RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 NBEAL2Q6ZNJ1 2754 aa2.62□□□□□ -1.99
HMGB1P21-201ENST00000502313 RYR2Q92736 4967 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 TRBV10-2A0A0K0K1G8 114 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 H7C2G1 150 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 K7EMI3 77 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 FABP4P15090 132 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 CKS2P33552 79 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 FUSP35637 526 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 TMEM258P61165 79 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 SS18Q15532 418 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 SPANXN1Q5VSR9 72 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 TMEM136Q6ZRR5 245 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 CLEC2BQ92478 149 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 ODF3Q96PU9 254 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 AGPAT4-IT1Q9H0P7 198 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 S4R3C0 116 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 LYSTQ99698 3801 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 STARD9Q9P2P6 4700 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 VPS13DQ5THJ4 4388 aa2.61□□□□□ -1.99
HMGB1P21-201ENST00000502313 IGHV3OR16-8A0A075B7F1 116 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 ASIPP42127 132 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 HSD52Q0P140 79 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 PMCHL1Q16048 86 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 IQCJQ1A5X6 159 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 DEFB114Q30KQ6 69 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 FOXI2Q6ZQN5 318 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 Q6ZUT4 128 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 NDUFA11Q86Y39 141 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 MYOZ3Q8TDC0 251 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 PRR34Q9NV39 138 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 DNAH2Q9P225 4427 aa2.6□□□□□ -1.99
HMGB1P21-201ENST00000502313 IGKV2D-26A0A0A0MRZ7 120 aa2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 C2orf70A6NJV1 201 aa2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 ZNF705FA8MVS1 300 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 SPINK4O60575 86 aa2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 MRPL54Q6P161 138 aaKnown RBP2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 Q6ZQT0 140 aa2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 C20orf78Q9BR46 151 aa2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 SNHG12Q9BXW3 62 aa2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 NXT2Q9NPJ8 142 aaKnown RBP2.59□□□□□ -1.99
HMGB1P21-201ENST00000502313 NACAE9PAV3 2078 aa2.59□□□□□ -2
HMGB1P21-201ENST00000502313 IGKV3-7A0A075B6H7 116 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 TRBV20-1A0A075B6N2 111 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 A0A0J9YX75 114 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 M0R3E3 92 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 IGLV1-51P01701 117 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 ARMS2P0C7Q2 107 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 CRIP1P50238 77 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 FXYD2P54710 66 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 MRPS36P82909 103 aaKnown RBP2.58□□□□□ -2
HMGB1P21-201ENST00000502313 CIRBPQ14011 172 aaKnown RBP2.58□□□□□ -2
HMGB1P21-201ENST00000502313 ESRGQ1W209 222 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 TDRG1Q3Y452 100 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 Q86TA4 180 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 WFDC9Q8NEX5 89 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 OR10AG1Q8NH19 301 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 HHLA3Q9XRX5 114 aa2.58□□□□□ -2
HMGB1P21-201ENST00000502313 FAT2Q9NYQ8 4349 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 TENM2Q9NT68 2774 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 DNAH10Q8IVF4 4471 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 IGKV2-40A0A087WW87 121 aaPredicted RBP2.57□□□□□ -2
HMGB1P21-201ENST00000502313 LEPROTL1O95214 131 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 IGKV2D-40P01614 121 aaPredicted RBP2.57□□□□□ -2
HMGB1P21-201ENST00000502313 ATOH7Q8N100 152 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 Q8N814 137 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 CNFNQ9BYD5 112 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 DPH3P1Q9H4G8 78 aa2.57□□□□□ -2
HMGB1P21-201ENST00000502313 HYDINQ4G0P3 5121 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 TMSB15BA0A087X1C1 80 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 TRAV12-3A0A0B4J271 114 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 M0R2P5 195 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 TRACP01848 142 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 HTN1P15515 57 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 FCER1GP30273 86 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 DEFB131AP59861 70 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 PMCHL2Q9BQD1 86 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 LINC00467Q9BRT7 94 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 ST20Q9HBF5 79 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 EPPK1P58107 5090 aaKnown RBP2.56□□□□□ -2
HMGB1P21-201ENST00000502313 DNAH6Q9C0G6 4158 aa2.56□□□□□ -2
HMGB1P21-201ENST00000502313 KMT2AQ03164 3969 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 hDV103S1A0JD37 113 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 A6NN06 94 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 ROMO1P60602 79 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 KRTDAPP60985 99 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 COL5A1-AS1Q5SY13 56 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 C9orf153Q5TBE3 101 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 C1orf134Q5TEV5 83 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
HMGB1P21-201ENST00000502313 LINC00322Q6ZN03 302 aaPredicted RBP2.55□□□□□ -2
HMGB1P21-201ENST00000502313 FRAS1Q86XX4 4008 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 Q8N8P6 123 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 C18orf32Q8TCD1 76 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 TMEM141Q96I45 108 aa2.55□□□□□ -2
HMGB1P21-201ENST00000502313 NHP2Q9NX24 153 aaKnown RBP2.55□□□□□ -2
HMGB1P21-201ENST00000502313 TIMM8BQ9Y5J9 83 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms