RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SPINK6Q6UWN8 80 aa11.17□□□□□ -0.62
PDLIM7-216ENST00000506537 PET117Q6UWS5 81 aa11.17□□□□□ -0.62
PDLIM7-216ENST00000506537 Q8NDZ9 215 aa11.17□□□□□ -0.62
PDLIM7-216ENST00000506537 PLEKHB2Q96CS7 222 aa11.17□□□□□ -0.62
PDLIM7-216ENST00000506537 J3QQQ9 107 aa11.16□□□□□ -0.62
PDLIM7-216ENST00000506537 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
PDLIM7-216ENST00000506537 LINC00158P58513 81 aa11.16□□□□□ -0.62
PDLIM7-216ENST00000506537 HERVK_113P61574 105 aa11.16□□□□□ -0.62
PDLIM7-216ENST00000506537 TNXBP22105 4242 aa11.15□□□□□ -0.62
PDLIM7-216ENST00000506537 IGLV7-43P04211 117 aa11.15□□□□□ -0.62
PDLIM7-216ENST00000506537 VPREB1P12018 145 aa11.15□□□□□ -0.62
PDLIM7-216ENST00000506537 HERV-K104P63124 156 aa11.15□□□□□ -0.62
PDLIM7-216ENST00000506537 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
PDLIM7-216ENST00000506537 LINC00167Q96N53 147 aa11.15□□□□□ -0.62
PDLIM7-216ENST00000506537 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
PDLIM7-216ENST00000506537 MEIG1Q5JSS6 88 aa11.14□□□□□ -0.63
PDLIM7-216ENST00000506537 GAGE10A6NGK3 116 aa11.13□□□□□ -0.63
PDLIM7-216ENST00000506537 KRTDAPP60985 99 aa11.13□□□□□ -0.63
PDLIM7-216ENST00000506537 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
PDLIM7-216ENST00000506537 RPL37AP8A6NKH3 93 aa11.12□□□□□ -0.63
PDLIM7-216ENST00000506537 E9PLD3 99 aa11.12□□□□□ -0.63
PDLIM7-216ENST00000506537 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
PDLIM7-216ENST00000506537 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-216ENST00000506537 MIR7-3HGQ8N6C7 128 aa11.11□□□□□ -0.63
PDLIM7-216ENST00000506537 NMUP48645 174 aa11.1□□□□□ -0.63
PDLIM7-216ENST00000506537 HIST3H2BBQ8N257 126 aa11.1□□□□□ -0.63
PDLIM7-216ENST00000506537 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
PDLIM7-216ENST00000506537 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
PDLIM7-216ENST00000506537 DAND5Q8N907 189 aa11.07□□□□□ -0.64
PDLIM7-216ENST00000506537 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
PDLIM7-216ENST00000506537 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
PDLIM7-216ENST00000506537 IGKV2D-26A0A0A0MRZ7 120 aa11.06□□□□□ -0.64
PDLIM7-216ENST00000506537 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
PDLIM7-216ENST00000506537 REG3GQ6UW15 175 aa11.06□□□□□ -0.64
PDLIM7-216ENST00000506537 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
PDLIM7-216ENST00000506537 H0Y9J4 135 aa11.05□□□□□ -0.64
PDLIM7-216ENST00000506537 DIRC1Q969H9 104 aa11.05□□□□□ -0.64
PDLIM7-216ENST00000506537 IGLV1-50A0A075B6I6 118 aa11.04□□□□□ -0.64
PDLIM7-216ENST00000506537 A0A0J9YXY3 114 aa11.04□□□□□ -0.64
PDLIM7-216ENST00000506537 C20orf202A1L168 122 aa11.04□□□□□ -0.64
PDLIM7-216ENST00000506537 BCE1O60756 84 aa11.04□□□□□ -0.64
PDLIM7-216ENST00000506537 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
PDLIM7-216ENST00000506537 ATOH7Q8N100 152 aa11.03□□□□□ -0.64
PDLIM7-216ENST00000506537 TTTY13Q9BZ97 58 aa11.03□□□□□ -0.64
PDLIM7-216ENST00000506537 ZNF861PO60384 105 aa11.02□□□□□ -0.65
PDLIM7-216ENST00000506537 S100A2P29034 98 aa11.02□□□□□ -0.65
PDLIM7-216ENST00000506537 LOC107984156A0A0G2JMH3 177 aa11.01□□□□□ -0.65
PDLIM7-216ENST00000506537 TMEM238C9JI98 176 aa11.01□□□□□ -0.65
PDLIM7-216ENST00000506537 S100A6P06703 90 aa11.01□□□□□ -0.65
PDLIM7-216ENST00000506537 ADAMTSL4-AS1Q5T5F5 129 aa11.01□□□□□ -0.65
PDLIM7-216ENST00000506537 ARL17AQ8IVW1 177 aa11.01□□□□□ -0.65
PDLIM7-216ENST00000506537 M0R378 163 aa11□□□□□ -0.65
PDLIM7-216ENST00000506537 NCR3O14931 201 aa11□□□□□ -0.65
PDLIM7-216ENST00000506537 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
PDLIM7-216ENST00000506537 KRTAP13-1Q8IUC0 172 aa11□□□□□ -0.65
PDLIM7-216ENST00000506537 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
PDLIM7-216ENST00000506537 KRTAP1-4P0C5Y4 121 aa10.99□□□□□ -0.65
PDLIM7-216ENST00000506537 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
PDLIM7-216ENST00000506537 SOSTDC1Q6X4U4 206 aa10.99□□□□□ -0.65
PDLIM7-216ENST00000506537 LITAFQ99732 161 aa10.99□□□□□ -0.65
PDLIM7-216ENST00000506537 TMEM126AQ9H061 195 aa10.99□□□□□ -0.65
PDLIM7-216ENST00000506537 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
PDLIM7-216ENST00000506537 ZNF815PA8K554 130 aa10.98□□□□□ -0.65
PDLIM7-216ENST00000506537 KRTAP10-8P60410 259 aa10.98□□□□□ -0.65
PDLIM7-216ENST00000506537 RPL28P46779 137 aaKnown RBP10.97□□□□□ -0.65
PDLIM7-216ENST00000506537 HMCN2Q8NDA2 5059 aa10.97□□□□□ -0.65
PDLIM7-216ENST00000506537 C5orf52A6NGY3 159 aa10.96□□□□□ -0.65
PDLIM7-216ENST00000506537 NPC2P61916 151 aa10.96□□□□□ -0.65
PDLIM7-216ENST00000506537 TIMM17BO60830 172 aa10.94□□□□□ -0.66
PDLIM7-216ENST00000506537 UBE2AP49459 152 aa10.94□□□□□ -0.66
PDLIM7-216ENST00000506537 AKR1D1P51857 326 aa10.94□□□□□ -0.66
PDLIM7-216ENST00000506537 PRLHP81277 87 aa10.94□□□□□ -0.66
PDLIM7-216ENST00000506537 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
PDLIM7-216ENST00000506537 TRBV10-3A0A0K0K1G6 114 aa10.93□□□□□ -0.66
PDLIM7-216ENST00000506537 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
PDLIM7-216ENST00000506537 PRR26Q8N8Z3 221 aa10.93□□□□□ -0.66
PDLIM7-216ENST00000506537 PCP2Q8IVA1 136 aa10.92□□□□□ -0.66
PDLIM7-216ENST00000506537 TRBV10-2A0A0K0K1G8 114 aa10.91□□□□□ -0.66
PDLIM7-216ENST00000506537 PRYO14603 147 aa10.91□□□□□ -0.66
PDLIM7-216ENST00000506537 NDUFC2O95298 119 aa10.91□□□□□ -0.66
PDLIM7-216ENST00000506537 KCNQ1DNQ9H478 68 aa10.91□□□□□ -0.66
PDLIM7-216ENST00000506537 SPANXB1Q9NS25 103 aaPredicted RBP10.91□□□□□ -0.66
PDLIM7-216ENST00000506537 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.66
PDLIM7-216ENST00000506537 SPRR1AP35321 89 aa10.89□□□□□ -0.67
PDLIM7-216ENST00000506537 DDTP30046 118 aa10.88□□□□□ -0.67
PDLIM7-216ENST00000506537 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
PDLIM7-216ENST00000506537 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
PDLIM7-216ENST00000506537 IGLV6-57P01721 117 aa10.86□□□□□ -0.67
PDLIM7-216ENST00000506537 SPANXDQ9BXN6 97 aa10.86□□□□□ -0.67
PDLIM7-216ENST00000506537 SPANXCQ9NY87 97 aa10.86□□□□□ -0.67
PDLIM7-216ENST00000506537 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
PDLIM7-216ENST00000506537 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
PDLIM7-216ENST00000506537 ANAPC11Q9NYG5 84 aa10.84□□□□□ -0.67
PDLIM7-216ENST00000506537 A0A087X002 238 aa10.83□□□□□ -0.68
PDLIM7-216ENST00000506537 S100A7L2Q5SY68 101 aa10.83□□□□□ -0.68
PDLIM7-216ENST00000506537 HIGD2AQ9BW72 106 aa10.83□□□□□ -0.68
PDLIM7-216ENST00000506537 HSBP1L1C9JCN9 74 aa10.82□□□□□ -0.68
PDLIM7-216ENST00000506537 ETDCA0A1B0GVM5 59 aa10.81□□□□□ -0.68
PDLIM7-216ENST00000506537 RPL13AP40429 203 aaKnown RBP10.8□□□□□ -0.68
PDLIM7-216ENST00000506537 TRAV23DV6A0A075B6W5 121 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms