RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 SLURP1P55000 103 aa3.32□□□□□ -1.88
NEAT1-202ENST00000501122 NLRC5Q86WI3 1866 aa3.32□□□□□ -1.88
NEAT1-202ENST00000501122 TNRC6CQ9HCJ0 1690 aaKnown RBP3.32□□□□□ -1.88
NEAT1-202ENST00000501122 SBF1O95248 1867 aa3.32□□□□□ -1.88
NEAT1-202ENST00000501122 C4orf3Q8WVX3 66 aa3.32□□□□□ -1.88
NEAT1-202ENST00000501122 Q8NBF4 154 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 C16orf95Q9H693 158 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 ZNF236Q9UL36 1845 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 PLXNB2O15031 1838 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 LITAFQ99732 161 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 COL24A1Q17RW2 1714 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 BCORQ6W2J9 1755 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 RALGAPA2Q2PPJ7 1873 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 OCR1Q9BZK8 76 aa3.31□□□□□ -1.88
NEAT1-202ENST00000501122 ASH1LQ9NR48 2969 aaKnown RBP3.3□□□□□ -1.88
NEAT1-202ENST00000501122 TRANK1O15050 2925 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 ZNF831Q5JPB2 1677 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 VPS13AQ96RL7 3174 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 INAFM1C9JVW0 142 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 IGLV1-47P01700 117 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 IGLV5-45A0A087WSX0 123 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 COL4A3Q01955 1670 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 ZFP36P26651 326 aaKnown RBP3.3□□□□□ -1.88
NEAT1-202ENST00000501122 K7EQG2 157 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 GLI3P10071 1580 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 PLCH1Q4KWH8 1693 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 LINC01558Q9Y6Z2 57 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 TMEM105Q8N8V8 129 aa3.3□□□□□ -1.88
NEAT1-202ENST00000501122 SCN7AQ01118 1682 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 FASNP49327 2511 aaKnown RBP3.29□□□□□ -1.88
NEAT1-202ENST00000501122 BTAF1O14981 1849 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 PTPRSQ13332 1948 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 IGKV2-24A0A0C4DH68 120 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 EPM2AB3EWF7 344 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 OBSCN-AS1Q96MR7 158 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 AHDC1Q5TGY3 1603 aaPredicted RBP3.29□□□□□ -1.88
NEAT1-202ENST00000501122 PLXNA2O75051 1894 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 A8MWP4 228 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 Q6ZSN1 163 aa3.29□□□□□ -1.88
NEAT1-202ENST00000501122 PLXNA1Q9UIW2 1896 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 LINC01356Q8N9X3 169 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 IGKV2D-30A0A075B6S6 120 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 ITGB4P16144 1822 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 C14orf177Q52M58 125 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 KALRNO60229 2985 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 ATMQ13315 3056 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 SIGLEC1Q9BZZ2 1709 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 FBXL19-AS1Q494R0 122 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 BOD1L1Q8NFC6 3051 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 ATRQ13535 2644 aa3.28□□□□□ -1.88
NEAT1-202ENST00000501122 COL11A2P13942 1736 aaPredicted RBP3.28□□□□□ -1.88
NEAT1-202ENST00000501122 Q8NAQ8 132 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 XIRP1Q702N8 1843 aaKnown RBP3.27□□□□□ -1.89
NEAT1-202ENST00000501122 WDFY4Q6ZS81 3184 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 ITPR1Q14643 2758 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 DEFB113Q30KQ7 82 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 KIAA1551Q9HCM1 1747 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 MSMPQ1L6U9 139 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 SHANK3Q9BYB0 1731 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 IGLV9-49A0A0B4J1Y8 123 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 MGAM2Q2M2H8 2515 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 TLX1NBP0CAT3 122 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 C9orf129Q5T035 196 aaKnown RBP3.27□□□□□ -1.89
NEAT1-202ENST00000501122 NBEAL2Q6ZNJ1 2754 aa3.27□□□□□ -1.89
NEAT1-202ENST00000501122 TJP1Q07157 1748 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 IGLV4-60A0A075B6I1 120 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 CHTF8P0CG12 524 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 KDM3BQ7LBC6 1761 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 LINC00315P59091 139 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 A0A1B0GUV1 79 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 ST20-AS1Q8NBB2 130 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.26□□□□□ -1.89
NEAT1-202ENST00000501122 PRO3102Q9H379 93 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 NOTCH1P46531 2555 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 ADGRG4Q8IZF6 3080 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 LELP1Q5T871 98 aa3.26□□□□□ -1.89
NEAT1-202ENST00000501122 F8W735 103 aaPredicted RBP3.26□□□□□ -1.89
NEAT1-202ENST00000501122 NUP210Q8TEM1 1887 aaPredicted RBP3.26□□□□□ -1.89
NEAT1-202ENST00000501122 ANKRD11Q6UB99 2663 aaPredicted RBP3.26□□□□□ -1.89
NEAT1-202ENST00000501122 ADAMTSL3P82987 1691 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 IGLV7-46A0A075B6I9 117 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 STRCP1A6NGW2 1772 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 K7EQZ3 153 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 TACC2O95359 2948 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 C10orf99Q6UWK7 81 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 CENPEQ02224 2701 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 APLNQ9ULZ1 77 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 NUPR2A6NF83 97 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 MAST4O15021 2626 aa3.25□□□□□ -1.89
NEAT1-202ENST00000501122 C5orf42Q9H799 3197 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 ADAMTS7Q9UKP4 1686 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 RNF223E7ERA6 249 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 SPINK7P58062 85 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 UNC79Q9P2D8 2635 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 TEX15Q9BXT5 2789 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 A6NN06 94 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 CEP295Q9C0D2 2601 aa3.24□□□□□ -1.89
NEAT1-202ENST00000501122 PAPPA2Q9BXP8 1791 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms