RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 CYTL1Q9NRR1 136 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 TENM3Q9P273 2699 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 DNAH9Q9NYC9 4486 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 CTXND1A0A1B0GTU2 59 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 hDV103S1A0JD37 113 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 E7EUB6 86 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 K7EIM0 57 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 NDUFA4O00483 81 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 RTL8CO15255 209 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 CTSGP08311 255 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 SPINK8P0C7L1 97 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 IGLC1P0CG04 106 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 APELAP0DMC3 54 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 PDE6HQ13956 83 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 PEA15Q15121 130 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 SPINK9Q5DT21 86 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM74A1Q5RGS3 127 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 C10orf113Q5VZT2 155 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 LYPD1Q8N2G4 141 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 C5orf17Q8NAS9 161 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 C4orf3Q8WVX3 66 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 MANBALQ9NQG1 85 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 TMEM167BQ9NRX6 74 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 SERP1Q9Y6X1 66 aa2.53□□□□□ -2
PDLIM1P4-201ENST00000504327 A0A0J9YX75 114 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 IGKV1-17P01599 117 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 MGST1P10620 155 aaKnown RBP2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 DEFA5Q01523 94 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 DEFB136Q30KP8 78 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 C9orf153Q5TBE3 101 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 ALKAL2Q6UX46 152 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 ATP11AUNQ6ZP68 121 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 WFDC9Q8NEX5 89 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 FAM213BQ8TBF2 198 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 LINC00526Q96FQ7 95 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 MGST2Q99735 147 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 SLC50A1Q9BRV3 221 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TMEM14CQ9P0S9 112 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 RABAC1Q9UI14 185 aa2.52□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TRAV2A0A0B4J234 112 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 IGHV1-24A0A0C4DH33 117 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 ZNF705FA8MVS1 300 aaPredicted RBP2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 NMBP08949 121 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 BAALC-AS2P0C853 105 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 ROMO1P60602 79 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 FOXI2Q6ZQN5 318 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TMEM136Q6ZRR5 245 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 Q8N814 137 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 ATP6V0E2Q8NHE4 81 aa2.51□□□□□ -2.01
PDLIM1P4-201ENST00000504327 IGKV2D-26A0A0A0MRZ7 120 aa2.5□□□□□ -2.01
PDLIM1P4-201ENST00000504327 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
PDLIM1P4-201ENST00000504327 CRPP02741 224 aa2.5□□□□□ -2.01
PDLIM1P4-201ENST00000504327 MIC13Q5XKP0 118 aa2.5□□□□□ -2.01
PDLIM1P4-201ENST00000504327 Q6AWC8 147 aa2.5□□□□□ -2.01
PDLIM1P4-201ENST00000504327 CMTM2Q8TAZ6 248 aa2.5□□□□□ -2.01
PDLIM1P4-201ENST00000504327 A6NN06 94 aa2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 H3BRN7 92 aa2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 PRB2P02812 416 aaPredicted RBP2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 ARL14EPLP0DKL9 152 aa2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 GCHFRP30047 84 aa2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 UBE2L3P68036 154 aaKnown RBP2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 SMIM7Q9BQ49 75 aa2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 GNG13Q9P2W3 67 aa2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 R4GN34 69 aa2.49□□□□□ -2.01
PDLIM1P4-201ENST00000504327 KIAA1109Q2LD37 5005 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 HUWE1Q7Z6Z7 4374 aaKnown RBP2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 IGLV10-54A0A075B6I4 117 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 RBAKDNA6NC62 111 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 K7EIL1 84 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 IGLC2P0DOY2 106 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 CBLN1P23435 193 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 C1orf134Q5TEV5 83 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TMEM254Q8TBM7 123 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 DYNLRB2Q8TF09 96 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 FAM167A-AS1Q96KT0 104 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 RHPN1-AS1Q9BWJ2 59 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TMEM242Q9NWH2 141 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 MRPL36Q9P0J6 103 aaKnown RBP2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 PSORS1C2Q9UIG4 136 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 LENEPQ9Y5L5 61 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TENM2Q9NT68 2774 aa2.48□□□□□ -2.01
PDLIM1P4-201ENST00000504327 LOC107984156A0A0G2JMH3 177 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TRBV6-1A0A0K0K1D8 114 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 C2orf70A6NJV1 201 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 TMEM262E9PQX1 116 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 SFTA3P0C7M3 94 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 HINT1P49773 126 aaPredicted RBP2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 NPC2P61916 151 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 UBE2G1P62253 170 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 ARL17AQ8IVW1 177 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 Q8N9L7 120 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 C20orf166-AS1Q96NR2 134 aa2.47□□□□□ -2.01
PDLIM1P4-201ENST00000504327 IGLV4-60A0A075B6I1 120 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 A0A087WWC5 75 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 H3BQ15 152 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 MIFP14174 115 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 DEFB114Q30KQ6 69 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 CASC2Q6XLA1 102 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 TVP23CQ96ET8 276 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms