RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SMIM11BQ8TCY0 68 aa14.2□□□□□ -0.14
UBE2D3-216ENST00000503742 UPK3BQ9BT76 320 aa14.19□□□□□ -0.14
UBE2D3-216ENST00000503742 ZNF561-AS1K7EIQ3 104 aa14.18□□□□□ -0.14
UBE2D3-216ENST00000503742 HIGD2BQ4VC39 106 aa14.18□□□□□ -0.14
UBE2D3-216ENST00000503742 DYNC2H1Q8NCM8 4307 aaKnown RBP14.17□□□□□ -0.14
UBE2D3-216ENST00000503742 C2orf48Q96LS8 159 aa14.16□□□□□ -0.14
UBE2D3-216ENST00000503742 Q8NDZ9 215 aa14.16□□□□□ -0.14
UBE2D3-216ENST00000503742 PRR3P79522 188 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-216ENST00000503742 OR13C6PQ8NH95 151 aa14.15□□□□□ -0.14
UBE2D3-216ENST00000503742 Q9HAA7 133 aa14.15□□□□□ -0.14
UBE2D3-216ENST00000503742 CAMK2N2Q96S95 79 aa14.14□□□□□ -0.15
UBE2D3-216ENST00000503742 FAM218AQ96MZ4 157 aa14.14□□□□□ -0.15
UBE2D3-216ENST00000503742 STAB2Q8WWQ8 2551 aa14.14□□□□□ -0.15
UBE2D3-216ENST00000503742 TRACP01848 142 aa14.13□□□□□ -0.15
UBE2D3-216ENST00000503742 F8WDY8 70 aa14.12□□□□□ -0.15
UBE2D3-216ENST00000503742 SNCGO76070 127 aa14.12□□□□□ -0.15
UBE2D3-216ENST00000503742 Q6ZRU5 148 aa14.12□□□□□ -0.15
UBE2D3-216ENST00000503742 TEX49A0A1B0GTD5 131 aa14.11□□□□□ -0.15
UBE2D3-216ENST00000503742 FAM240AA0A1B0GVK7 77 aa14.11□□□□□ -0.15
UBE2D3-216ENST00000503742 Q6Q795 121 aa14.11□□□□□ -0.15
UBE2D3-216ENST00000503742 H0YGX0 51 aa14.09□□□□□ -0.15
UBE2D3-216ENST00000503742 TMEM126AQ9H061 195 aa14.09□□□□□ -0.15
UBE2D3-216ENST00000503742 NCR3O14931 201 aa14.07□□□□□ -0.16
UBE2D3-216ENST00000503742 NHLRC4P0CG21 123 aaPredicted RBP14.07□□□□□ -0.16
UBE2D3-216ENST00000503742 APLNQ9ULZ1 77 aa14.07□□□□□ -0.16
UBE2D3-216ENST00000503742 GAGE2BQ13066 116 aa14.07□□□□□ -0.16
UBE2D3-216ENST00000503742 GAGE2EQ4V326 116 aa14.07□□□□□ -0.16
UBE2D3-216ENST00000503742 GAGE2DQ9UEU5 116 aa14.07□□□□□ -0.16
UBE2D3-216ENST00000503742 RMI2Q96E14 147 aa14.05□□□□□ -0.16
UBE2D3-216ENST00000503742 ANAPC13Q9BS18 74 aa14.05□□□□□ -0.16
UBE2D3-216ENST00000503742 XAGE1AQ9HD64 81 aa14.05□□□□□ -0.16
UBE2D3-216ENST00000503742 A0A087WYN8 130 aa14.03□□□□□ -0.16
UBE2D3-216ENST00000503742 NDUFC2-KCTD14E9PQ53 114 aa14.03□□□□□ -0.16
UBE2D3-216ENST00000503742 SYCNQ0VAF6 134 aa14.03□□□□□ -0.16
UBE2D3-216ENST00000503742 CASC10Q5T4H9 136 aa14.03□□□□□ -0.16
UBE2D3-216ENST00000503742 DNHD1Q96M86 4753 aa14.03□□□□□ -0.16
UBE2D3-216ENST00000503742 LYSTQ99698 3801 aa14.02□□□□□ -0.17
UBE2D3-216ENST00000503742 PRKDCP78527 4128 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-216ENST00000503742 IGLV6-57P01721 117 aa14.01□□□□□ -0.17
UBE2D3-216ENST00000503742 S100A7L2Q5SY68 101 aa14.01□□□□□ -0.17
UBE2D3-216ENST00000503742 USP17L23D6RBM5 183 aa14□□□□□ -0.17
UBE2D3-216ENST00000503742 ACYP1P07311 99 aa14□□□□□ -0.17
UBE2D3-216ENST00000503742 RPL18AQ02543 176 aaKnown RBP14□□□□□ -0.17
UBE2D3-216ENST00000503742 BAALC-AS2P0C853 105 aa13.99□□□□□ -0.17
UBE2D3-216ENST00000503742 CSMD3Q7Z407 3707 aa13.99□□□□□ -0.17
UBE2D3-216ENST00000503742 Q6ZRP5 223 aa13.98□□□□□ -0.17
UBE2D3-216ENST00000503742 SLPIP03973 132 aa13.98□□□□□ -0.17
UBE2D3-216ENST00000503742 KRTAP1-5Q9BYS1 174 aa13.98□□□□□ -0.17
UBE2D3-216ENST00000503742 C22orf24Q9Y442 160 aa13.98□□□□□ -0.17
UBE2D3-216ENST00000503742 VPREB1P12018 145 aa13.97□□□□□ -0.17
UBE2D3-216ENST00000503742 PLECQ15149 4684 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-216ENST00000503742 LECT2O14960 151 aa13.96□□□□□ -0.17
UBE2D3-216ENST00000503742 TTC32Q5I0X7 151 aa13.96□□□□□ -0.17
UBE2D3-216ENST00000503742 DNAH7Q8WXX0 4024 aa13.96□□□□□ -0.17
UBE2D3-216ENST00000503742 DNAL4O96015 105 aa13.96□□□□□ -0.18
UBE2D3-216ENST00000503742 NDUFV3P56181 108 aaKnown RBP13.96□□□□□ -0.18
UBE2D3-216ENST00000503742 C6orf99Q4VX62 202 aa13.95□□□□□ -0.18
UBE2D3-216ENST00000503742 UBE2DNLQ8IWF7 75 aa13.95□□□□□ -0.18
UBE2D3-216ENST00000503742 A0A1B0GX51 115 aa13.94□□□□□ -0.18
UBE2D3-216ENST00000503742 TLX1NBP0CAT3 122 aa13.94□□□□□ -0.18
UBE2D3-216ENST00000503742 NUPR2A6NF83 97 aa13.94□□□□□ -0.18
UBE2D3-216ENST00000503742 TRBV10-3A0A0K0K1G6 114 aa13.92□□□□□ -0.18
UBE2D3-216ENST00000503742 LINC00167Q96N53 147 aa13.92□□□□□ -0.18
UBE2D3-216ENST00000503742 C9orf129Q5T035 196 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-216ENST00000503742 TRBV7-7A0A0K0K1E9 115 aa13.91□□□□□ -0.18
UBE2D3-216ENST00000503742 M0R378 163 aa13.9□□□□□ -0.18
UBE2D3-216ENST00000503742 Q8N814 137 aa13.9□□□□□ -0.18
UBE2D3-216ENST00000503742 DNAH10Q8IVF4 4471 aa13.9□□□□□ -0.18
UBE2D3-216ENST00000503742 TRAV23DV6A0A075B6W5 121 aa13.88□□□□□ -0.19
UBE2D3-216ENST00000503742 IMUPQ9GZP8 106 aa13.88□□□□□ -0.19
UBE2D3-216ENST00000503742 INAFM2P0DMQ5 153 aa13.87□□□□□ -0.19
UBE2D3-216ENST00000503742 LINC00575Q6W349 94 aa13.87□□□□□ -0.19
UBE2D3-216ENST00000503742 STARD9Q9P2P6 4700 aa13.85□□□□□ -0.19
UBE2D3-216ENST00000503742 ORMDL1Q9P0S3 153 aa13.85□□□□□ -0.19
UBE2D3-216ENST00000503742 MEGF8Q7Z7M0 2845 aa13.85□□□□□ -0.19
UBE2D3-216ENST00000503742 PLA2G2DQ9UNK4 145 aa13.84□□□□□ -0.19
UBE2D3-216ENST00000503742 DIRC1Q969H9 104 aa13.83□□□□□ -0.19
UBE2D3-216ENST00000503742 ZNF73O43830 326 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-216ENST00000503742 SERTAD4-AS1Q5TG53 156 aa13.82□□□□□ -0.2
UBE2D3-216ENST00000503742 SDIM1Q6ZPB5 146 aa13.82□□□□□ -0.2
UBE2D3-216ENST00000503742 LINC00643Q86TS7 51 aa13.82□□□□□ -0.2
UBE2D3-216ENST00000503742 VPS13DQ5THJ4 4388 aa13.81□□□□□ -0.2
UBE2D3-216ENST00000503742 OBSCN-AS1Q96MR7 158 aa13.81□□□□□ -0.2
UBE2D3-216ENST00000503742 TRBV7-6A0A0J9YX20 115 aa13.8□□□□□ -0.2
UBE2D3-216ENST00000503742 hADV29S1A0JD25 119 aa13.8□□□□□ -0.2
UBE2D3-216ENST00000503742 NBDYA0A0U1RRE5 68 aa13.79□□□□□ -0.2
UBE2D3-216ENST00000503742 PSCAO43653 123 aa13.79□□□□□ -0.2
UBE2D3-216ENST00000503742 KRTAP21-3Q3LHN1 58 aa13.79□□□□□ -0.2
UBE2D3-216ENST00000503742 TENM2Q9NT68 2774 aa13.79□□□□□ -0.2
UBE2D3-216ENST00000503742 IGLV5-37A0A075B6J1 123 aa13.78□□□□□ -0.2
UBE2D3-216ENST00000503742 LOC107984640A0A0U1RRK4 108 aa13.78□□□□□ -0.2
UBE2D3-216ENST00000503742 ELOF1P60002 83 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-216ENST00000503742 NKAPP1Q8N9T2 125 aa13.78□□□□□ -0.2
UBE2D3-216ENST00000503742 CNBPP62633 177 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-216ENST00000503742 COX7BP24311 80 aa13.76□□□□□ -0.21
UBE2D3-216ENST00000503742 C7orf33Q8WU49 177 aa13.76□□□□□ -0.21
UBE2D3-216ENST00000503742 TMEM256-PLSCR3K7ERE1 68 aa13.76□□□□□ -0.21
UBE2D3-216ENST00000503742 B5MCH6 92 aa13.74□□□□□ -0.21
UBE2D3-216ENST00000503742 KRTAP7-1Q8IUC3 87 aa13.74□□□□□ -0.21
UBE2D3-216ENST00000503742 KCNQ1DNQ9H478 68 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms