202ENST00000507785 SMIM13P0DJ93 91 aa17.04■□□□□ 0.32
MSX2-202ENST00000507785 PET117Q6UWS5 81 aa17.04■□□□□ 0.32
MSX2-202ENST00000507785 A0A0U1RRA0 63 aa17.03■□□□□ 0.32
MSX2-202ENST00000507785 J3QQQ9 107 aa17.03■□□□□ 0.32
MSX2-202ENST00000507785 NKAPP1Q8N9T2 125 aa17.03■□□□□ 0.32
MSX2-202ENST00000507785 Q8NDZ9 215 aa17.03■□□□□ 0.32
MSX2-202ENST00000507785 C3orf79P0CE67 100 aa17.02■□□□□ 0.32
MSX2-202ENST00000507785 REG3GQ6UW15 175 aa17.02■□□□□ 0.32
MSX2-202ENST00000507785 LINC01600Q96MT4 127 aa17.02■□□□□ 0.32
MSX2-202ENST00000507785 MEIG1Q5JSS6 88 aa17.01■□□□□ 0.31
MSX2-202ENST00000507785 GAGE10A6NGK3 116 aa17■□□□□ 0.31
MSX2-202ENST00000507785 RPL37AP8A6NKH3 93 aa16.99■□□□□ 0.31
MSX2-202ENST00000507785 LINC00587B1AMM8 73 aa16.98■□□□□ 0.31
MSX2-202ENST00000507785 E9PLD3 99 aa16.98■□□□□ 0.31
MSX2-202ENST00000507785 RPL24P83731 157 aaKnown RBP16.98■□□□□ 0.31
MSX2-202ENST00000507785 NMUP48645 174 aa16.97■□□□□ 0.31
MSX2-202ENST00000507785 MIR7-3HGQ8N6C7 128 aa16.97■□□□□ 0.31
MSX2-202ENST00000507785 DIRC1Q969H9 104 aa16.97■□□□□ 0.31
MSX2-202ENST00000507785 LGALS3P17931 250 aaKnown RBP16.96■□□□□ 0.31
MSX2-202ENST00000507785 H0Y9J4 135 aa16.95■□□□□ 0.3
MSX2-202ENST00000507785 KRTDAPP60985 99 aa16.94■□□□□ 0.3
MSX2-202ENST00000507785 BCE1O60756 84 aa16.93■□□□□ 0.3
MSX2-202ENST00000507785 ZNF861PO60384 105 aa16.92■□□□□ 0.3
MSX2-202ENST00000507785 IGLV1-50A0A075B6I6 118 aa16.91■□□□□ 0.3
MSX2-202ENST00000507785 IGKV2-28A0A075B6P5 120 aa16.9■□□□□ 0.3
MSX2-202ENST00000507785 IGKV2D-28P01615 120 aa16.9■□□□□ 0.3
MSX2-202ENST00000507785 KRTAP10-8P60410 259 aa16.89■□□□□ 0.29
MSX2-202ENST00000507785 BOD1L2Q8IYS8 172 aa16.87■□□□□ 0.29
MSX2-202ENST00000507785 HIST3H2BBQ8N257 126 aa16.87■□□□□ 0.29
MSX2-202ENST00000507785 DAND5Q8N907 189 aa16.87■□□□□ 0.29
MSX2-202ENST00000507785 LOC107984156A0A0G2JMH3 177 aa16.86■□□□□ 0.29
MSX2-202ENST00000507785 ARL17AQ8IVW1 177 aa16.86■□□□□ 0.29
MSX2-202ENST00000507785 A0A0J9YXY3 114 aa16.85■□□□□ 0.29
MSX2-202ENST00000507785 IGKV2D-26A0A0A0MRZ7 120 aa16.84■□□□□ 0.29
MSX2-202ENST00000507785 M0R378 163 aa16.84■□□□□ 0.29
MSX2-202ENST00000507785 KRTAP13-1Q8IUC0 172 aa16.84■□□□□ 0.29
MSX2-202ENST00000507785 C20orf202A1L168 122 aa16.83■□□□□ 0.28
MSX2-202ENST00000507785 KRTAP1-4P0C5Y4 121 aa16.83■□□□□ 0.28
MSX2-202ENST00000507785 RPL28P46779 137 aaKnown RBP16.83■□□□□ 0.28
MSX2-202ENST00000507785 HMCN2Q8NDA2 5059 aa16.83■□□□□ 0.28
MSX2-202ENST00000507785 TMEM238C9JI98 176 aa16.82■□□□□ 0.28
MSX2-202ENST00000507785 HIST1H2BLQ99880 126 aa16.82■□□□□ 0.28
MSX2-202ENST00000507785 TMEM126AQ9H061 195 aa16.82■□□□□ 0.28
MSX2-202ENST00000507785 NCR3O14931 201 aa16.79■□□□□ 0.28
MSX2-202ENST00000507785 ADAMTSL4-AS1Q5T5F5 129 aa16.79■□□□□ 0.28
MSX2-202ENST00000507785 S100A2P29034 98 aa16.77■□□□□ 0.28
MSX2-202ENST00000507785 TTTY13Q9BZ97 58 aa16.77■□□□□ 0.28
MSX2-202ENST00000507785 S100A6P06703 90 aa16.76■□□□□ 0.27
MSX2-202ENST00000507785 UBE2AP49459 152 aa16.76■□□□□ 0.27
MSX2-202ENST00000507785 ANKRD39Q53RE8 183 aa16.75■□□□□ 0.27
MSX2-202ENST00000507785 SOSTDC1Q6X4U4 206 aa16.75■□□□□ 0.27
MSX2-202ENST00000507785 ATOH7Q8N100 152 aa16.75■□□□□ 0.27
MSX2-202ENST00000507785 PRR26Q8N8Z3 221 aa16.75■□□□□ 0.27
MSX2-202ENST00000507785 LITAFQ99732 161 aa16.75■□□□□ 0.27
MSX2-202ENST00000507785 ZNF815PA8K554 130 aa16.74■□□□□ 0.27
MSX2-202ENST00000507785 EIF4EBP3O60516 100 aaPredicted RBP16.74■□□□□ 0.27
MSX2-202ENST00000507785 AKR1D1P51857 326 aa16.74■□□□□ 0.27
MSX2-202ENST00000507785 TIMM17BO60830 172 aa16.73■□□□□ 0.27
MSX2-202ENST00000507785 PRLHP81277 87 aa16.72■□□□□ 0.27
MSX2-202ENST00000507785 FAM19A1Q7Z5A9 133 aa16.72■□□□□ 0.27
MSX2-202ENST00000507785 MIEN1Q9BRT3 115 aa16.72■□□□□ 0.27
MSX2-202ENST00000507785 TRBV10-2A0A0K0K1G8 114 aa16.71■□□□□ 0.27
MSX2-202ENST00000507785 NDUFC2O95298 119 aa16.7■□□□□ 0.26
MSX2-202ENST00000507785 SNRPEP62304 92 aaKnown RBP16.7■□□□□ 0.26
MSX2-202ENST00000507785 KCNQ1DNQ9H478 68 aa16.7■□□□□ 0.26
MSX2-202ENST00000507785 TRBV10-3A0A0K0K1G6 114 aa16.69■□□□□ 0.26
MSX2-202ENST00000507785 PRYO14603 147 aa16.69■□□□□ 0.26
MSX2-202ENST00000507785 NPC2P61916 151 aa16.69■□□□□ 0.26
MSX2-202ENST00000507785 SPANXB1Q9NS25 103 aaPredicted RBP16.69■□□□□ 0.26
MSX2-202ENST00000507785 SPRR1AP35321 89 aa16.68■□□□□ 0.26
MSX2-202ENST00000507785 C5orf52A6NGY3 159 aa16.66■□□□□ 0.26
MSX2-202ENST00000507785 LINC00308Q8TCZ7 52 aa16.65■□□□□ 0.26
MSX2-202ENST00000507785 KRTAP4-16G5E9R7 235 aaPredicted RBP16.63■□□□□ 0.25
MSX2-202ENST00000507785 LINC00337Q8N6G1 96 aa16.63■□□□□ 0.25
MSX2-202ENST00000507785 DDTP30046 118 aa16.62■□□□□ 0.25
MSX2-202ENST00000507785 PCP2Q8IVA1 136 aa16.62■□□□□ 0.25
MSX2-202ENST00000507785 IGLV6-57P01721 117 aa16.6■□□□□ 0.25
MSX2-202ENST00000507785 RPL13AP40429 203 aaKnown RBP16.6■□□□□ 0.25
MSX2-202ENST00000507785 A0A087X002 238 aa16.58■□□□□ 0.24
MSX2-202ENST00000507785 SCGB1D4Q6XE38 83 aa16.58■□□□□ 0.24
MSX2-202ENST00000507785 SPANXCQ9NY87 97 aa16.58■□□□□ 0.24
MSX2-202ENST00000507785 HIGD2AQ9BW72 106 aa16.57■□□□□ 0.24
MSX2-202ENST00000507785 SPANXDQ9BXN6 97 aa16.57■□□□□ 0.24
MSX2-202ENST00000507785 ANAPC11Q9NYG5 84 aa16.57■□□□□ 0.24
MSX2-202ENST00000507785 S100A12P80511 92 aa16.56■□□□□ 0.24
MSX2-202ENST00000507785 ETDCA0A1B0GVM5 59 aa16.55■□□□□ 0.24
MSX2-202ENST00000507785 S100A7L2Q5SY68 101 aa16.55■□□□□ 0.24
MSX2-202ENST00000507785 CRYGAP11844 174 aa16.53■□□□□ 0.24
MSX2-202ENST00000507785 B5MCH6 92 aa16.52■□□□□ 0.24
MSX2-202ENST00000507785 FAM229BQ4G0N7 80 aa16.52■□□□□ 0.24
MSX2-202ENST00000507785 HSBP1L1C9JCN9 74 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms