RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 H3BUX3 64 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 PRR4Q16378 134 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 ZNF702PQ9H963 129 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 DHRS4-AS1Q9P1J3 65 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 PKDREJQ9NTG1 2253 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 UNC80Q8N2C7 3258 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 DNAH14Q0VDD8 3507 aa3.88□□□□□ -1.79
LINC01340-201ENST00000504012 SZT2Q5T011 3432 aa3.88□□□□□ -1.79
LINC01340-201ENST00000504012 H0Y9P7 68 aa3.88□□□□□ -1.79
LINC01340-201ENST00000504012 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
LINC01340-201ENST00000504012 Q8N377 158 aa3.88□□□□□ -1.79
LINC01340-201ENST00000504012 NOP10Q9NPE3 64 aaKnown RBP3.88□□□□□ -1.79
LINC01340-201ENST00000504012 ZFHX3Q15911 3703 aa3.87□□□□□ -1.79
LINC01340-201ENST00000504012 TPRP12270 2363 aaKnown RBP3.87□□□□□ -1.79
LINC01340-201ENST00000504012 CYSRT1A8MQ03 144 aa3.87□□□□□ -1.79
LINC01340-201ENST00000504012 K7EQZ3 153 aa3.87□□□□□ -1.79
LINC01340-201ENST00000504012 LY6EQ16553 131 aa3.87□□□□□ -1.79
LINC01340-201ENST00000504012 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
LINC01340-201ENST00000504012 Q8NAQ8 132 aa3.87□□□□□ -1.79
LINC01340-201ENST00000504012 RTL8CO15255 209 aa3.86□□□□□ -1.79
LINC01340-201ENST00000504012 PRB1P04280 392 aa3.86□□□□□ -1.79
LINC01340-201ENST00000504012 EGFEM1PQ0D2K5 195 aa3.86□□□□□ -1.79
LINC01340-201ENST00000504012 C1orf137Q5JT78 98 aa3.86□□□□□ -1.79
LINC01340-201ENST00000504012 CSNK1G2-AS1Q8NCQ2 148 aa3.86□□□□□ -1.79
LINC01340-201ENST00000504012 DEFB112Q30KQ8 113 aa3.85□□□□□ -1.79
LINC01340-201ENST00000504012 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
LINC01340-201ENST00000504012 RETNLBQ9BQ08 111 aa3.85□□□□□ -1.79
LINC01340-201ENST00000504012 SORL1Q92673 2214 aa3.85□□□□□ -1.79
LINC01340-201ENST00000504012 C5orf42Q9H799 3197 aa3.84□□□□□ -1.79
LINC01340-201ENST00000504012 XIRP2A4UGR9 3374 aa3.84□□□□□ -1.79
LINC01340-201ENST00000504012 FSHBP01225 129 aa3.84□□□□□ -1.79
LINC01340-201ENST00000504012 SPINK7P58062 85 aa3.84□□□□□ -1.79
LINC01340-201ENST00000504012 REG3AQ06141 175 aa3.84□□□□□ -1.79
LINC01340-201ENST00000504012 PCNX1Q96RV3 2341 aa3.84□□□□□ -1.79
LINC01340-201ENST00000504012 MAP1BP46821 2468 aaKnown RBP3.84□□□□□ -1.8
LINC01340-201ENST00000504012 TNRC18O15417 2968 aaPredicted RBP3.83□□□□□ -1.8
LINC01340-201ENST00000504012 DEFB131BA0A096LNP1 70 aa3.83□□□□□ -1.8
LINC01340-201ENST00000504012 BRD3OSQ6XYD6 125 aa3.83□□□□□ -1.8
LINC01340-201ENST00000504012 C4orf3Q8WVX3 66 aa3.83□□□□□ -1.8
LINC01340-201ENST00000504012 TP53AIP1Q9HCN2 124 aa3.83□□□□□ -1.8
LINC01340-201ENST00000504012 C6orf48Q9UBA6 75 aa3.83□□□□□ -1.8
LINC01340-201ENST00000504012 PRO0255Q9UI72 69 aa3.83□□□□□ -1.8
LINC01340-201ENST00000504012 CNOT1A5YKK6 2376 aaKnown RBP3.83□□□□□ -1.8
LINC01340-201ENST00000504012 RP1L1Q8IWN7 2480 aaPredicted RBP3.83□□□□□ -1.8
LINC01340-201ENST00000504012 ZZEF1O43149 2961 aa3.83□□□□□ -1.8
LINC01340-201ENST00000504012 COL6A3P12111 3177 aa3.82□□□□□ -1.8
LINC01340-201ENST00000504012 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
LINC01340-201ENST00000504012 IGLV5-37A0A075B6J1 123 aa3.82□□□□□ -1.8
LINC01340-201ENST00000504012 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
LINC01340-201ENST00000504012 PRR34Q9NV39 138 aa3.82□□□□□ -1.8
LINC01340-201ENST00000504012 RPL37AP8A6NKH3 93 aa3.81□□□□□ -1.8
LINC01340-201ENST00000504012 GIG44P09565 113 aaPredicted RBP3.81□□□□□ -1.8
LINC01340-201ENST00000504012 SLURP1P55000 103 aa3.81□□□□□ -1.8
LINC01340-201ENST00000504012 SPAG11AQ6PDA7 123 aa3.81□□□□□ -1.8
LINC01340-201ENST00000504012 LINC00476Q8WZB0 136 aa3.81□□□□□ -1.8
LINC01340-201ENST00000504012 GPR179Q6PRD1 2367 aa3.81□□□□□ -1.8
LINC01340-201ENST00000504012 ANGP03950 147 aaKnown RBP3.8□□□□□ -1.8
LINC01340-201ENST00000504012 SPRR1AP35321 89 aa3.8□□□□□ -1.8
LINC01340-201ENST00000504012 C7orf33Q8WU49 177 aa3.8□□□□□ -1.8
LINC01340-201ENST00000504012 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
LINC01340-201ENST00000504012 FRYQ5TBA9 3013 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 WNK1Q9H4A3 2382 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 IGLV1-50A0A075B6I6 118 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
LINC01340-201ENST00000504012 C10orf99Q6UWK7 81 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 Q6ZR54 194 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 Q6ZRX8 168 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 WFDC13Q8IUB5 93 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
LINC01340-201ENST00000504012 ZNF706Q9Y5V0 76 aaPredicted RBP3.79□□□□□ -1.8
LINC01340-201ENST00000504012 IGLV1-51P01701 117 aa3.78□□□□□ -1.8
LINC01340-201ENST00000504012 PRB2P02812 416 aaPredicted RBP3.78□□□□□ -1.8
LINC01340-201ENST00000504012 MSMBP08118 114 aa3.78□□□□□ -1.8
LINC01340-201ENST00000504012 HRES1P13985 223 aa3.78□□□□□ -1.8
LINC01340-201ENST00000504012 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
LINC01340-201ENST00000504012 APC2O95996 2303 aa3.78□□□□□ -1.8
LINC01340-201ENST00000504012 BRCA2P51587 3418 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 COL6A6A6NMZ7 2263 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 CR1P17927 2039 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 A8MWP4 228 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 LELP1Q5T871 98 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 CLPSL2Q6UWE3 100 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 DEFB105AQ8NG35 78 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 CACNA1HO95180 2353 aa3.77□□□□□ -1.81
LINC01340-201ENST00000504012 ANKHD1Q8IWZ3 2542 aaKnown RBP3.76□□□□□ -1.81
LINC01340-201ENST00000504012 IGLV10-54A0A075B6I4 117 aa3.76□□□□□ -1.81
LINC01340-201ENST00000504012 B4DSR2 109 aa3.76□□□□□ -1.81
LINC01340-201ENST00000504012 WFDC10BQ8IUB3 73 aa3.76□□□□□ -1.81
LINC01340-201ENST00000504012 CAMK2N2Q96S95 79 aa3.76□□□□□ -1.81
LINC01340-201ENST00000504012 EP300Q09472 2414 aaPredicted RBP3.76□□□□□ -1.81
LINC01340-201ENST00000504012 TLX1NBP0CAT3 122 aa3.75□□□□□ -1.81
LINC01340-201ENST00000504012 Q6YL49 198 aa3.75□□□□□ -1.81
LINC01340-201ENST00000504012 KRTAP4-5Q9BYR2 181 aa3.75□□□□□ -1.81
LINC01340-201ENST00000504012 PIEZO2Q9H5I5 2752 aa3.75□□□□□ -1.81
LINC01340-201ENST00000504012 DNAJC9-AS1A6NH13 148 aa3.74□□□□□ -1.81
LINC01340-201ENST00000504012 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
LINC01340-201ENST00000504012 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
LINC01340-201ENST00000504012 LINC00472Q9H8W2 130 aa3.74□□□□□ -1.81
LINC01340-201ENST00000504012 DSPP15924 2871 aaKnown RBP3.74□□□□□ -1.81
LINC01340-201ENST00000504012 USP34Q70CQ2 3546 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms