RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PITX3O75364 302 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 MT-ND6P03923 174 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 HLA-DRB4P13762 266 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 C9orf153Q5TBE3 101 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 UNQ5815/PRO19632Q6UWF5 114 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 TEN1Q86WV5 123 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 AGPAT4-IT1Q9H0P7 198 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 CST11Q9H112 138 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 LSM2Q9Y333 95 aaKnown RBP2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 HLA-DRB4X5D2U9 266 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 DNAH6Q9C0G6 4158 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV20-1A0A075B6N2 111 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRAV1-1A0A0B4J248 108 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 LCE6AA0A183 80 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 FAM236AA0A1B0GUQ0 79 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 FAM236BA0A1B0GV22 79 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 IGLC7A0M8Q6 106 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 FAM24AA6NFZ4 105 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 IGLV1-51P01701 117 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRACP01848 142 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 BAALC-AS2P0C853 105 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 FABP2P12104 132 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 SLC25A4P12235 298 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 MIFP14174 115 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 SEC11AP67812 179 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 FXYD3Q14802 87 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 PLGLAQ15195 96 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 ALKAL2Q6UX46 152 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 TMEM91Q6ZNR0 172 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 BRK1Q8WUW1 75 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 ARHGAP5-AS1Q96IT6 56 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 ABRACLQ9P1F3 81 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 TPRKBQ9Y3C4 175 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 SERP1Q9Y6X1 66 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 HECTD4Q9Y4D8 3996 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 DNAH17Q9UFH2 4485 aa2.14□□□□□ -2.07
HMGB1P3-201ENST00000502802 MUC4Q99102 2169 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV6-7A0A0A0MS04 114 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV6-5A0A0K0K1A5 114 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 H3BUA1 57 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 M0R378 163 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 SNCGO76070 127 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 SFT2D2O95562 160 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 APELAP0DMC3 54 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 MGST1P10620 155 aaKnown RBP2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 UBE2BP63146 152 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 ADIRFQ15847 76 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 LINC00322Q6ZN03 302 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 NPVFQ9HCQ7 196 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 DNAH2Q9P225 4427 aa2.13□□□□□ -2.07
HMGB1P3-201ENST00000502802 PKHD1P08F94 4074 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRAV3A0A0B4J244 114 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 E7EUB6 86 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 H3BRM9 83 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 HIST1H2BKO60814 126 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 NDUFB6O95139 128 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 PRH1P02810 166 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 HIST1H2BJP06899 126 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 ATP5EP56381 51 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 HBBP68871 147 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 C15orf53Q8NAA6 179 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 USMG5Q96IX5 58 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 NAA38Q9BRA0 125 aaKnown RBP2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 WFDC10AQ9H1F0 79 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 SLC35B3Q9H1N7 401 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 ST20Q9HBF5 79 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 CACFD1Q9UGQ2 172 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
HMGB1P3-201ENST00000502802 PKD1P98161 4303 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 A0A087WWC5 75 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRAV1-2A0A0B4J238 106 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 C2orf70A6NJV1 201 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 FAM223BA6NKX1 122 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 TMEM256-PLSCR3K7ERE1 68 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 HYPMO75409 117 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 CFDP00746 253 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 TCRAP04437 139 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 SAA1P0DJI8 122 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 NPC2P61916 151 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 ESRGQ1W209 222 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 KLK9Q2XQG4 91 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 DEFB114Q30KQ6 69 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 ASB16-AS1Q495Z4 193 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 C10orf55Q5SWW7 151 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 FAM223AQ8IWN6 122 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 VSTM2AQ8TAG5 236 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 PRELID3AQ96N28 172 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 PMCHL2Q9BQD1 86 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 KLK9Q9UKQ9 250 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 FAT2Q9NYQ8 4349 aa2.11□□□□□ -2.07
HMGB1P3-201ENST00000502802 HERC2O95714 4834 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 RYR1P21817 5038 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 DYNC1H1Q14204 4646 aaKnown RBP2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRAV14DV4A0A0A6YYC5 116 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 PIGBOS1A0A0B4J2F0 54 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 HBDP02042 147 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 IGLC2P0DOY2 106 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 IGLC3P0DOY3 106 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 COX7CP15954 63 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms