RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 Q8NBF4 154 aa13.02□□□□□ -0.33
CALCOCO2-209ENST00000507076 TRAV9-1A0A075B6T8 112 aa13.01□□□□□ -0.33
CALCOCO2-209ENST00000507076 ASB16-AS1Q495Z4 193 aa13.01□□□□□ -0.33
CALCOCO2-209ENST00000507076 LINC01547P58512 204 aaPredicted RBP13□□□□□ -0.33
CALCOCO2-209ENST00000507076 KRTAP4-1Q9BYQ7 146 aa13□□□□□ -0.33
CALCOCO2-209ENST00000507076 ZNF706Q9Y5V0 76 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO2-209ENST00000507076 A0A096LNJ9 63 aa12.97□□□□□ -0.33
CALCOCO2-209ENST00000507076 A0A0U1RRA0 63 aa12.96□□□□□ -0.33
CALCOCO2-209ENST00000507076 LINC00158P58513 81 aa12.96□□□□□ -0.33
CALCOCO2-209ENST00000507076 C11orf86A6NJI1 115 aa12.95□□□□□ -0.34
CALCOCO2-209ENST00000507076 S100PP25815 95 aa12.95□□□□□ -0.34
CALCOCO2-209ENST00000507076 FABP9Q0Z7S8 132 aa12.94□□□□□ -0.34
CALCOCO2-209ENST00000507076 TMEM170BQ5T4T1 132 aa12.94□□□□□ -0.34
CALCOCO2-209ENST00000507076 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
CALCOCO2-209ENST00000507076 PMCHL1Q16048 86 aa12.92□□□□□ -0.34
CALCOCO2-209ENST00000507076 PRYO14603 147 aa12.91□□□□□ -0.34
CALCOCO2-209ENST00000507076 SEC61BP60468 96 aaKnown RBP12.91□□□□□ -0.34
CALCOCO2-209ENST00000507076 LCE2DQ5TA82 110 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO2-209ENST00000507076 SMCR5Q8TEV8 140 aa12.91□□□□□ -0.34
CALCOCO2-209ENST00000507076 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
CALCOCO2-209ENST00000507076 NCR3O14931 201 aa12.9□□□□□ -0.34
CALCOCO2-209ENST00000507076 SPINK1P00995 79 aa12.9□□□□□ -0.34
CALCOCO2-209ENST00000507076 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
CALCOCO2-209ENST00000507076 HBDP02042 147 aa12.89□□□□□ -0.35
CALCOCO2-209ENST00000507076 COX19Q49B96 90 aa12.89□□□□□ -0.35
CALCOCO2-209ENST00000507076 TMEM218A2RU14 115 aa12.87□□□□□ -0.35
CALCOCO2-209ENST00000507076 BOD1L2Q8IYS8 172 aa12.87□□□□□ -0.35
CALCOCO2-209ENST00000507076 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
CALCOCO2-209ENST00000507076 SPRR1AP35321 89 aa12.86□□□□□ -0.35
CALCOCO2-209ENST00000507076 CLLU1Q5K131 121 aa12.86□□□□□ -0.35
CALCOCO2-209ENST00000507076 LINC00614P0C842 121 aa12.85□□□□□ -0.35
CALCOCO2-209ENST00000507076 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
CALCOCO2-209ENST00000507076 C18orf32Q8TCD1 76 aa12.85□□□□□ -0.35
CALCOCO2-209ENST00000507076 KRTAP4-16G5E9R7 235 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO2-209ENST00000507076 MOBPQ13875 183 aa12.84□□□□□ -0.35
CALCOCO2-209ENST00000507076 LINC00483Q53H64 154 aa12.84□□□□□ -0.35
CALCOCO2-209ENST00000507076 GAGE2AQ6NT46 116 aa12.84□□□□□ -0.35
CALCOCO2-209ENST00000507076 KCNQ1DNQ9H478 68 aa12.84□□□□□ -0.35
CALCOCO2-209ENST00000507076 NDUFA12Q9UI09 145 aa12.84□□□□□ -0.35
CALCOCO2-209ENST00000507076 IGLV9-49A0A0B4J1Y8 123 aa12.83□□□□□ -0.36
CALCOCO2-209ENST00000507076 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
CALCOCO2-209ENST00000507076 SEC11CQ9BY50 192 aa12.83□□□□□ -0.36
CALCOCO2-209ENST00000507076 UQCC3Q6UW78 93 aa12.82□□□□□ -0.36
CALCOCO2-209ENST00000507076 Q8N377 158 aa12.82□□□□□ -0.36
CALCOCO2-209ENST00000507076 CRCT1Q9UGL9 99 aa12.82□□□□□ -0.36
CALCOCO2-209ENST00000507076 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
CALCOCO2-209ENST00000507076 FSIP2Q5CZC0 6907 aa12.81□□□□□ -0.36
CALCOCO2-209ENST00000507076 TRBV10-3A0A0K0K1G6 114 aa12.81□□□□□ -0.36
CALCOCO2-209ENST00000507076 TMEM223A0PJW6 202 aa12.81□□□□□ -0.36
CALCOCO2-209ENST00000507076 MEIG1Q5JSS6 88 aa12.81□□□□□ -0.36
CALCOCO2-209ENST00000507076 FAM19A2Q8N3H0 131 aa12.8□□□□□ -0.36
CALCOCO2-209ENST00000507076 MIR7-3HGQ8N6C7 128 aa12.8□□□□□ -0.36
CALCOCO2-209ENST00000507076 ERC2-IT1O76042 136 aa12.78□□□□□ -0.36
CALCOCO2-209ENST00000507076 RPS29P62273 56 aaKnown RBP12.77□□□□□ -0.37
CALCOCO2-209ENST00000507076 TRAPPC1Q9Y5R8 145 aa12.77□□□□□ -0.37
CALCOCO2-209ENST00000507076 B5MCH6 92 aa12.75□□□□□ -0.37
CALCOCO2-209ENST00000507076 XP32Q5T750 250 aa12.75□□□□□ -0.37
CALCOCO2-209ENST00000507076 RPS10P5Q9NQ39 176 aa12.75□□□□□ -0.37
CALCOCO2-209ENST00000507076 SLC25A20O43772 301 aa12.74□□□□□ -0.37
CALCOCO2-209ENST00000507076 SSBP3-AS1Q7Z2R9 100 aa12.74□□□□□ -0.37
CALCOCO2-209ENST00000507076 LCE2CQ5TA81 110 aa12.73□□□□□ -0.37
CALCOCO2-209ENST00000507076 S100A12P80511 92 aa12.72□□□□□ -0.37
CALCOCO2-209ENST00000507076 HERV-K104P63124 156 aa12.71□□□□□ -0.37
CALCOCO2-209ENST00000507076 Q9BRP9 147 aa12.71□□□□□ -0.37
CALCOCO2-209ENST00000507076 RHEBQ15382 184 aa12.7□□□□□ -0.38
CALCOCO2-209ENST00000507076 TRAV12-1A0A0B4J245 112 aa12.69□□□□□ -0.38
CALCOCO2-209ENST00000507076 DDTP30046 118 aa12.68□□□□□ -0.38
CALCOCO2-209ENST00000507076 IFI27L1Q96BM0 104 aa12.68□□□□□ -0.38
CALCOCO2-209ENST00000507076 C9orf153Q5TBE3 101 aa12.67□□□□□ -0.38
CALCOCO2-209ENST00000507076 Q6ZRX8 168 aa12.67□□□□□ -0.38
CALCOCO2-209ENST00000507076 MAP1LC3CQ9BXW4 147 aa12.66□□□□□ -0.38
CALCOCO2-209ENST00000507076 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.38
CALCOCO2-209ENST00000507076 LINC00587B1AMM8 73 aa12.65□□□□□ -0.38
CALCOCO2-209ENST00000507076 KRTAP19-2Q3LHN2 52 aa12.65□□□□□ -0.38
CALCOCO2-209ENST00000507076 COMMD7Q86VX2 200 aa12.65□□□□□ -0.38
CALCOCO2-209ENST00000507076 C10orf91Q5T1B1 145 aa12.64□□□□□ -0.39
CALCOCO2-209ENST00000507076 IFITM2Q01629 132 aa12.63□□□□□ -0.39
CALCOCO2-209ENST00000507076 TSPEAR-AS2P59090 65 aa12.62□□□□□ -0.39
CALCOCO2-209ENST00000507076 TRBV10-2A0A0K0K1G8 114 aa12.61□□□□□ -0.39
CALCOCO2-209ENST00000507076 MT1HP80294 61 aa12.61□□□□□ -0.39
CALCOCO2-209ENST00000507076 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
CALCOCO2-209ENST00000507076 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
CALCOCO2-209ENST00000507076 CHCHD1Q96BP2 118 aaKnown RBP12.59□□□□□ -0.39
CALCOCO2-209ENST00000507076 H0Y8G0 127 aa12.58□□□□□ -0.4
CALCOCO2-209ENST00000507076 PCOTHQ58A44 107 aa12.58□□□□□ -0.4
CALCOCO2-209ENST00000507076 SPANXB1Q9NS25 103 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO2-209ENST00000507076 S100A7L2Q5SY68 101 aa12.57□□□□□ -0.4
CALCOCO2-209ENST00000507076 ST20-AS1Q8NBB2 130 aa12.57□□□□□ -0.4
CALCOCO2-209ENST00000507076 IGLV8-61A0A075B6I0 122 aa12.56□□□□□ -0.4
CALCOCO2-209ENST00000507076 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
CALCOCO2-209ENST00000507076 IGLV6-57P01721 117 aa12.55□□□□□ -0.4
CALCOCO2-209ENST00000507076 JOSD1Q15040 202 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO2-209ENST00000507076 MIEN1Q9BRT3 115 aa12.55□□□□□ -0.4
CALCOCO2-209ENST00000507076 C9orf92A6NGG3 77 aa12.54□□□□□ -0.4
CALCOCO2-209ENST00000507076 LEPROTO15243 131 aa12.54□□□□□ -0.4
CALCOCO2-209ENST00000507076 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
CALCOCO2-209ENST00000507076 HRCT1Q6UXD1 115 aa12.52□□□□□ -0.41
CALCOCO2-209ENST00000507076 ZNF73O43830 326 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-209ENST00000507076 HSBP1O75506 76 aa12.5□□□□□ -0.41
CALCOCO2-209ENST00000507076 NDUFC2O95298 119 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms