RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 APOC2P02655 101 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 UBE2G1P62253 170 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 PPP3R1P63098 170 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 DCDP81605 110 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 ZNF56Q15929 161 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 C6orf52Q5T4I8 152 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 ZNF720Q7Z2F6 126 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 BET1LQ9NYM9 111 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 PCLOQ9Y6V0 5065 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 CUBNO60494 3623 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 EPPK1P58107 5090 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 NCOA6Q14686 2063 aaPredicted RBP1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 A0A1W2PPM0 123 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 GNG4P50150 75 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 GNG2P59768 71 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 KLKP1Q107X0 134 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 NCMAPQ5T1S8 102 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 GTF2H5Q6ZYL4 71 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 SPANXDQ9BXN6 97 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 VPS13CQ709C8 3753 aa1.28□□□□□ -2.2
TRAPPC13-208ENST00000505553 TRBV10-3A0A0K0K1G6 114 aa1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 TMEM218A2RU14 115 aa1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 M0R143 59 aa1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 TPPP2P59282 170 aa1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 S100A7L2Q5SY68 101 aa1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 C8orf59Q8N0T1 100 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 LSM10Q969L4 123 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 ANK3Q12955 4377 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-208ENST00000505553 S100A10P60903 97 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 NPC2P61916 151 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 PKIAP61925 76 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 SNRPFP62306 86 aaKnown RBP1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 DEFB110Q30KQ9 67 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 C4orf33Q8N1A6 199 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 C10orf82Q8WW14 230 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 USF3Q68DE3 2245 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 ZANQ9Y493 2812 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 HYDINQ4G0P3 5121 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 NINQ8N4C6 2090 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 ABCA1O95477 2261 aa1.26□□□□□ -2.21
TRAPPC13-208ENST00000505553 SVEP1Q4LDE5 3571 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 PRKDCP78527 4128 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 TRAV30A0A087WSZ9 112 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 UQCRHLA0A096LP55 91 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 SSBP1Q04837 148 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 CATR1Q13166 79 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 FAM74A4Q5TZK3 123 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 DEFB106AQ8N104 65 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 SPTSSBQ8NFR3 76 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 LCN9Q8WX39 176 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 TMEM14BQ9NUH8 114 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 ANKRD36A6QL64 1941 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 TENM3Q9P273 2699 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 RYR2Q92736 4967 aa1.25□□□□□ -2.21
TRAPPC13-208ENST00000505553 RBAKDNA6NC62 111 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 CCL3L1P16619 93 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 CCL8P80075 99 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 SPINK13Q1W4C9 94 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 MRPL54Q6P161 138 aaKnown RBP1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 ZNF818PQ6ZRF7 136 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 C20orf197Q8N268 126 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 Q8N6K4 173 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 ACBD7Q8N6N7 88 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 Q8N8P6 123 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 COX14Q96I36 57 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 FAIMQ9NVQ4 179 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 IER3IP1Q9Y5U9 82 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 HRNRQ86YZ3 2850 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 RYR1P21817 5038 aa1.24□□□□□ -2.21
TRAPPC13-208ENST00000505553 DEFB108AA8MXU0 73 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 FXYD6P3P58550 94 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 HSD52Q0P140 79 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 C9orf153Q5TBE3 101 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 SVBPQ8N300 66 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 DSCR8Q96T75 97 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 Q9H521 79 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 FLG2Q5D862 2391 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 HERC2O95714 4834 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 VWFP04275 2813 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 ROS1P08922 2347 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 PVALEFA0A1B0GWK0 134 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 SPINK8P0C7L1 97 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 SPINT3P49223 89 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 UBE2D1P51668 147 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 DEFB121Q5J5C9 76 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 COX7B2Q8TF08 81 aa1.23□□□□□ -2.21
TRAPPC13-208ENST00000505553 TRRAPQ9Y4A5 3859 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 UBR4Q5T4S7 5183 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 STAB2Q8WWQ8 2551 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 TRBV7-1A0A0A6YYK4 115 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 LCE6AA0A183 80 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 MPC2O95563 127 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 IFITM1P13164 125 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 ELOF1P60002 83 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 UBA52P62987 128 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 RBM3P98179 157 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 COL5A1-AS1Q5SY13 56 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 PLAC4Q8WY50 150 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms