RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 VPREB1P12018 145 aa9.35□□□□□ -0.91
PDLIM7-213ENST00000505074 S100A1P23297 94 aa9.35□□□□□ -0.91
PDLIM7-213ENST00000505074 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
PDLIM7-213ENST00000505074 BAGE3Q86Y29 109 aa9.35□□□□□ -0.91
PDLIM7-213ENST00000505074 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
PDLIM7-213ENST00000505074 COX17Q14061 63 aa9.34□□□□□ -0.91
PDLIM7-213ENST00000505074 FAM229BQ4G0N7 80 aa9.34□□□□□ -0.91
PDLIM7-213ENST00000505074 LINC00304Q8N9R0 145 aa9.34□□□□□ -0.91
PDLIM7-213ENST00000505074 URB1-AS1Q96HZ7 61 aa9.34□□□□□ -0.91
PDLIM7-213ENST00000505074 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
PDLIM7-213ENST00000505074 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
PDLIM7-213ENST00000505074 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
PDLIM7-213ENST00000505074 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
PDLIM7-213ENST00000505074 LINC00158P58513 81 aa9.32□□□□□ -0.92
PDLIM7-213ENST00000505074 MUC17Q685J3 4493 aa9.32□□□□□ -0.92
PDLIM7-213ENST00000505074 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
PDLIM7-213ENST00000505074 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
PDLIM7-213ENST00000505074 M0R378 163 aa9.3□□□□□ -0.92
PDLIM7-213ENST00000505074 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
PDLIM7-213ENST00000505074 CBLN2Q8IUK8 224 aa9.3□□□□□ -0.92
PDLIM7-213ENST00000505074 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
PDLIM7-213ENST00000505074 APOC3P02656 99 aa9.29□□□□□ -0.92
PDLIM7-213ENST00000505074 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
PDLIM7-213ENST00000505074 Q8NDZ9 215 aa9.29□□□□□ -0.92
PDLIM7-213ENST00000505074 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
PDLIM7-213ENST00000505074 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
PDLIM7-213ENST00000505074 PLEKHB2Q96CS7 222 aa9.26□□□□□ -0.93
PDLIM7-213ENST00000505074 SNAPINO95295 136 aa9.25□□□□□ -0.93
PDLIM7-213ENST00000505074 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
PDLIM7-213ENST00000505074 SMIM13P0DJ93 91 aa9.24□□□□□ -0.93
PDLIM7-213ENST00000505074 SVBPQ8N300 66 aa9.24□□□□□ -0.93
PDLIM7-213ENST00000505074 IFI27L1Q96BM0 104 aa9.24□□□□□ -0.93
PDLIM7-213ENST00000505074 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
PDLIM7-213ENST00000505074 NCR3O14931 201 aa9.23□□□□□ -0.93
PDLIM7-213ENST00000505074 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
PDLIM7-213ENST00000505074 BOD1L2Q8IYS8 172 aa9.22□□□□□ -0.93
PDLIM7-213ENST00000505074 CHCHD1Q96BP2 118 aaKnown RBP9.22□□□□□ -0.93
PDLIM7-213ENST00000505074 ZNF706Q9Y5V0 76 aaPredicted RBP9.22□□□□□ -0.93
PDLIM7-213ENST00000505074 H0Y8G0 127 aa9.21□□□□□ -0.94
PDLIM7-213ENST00000505074 PRYO14603 147 aa9.2□□□□□ -0.94
PDLIM7-213ENST00000505074 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
PDLIM7-213ENST00000505074 SPRR4Q96PI1 79 aa9.2□□□□□ -0.94
PDLIM7-213ENST00000505074 ETDCA0A1B0GVM5 59 aa9.19□□□□□ -0.94
PDLIM7-213ENST00000505074 HSBP1O75506 76 aa9.19□□□□□ -0.94
PDLIM7-213ENST00000505074 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
PDLIM7-213ENST00000505074 HERV-K104P63124 156 aa9.18□□□□□ -0.94
PDLIM7-213ENST00000505074 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
PDLIM7-213ENST00000505074 CTAG1AP78358 180 aa9.17□□□□□ -0.94
PDLIM7-213ENST00000505074 S100A12P80511 92 aa9.17□□□□□ -0.94
PDLIM7-213ENST00000505074 SPAG11AQ6PDA7 123 aa9.17□□□□□ -0.94
PDLIM7-213ENST00000505074 FAM19A2Q8N3H0 131 aa9.17□□□□□ -0.94
PDLIM7-213ENST00000505074 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
PDLIM7-213ENST00000505074 PPDPFQ9H3Y8 114 aa9.17□□□□□ -0.94
PDLIM7-213ENST00000505074 MYMXA0A1B0GTQ4 84 aa9.16□□□□□ -0.94
PDLIM7-213ENST00000505074 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
PDLIM7-213ENST00000505074 LINC00337Q8N6G1 96 aa9.15□□□□□ -0.94
PDLIM7-213ENST00000505074 DAND5Q8N907 189 aa9.15□□□□□ -0.94
PDLIM7-213ENST00000505074 SMCR5Q8TEV8 140 aa9.15□□□□□ -0.94
PDLIM7-213ENST00000505074 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
PDLIM7-213ENST00000505074 Q8NBF4 154 aa9.14□□□□□ -0.95
PDLIM7-213ENST00000505074 YPEL4Q96NS1 127 aa9.13□□□□□ -0.95
PDLIM7-213ENST00000505074 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
PDLIM7-213ENST00000505074 LEPROTL1O95214 131 aa9.11□□□□□ -0.95
PDLIM7-213ENST00000505074 SPRR1AP35321 89 aa9.11□□□□□ -0.95
PDLIM7-213ENST00000505074 GAGE2AQ6NT46 116 aa9.11□□□□□ -0.95
PDLIM7-213ENST00000505074 LEPROTO15243 131 aa9.1□□□□□ -0.95
PDLIM7-213ENST00000505074 TSPEAR-AS2P59090 65 aa9.1□□□□□ -0.95
PDLIM7-213ENST00000505074 MIEN1Q9BRT3 115 aa9.1□□□□□ -0.95
PDLIM7-213ENST00000505074 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
PDLIM7-213ENST00000505074 DDTP30046 118 aa9.09□□□□□ -0.95
PDLIM7-213ENST00000505074 HERVK_113P61574 105 aa9.09□□□□□ -0.95
PDLIM7-213ENST00000505074 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
PDLIM7-213ENST00000505074 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
PDLIM7-213ENST00000505074 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
PDLIM7-213ENST00000505074 TRGC2P03986 189 aa9.08□□□□□ -0.96
PDLIM7-213ENST00000505074 PLNP26678 52 aa9.08□□□□□ -0.96
PDLIM7-213ENST00000505074 J3QQQ9 107 aa9.07□□□□□ -0.96
PDLIM7-213ENST00000505074 SERF1AO75920 110 aa9.07□□□□□ -0.96
PDLIM7-213ENST00000505074 FABP4P15090 132 aa9.07□□□□□ -0.96
PDLIM7-213ENST00000505074 MOBPQ13875 183 aa9.07□□□□□ -0.96
PDLIM7-213ENST00000505074 B5MCH6 92 aa9.06□□□□□ -0.96
PDLIM7-213ENST00000505074 DPM2O94777 84 aa9.06□□□□□ -0.96
PDLIM7-213ENST00000505074 SPINK1P00995 79 aa9.06□□□□□ -0.96
PDLIM7-213ENST00000505074 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
PDLIM7-213ENST00000505074 S100A7L2Q5SY68 101 aa9.06□□□□□ -0.96
PDLIM7-213ENST00000505074 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
PDLIM7-213ENST00000505074 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
PDLIM7-213ENST00000505074 LINC00483Q53H64 154 aa9.05□□□□□ -0.96
PDLIM7-213ENST00000505074 KRTAP4-1Q9BYQ7 146 aa9.05□□□□□ -0.96
PDLIM7-213ENST00000505074 SPANXB1Q9NS25 103 aaPredicted RBP9.05□□□□□ -0.96
PDLIM7-213ENST00000505074 TRBV10-2A0A0K0K1G8 114 aa9.04□□□□□ -0.96
PDLIM7-213ENST00000505074 ERC2-IT1O76042 136 aa9.04□□□□□ -0.96
PDLIM7-213ENST00000505074 NPC2P61916 151 aa9.04□□□□□ -0.96
PDLIM7-213ENST00000505074 IGKCP01834 107 aa9.03□□□□□ -0.96
PDLIM7-213ENST00000505074 NMUP48645 174 aa9.03□□□□□ -0.96
PDLIM7-213ENST00000505074 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
PDLIM7-213ENST00000505074 LINC00310P59036 64 aa9.02□□□□□ -0.97
PDLIM7-213ENST00000505074 Q6ZRX8 168 aa9.02□□□□□ -0.97
PDLIM7-213ENST00000505074 Q9BRP9 147 aa9.02□□□□□ -0.97
PDLIM7-213ENST00000505074 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms