RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 SPANXB1Q9NS25 103 aaPredicted RBP8.57□□□□□ -1.04
PRDM2-213ENST00000503842 PKD1P98161 4303 aa8.56□□□□□ -1.04
PRDM2-213ENST00000503842 LOC107984640A0A0U1RRK4 108 aa8.56□□□□□ -1.04
PRDM2-213ENST00000503842 Q6ZRP5 223 aa8.56□□□□□ -1.04
PRDM2-213ENST00000503842 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
PRDM2-213ENST00000503842 DAND5Q8N907 189 aa8.56□□□□□ -1.04
PRDM2-213ENST00000503842 SPANXDQ9BXN6 97 aa8.56□□□□□ -1.04
PRDM2-213ENST00000503842 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
PRDM2-213ENST00000503842 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
PRDM2-213ENST00000503842 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
PRDM2-213ENST00000503842 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
PRDM2-213ENST00000503842 PKIGQ9Y2B9 76 aa8.55□□□□□ -1.04
PRDM2-213ENST00000503842 DNAH8Q96JB1 4490 aa8.54□□□□□ -1.04
PRDM2-213ENST00000503842 RPL18AQ02543 176 aaKnown RBP8.54□□□□□ -1.04
PRDM2-213ENST00000503842 Q6ZVH6 145 aa8.54□□□□□ -1.04
PRDM2-213ENST00000503842 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
PRDM2-213ENST00000503842 PTTG1IPP53801 180 aa8.53□□□□□ -1.04
PRDM2-213ENST00000503842 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
PRDM2-213ENST00000503842 KRTAP9-9Q9BYP9 154 aa8.53□□□□□ -1.04
PRDM2-213ENST00000503842 KRTAP9-4Q9BYQ2 154 aa8.53□□□□□ -1.04
PRDM2-213ENST00000503842 A0A096LNI7 61 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 LOC107984156A0A0G2JMH3 177 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 C16orf90A8MZG2 172 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 IFITM1P13164 125 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 GAGE2BQ13066 116 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRDM2-213ENST00000503842 TAL2Q16559 108 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 GAGE2EQ4V326 116 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 ARL17AQ8IVW1 177 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 GAGE2DQ9UEU5 116 aa8.52□□□□□ -1.05
PRDM2-213ENST00000503842 DDTP30046 118 aa8.51□□□□□ -1.05
PRDM2-213ENST00000503842 HSD52Q0P140 79 aa8.51□□□□□ -1.05
PRDM2-213ENST00000503842 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
PRDM2-213ENST00000503842 HIST1H4GQ99525 98 aa8.51□□□□□ -1.05
PRDM2-213ENST00000503842 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
PRDM2-213ENST00000503842 DYNC1H1Q14204 4646 aaKnown RBP8.51□□□□□ -1.05
PRDM2-213ENST00000503842 GCSHP23434 173 aa8.5□□□□□ -1.05
PRDM2-213ENST00000503842 NPC2P61916 151 aa8.5□□□□□ -1.05
PRDM2-213ENST00000503842 MUSTN1Q8IVN3 82 aa8.5□□□□□ -1.05
PRDM2-213ENST00000503842 IGKV2-24A0A0C4DH68 120 aa8.49□□□□□ -1.05
PRDM2-213ENST00000503842 CTAG1AP78358 180 aa8.49□□□□□ -1.05
PRDM2-213ENST00000503842 COPS9Q8WXC6 57 aa8.49□□□□□ -1.05
PRDM2-213ENST00000503842 PANO1I0J062 215 aa8.48□□□□□ -1.05
PRDM2-213ENST00000503842 CHTF8P0CG12 524 aa8.48□□□□□ -1.05
PRDM2-213ENST00000503842 CEND1Q8N111 149 aa8.48□□□□□ -1.05
PRDM2-213ENST00000503842 LRP1BQ9NZR2 4599 aa8.48□□□□□ -1.05
PRDM2-213ENST00000503842 KRTAP10-1P60331 282 aa8.47□□□□□ -1.05
PRDM2-213ENST00000503842 Q8NDZ9 215 aa8.47□□□□□ -1.05
PRDM2-213ENST00000503842 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
PRDM2-213ENST00000503842 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
PRDM2-213ENST00000503842 NDUFC2O95298 119 aa8.45□□□□□ -1.06
PRDM2-213ENST00000503842 VPREB1P12018 145 aa8.45□□□□□ -1.06
PRDM2-213ENST00000503842 FXYD2P54710 66 aa8.45□□□□□ -1.06
PRDM2-213ENST00000503842 RPL24P83731 157 aaKnown RBP8.45□□□□□ -1.06
PRDM2-213ENST00000503842 Q6ZSA8 131 aa8.45□□□□□ -1.06
PRDM2-213ENST00000503842 KRTAP7-1Q8IUC3 87 aa8.45□□□□□ -1.06
PRDM2-213ENST00000503842 PKHD1P08F94 4074 aa8.45□□□□□ -1.06
PRDM2-213ENST00000503842 A0A1W2PNN7 141 aa8.44□□□□□ -1.06
PRDM2-213ENST00000503842 FAM168BA1KXE4 195 aa8.44□□□□□ -1.06
PRDM2-213ENST00000503842 A4D1N5 150 aa8.44□□□□□ -1.06
PRDM2-213ENST00000503842 PCP4L1A6NKN8 68 aa8.44□□□□□ -1.06
PRDM2-213ENST00000503842 SERTAD4-AS1Q5TG53 156 aa8.44□□□□□ -1.06
PRDM2-213ENST00000503842 IGLV5-37A0A075B6J1 123 aa8.43□□□□□ -1.06
PRDM2-213ENST00000503842 EPM2AB3EWF7 344 aa8.43□□□□□ -1.06
PRDM2-213ENST00000503842 M0R143 59 aa8.43□□□□□ -1.06
PRDM2-213ENST00000503842 BVES-AS1Q5T3Y7 98 aa8.43□□□□□ -1.06
PRDM2-213ENST00000503842 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
PRDM2-213ENST00000503842 IGKV2-28A0A075B6P5 120 aa8.42□□□□□ -1.06
PRDM2-213ENST00000503842 IGKV2D-28P01615 120 aa8.42□□□□□ -1.06
PRDM2-213ENST00000503842 HINT1P49773 126 aaPredicted RBP8.42□□□□□ -1.06
PRDM2-213ENST00000503842 LCE4AQ5TA78 99 aa8.42□□□□□ -1.06
PRDM2-213ENST00000503842 PRR3P79522 188 aaKnown RBP8.41□□□□□ -1.06
PRDM2-213ENST00000503842 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
PRDM2-213ENST00000503842 A0A087WYN8 130 aa8.4□□□□□ -1.06
PRDM2-213ENST00000503842 TRBV10-2A0A0K0K1G8 114 aa8.4□□□□□ -1.06
PRDM2-213ENST00000503842 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
PRDM2-213ENST00000503842 NCR3O14931 201 aa8.39□□□□□ -1.07
PRDM2-213ENST00000503842 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
PRDM2-213ENST00000503842 CFC1P0CG37 223 aa8.39□□□□□ -1.07
PRDM2-213ENST00000503842 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
PRDM2-213ENST00000503842 C22orf24Q9Y442 160 aa8.39□□□□□ -1.07
PRDM2-213ENST00000503842 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
PRDM2-213ENST00000503842 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
PRDM2-213ENST00000503842 M0R378 163 aa8.38□□□□□ -1.07
PRDM2-213ENST00000503842 LINC00337Q8N6G1 96 aa8.38□□□□□ -1.07
PRDM2-213ENST00000503842 DPH3Q96FX2 82 aa8.38□□□□□ -1.07
PRDM2-213ENST00000503842 M0QXV9 152 aa8.37□□□□□ -1.07
PRDM2-213ENST00000503842 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
PRDM2-213ENST00000503842 NHP2Q9NX24 153 aaKnown RBP8.37□□□□□ -1.07
PRDM2-213ENST00000503842 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
PRDM2-213ENST00000503842 SCXQ7RTU7 201 aa8.36□□□□□ -1.07
PRDM2-213ENST00000503842 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
PRDM2-213ENST00000503842 CIRBP-AS1Q8TBR5 109 aa8.36□□□□□ -1.07
PRDM2-213ENST00000503842 SNHG12Q9BXW3 62 aa8.36□□□□□ -1.07
PRDM2-213ENST00000503842 TRAV13-2A0A0B4J235 113 aa8.35□□□□□ -1.07
PRDM2-213ENST00000503842 K7ERJ3 54 aa8.35□□□□□ -1.07
PRDM2-213ENST00000503842 IGLV6-57P01721 117 aa8.35□□□□□ -1.07
PRDM2-213ENST00000503842 BATFQ16520 125 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms