RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 A0A0A0MQY5 61 aa5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 TRAV12-1A0A0B4J245 112 aa5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 RPL37AP8A6NKH3 93 aa5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 VPREB1P12018 145 aa5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 PFN2P35080 140 aa5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 RPL13AP40429 203 aaKnown RBP5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 RPL28P46779 137 aaKnown RBP5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 COX17Q14061 63 aa5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 ZNF625Q96I27 306 aaPredicted RBP5.4□□□□□ -1.54
PDLIM5-209ENST00000506632 TMEM170BQ5T4T1 132 aa5.39□□□□□ -1.55
PDLIM5-209ENST00000506632 SFTA2Q6UW10 78 aa5.39□□□□□ -1.55
PDLIM5-209ENST00000506632 CBLN2Q8IUK8 224 aa5.39□□□□□ -1.55
PDLIM5-209ENST00000506632 NKAPP1Q8N9T2 125 aa5.39□□□□□ -1.55
PDLIM5-209ENST00000506632 IFI27L1Q96BM0 104 aa5.39□□□□□ -1.55
PDLIM5-209ENST00000506632 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
PDLIM5-209ENST00000506632 CHTOPQ9Y3Y2 248 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-209ENST00000506632 TMEM223A0PJW6 202 aa5.38□□□□□ -1.55
PDLIM5-209ENST00000506632 SCO1O75880 301 aa5.38□□□□□ -1.55
PDLIM5-209ENST00000506632 Q8NDZ9 215 aa5.38□□□□□ -1.55
PDLIM5-209ENST00000506632 A0A087X002 238 aa5.37□□□□□ -1.55
PDLIM5-209ENST00000506632 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
PDLIM5-209ENST00000506632 IGKV2-28A0A075B6P5 120 aa5.36□□□□□ -1.55
PDLIM5-209ENST00000506632 IGKV2D-28P01615 120 aa5.36□□□□□ -1.55
PDLIM5-209ENST00000506632 RPL24P83731 157 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-209ENST00000506632 HSBP1O75506 76 aa5.35□□□□□ -1.55
PDLIM5-209ENST00000506632 TRGC2P03986 189 aa5.35□□□□□ -1.55
PDLIM5-209ENST00000506632 FAM19A2Q8N3H0 131 aa5.35□□□□□ -1.55
PDLIM5-209ENST00000506632 TMEM238C9JI98 176 aa5.34□□□□□ -1.55
PDLIM5-209ENST00000506632 M0R378 163 aa5.34□□□□□ -1.55
PDLIM5-209ENST00000506632 CRYGAP11844 174 aa5.34□□□□□ -1.55
PDLIM5-209ENST00000506632 UBE2AP49459 152 aa5.34□□□□□ -1.55
PDLIM5-209ENST00000506632 KRTAP13-2Q52LG2 175 aa5.34□□□□□ -1.55
PDLIM5-209ENST00000506632 TMEM126AQ9H061 195 aa5.34□□□□□ -1.55
PDLIM5-209ENST00000506632 LPAP08519 4548 aa5.34□□□□□ -1.56
PDLIM5-209ENST00000506632 SERF1AO75920 110 aa5.33□□□□□ -1.56
PDLIM5-209ENST00000506632 LINC00158P58513 81 aa5.33□□□□□ -1.56
PDLIM5-209ENST00000506632 PRLHP81277 87 aa5.33□□□□□ -1.56
PDLIM5-209ENST00000506632 FAM229BQ4G0N7 80 aa5.33□□□□□ -1.56
PDLIM5-209ENST00000506632 ANAPC11Q9NYG5 84 aa5.33□□□□□ -1.56
PDLIM5-209ENST00000506632 A0A0U1RRA0 63 aa5.32□□□□□ -1.56
PDLIM5-209ENST00000506632 LEPROTL1O95214 131 aa5.32□□□□□ -1.56
PDLIM5-209ENST00000506632 HERV-K104P63124 156 aa5.32□□□□□ -1.56
PDLIM5-209ENST00000506632 FAM19A1Q7Z5A9 133 aa5.32□□□□□ -1.56
PDLIM5-209ENST00000506632 SLC7A5P1Q8MH63 180 aa5.32□□□□□ -1.56
PDLIM5-209ENST00000506632 TYMSOSQ8TAI1 123 aa5.32□□□□□ -1.56
PDLIM5-209ENST00000506632 COLCA2A8K830 154 aa5.31□□□□□ -1.56
PDLIM5-209ENST00000506632 SMIM13P0DJ93 91 aa5.31□□□□□ -1.56
PDLIM5-209ENST00000506632 TSPEAR-AS2P59090 65 aa5.31□□□□□ -1.56
PDLIM5-209ENST00000506632 NDUFA12Q9UI09 145 aa5.31□□□□□ -1.56
PDLIM5-209ENST00000506632 MEIG1Q5JSS6 88 aa5.3□□□□□ -1.56
PDLIM5-209ENST00000506632 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
PDLIM5-209ENST00000506632 PLEKHB2Q96CS7 222 aa5.3□□□□□ -1.56
PDLIM5-209ENST00000506632 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 MYMXA0A1B0GTQ4 84 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 LINC00587B1AMM8 73 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 H0Y8G0 127 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 LEPROTO15243 131 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 TSPAN13O95857 204 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 PLNP26678 52 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 SPRR1AP35321 89 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 PRR4Q16378 134 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 BOD1L2Q8IYS8 172 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 HSPB8Q9UJY1 196 aa5.29□□□□□ -1.56
PDLIM5-209ENST00000506632 IGKV2D-26A0A0A0MRZ7 120 aa5.28□□□□□ -1.56
PDLIM5-209ENST00000506632 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-209ENST00000506632 ATP6V1G1O75348 118 aa5.28□□□□□ -1.56
PDLIM5-209ENST00000506632 KCNQ1DNQ9H478 68 aa5.28□□□□□ -1.56
PDLIM5-209ENST00000506632 J3QQQ9 107 aa5.27□□□□□ -1.57
PDLIM5-209ENST00000506632 DPM2O94777 84 aa5.27□□□□□ -1.57
PDLIM5-209ENST00000506632 FABP4P15090 132 aa5.27□□□□□ -1.57
PDLIM5-209ENST00000506632 CTAG1AP78358 180 aa5.27□□□□□ -1.57
PDLIM5-209ENST00000506632 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
PDLIM5-209ENST00000506632 MAP1LC3CQ9BXW4 147 aa5.27□□□□□ -1.57
PDLIM5-209ENST00000506632 NCR3O14931 201 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 IGKCP01834 107 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 NMUP48645 174 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 C3orf22Q8N5N4 141 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 LINC00337Q8N6G1 96 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 SPRR4Q96PI1 79 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 PMCHL2Q9BQD1 86 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 HIGD2AQ9BW72 106 aa5.26□□□□□ -1.57
PDLIM5-209ENST00000506632 TRBV10-3A0A0K0K1G6 114 aa5.25□□□□□ -1.57
PDLIM5-209ENST00000506632 TRBV10-2A0A0K0K1G8 114 aa5.25□□□□□ -1.57
PDLIM5-209ENST00000506632 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
PDLIM5-209ENST00000506632 HERVK_113P61574 105 aa5.25□□□□□ -1.57
PDLIM5-209ENST00000506632 DAND5Q8N907 189 aa5.25□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BKO60814 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BJP06899 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BOP23527 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BBP33778 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BDP58876 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BCP62807 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST2H2BEQ16778 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BHQ93079 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BNQ99877 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 HIST1H2BMQ99879 126 aa5.24□□□□□ -1.57
PDLIM5-209ENST00000506632 E9PLD3 99 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms