RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
LMNA-217ENST00000498722 PRO1854Q9UHT4 67 aa10.54□□□□□ -0.72
LMNA-217ENST00000498722 DYNC1H1Q14204 4646 aaKnown RBP10.53□□□□□ -0.72
LMNA-217ENST00000498722 PFN2P35080 140 aa10.53□□□□□ -0.72
LMNA-217ENST00000498722 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.73
LMNA-217ENST00000498722 VAMP3Q15836 100 aa10.52□□□□□ -0.73
LMNA-217ENST00000498722 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
LMNA-217ENST00000498722 C2orf48Q96LS8 159 aa10.52□□□□□ -0.73
LMNA-217ENST00000498722 C15orf56Q8N910 161 aa10.51□□□□□ -0.73
LMNA-217ENST00000498722 KIAA1109Q2LD37 5005 aa10.5□□□□□ -0.73
LMNA-217ENST00000498722 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
LMNA-217ENST00000498722 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
LMNA-217ENST00000498722 FABP2P12104 132 aa10.5□□□□□ -0.73
LMNA-217ENST00000498722 UNQ6190/PRO20217Q6UXQ8 127 aa10.5□□□□□ -0.73
LMNA-217ENST00000498722 SOSTDC1Q6X4U4 206 aa10.5□□□□□ -0.73
LMNA-217ENST00000498722 CAMK2N2Q96S95 79 aa10.5□□□□□ -0.73
LMNA-217ENST00000498722 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
LMNA-217ENST00000498722 TSPAN13O95857 204 aa10.48□□□□□ -0.73
LMNA-217ENST00000498722 LYRM7Q5U5X0 104 aa10.48□□□□□ -0.73
LMNA-217ENST00000498722 DNAH5Q8TE73 4624 aa10.47□□□□□ -0.73
LMNA-217ENST00000498722 LOC107984156A0A0G2JMH3 177 aa10.47□□□□□ -0.73
LMNA-217ENST00000498722 GTF2H5Q6ZYL4 71 aa10.47□□□□□ -0.73
LMNA-217ENST00000498722 ARL17AQ8IVW1 177 aa10.47□□□□□ -0.73
LMNA-217ENST00000498722 LINC00526Q96FQ7 95 aa10.47□□□□□ -0.73
LMNA-217ENST00000498722 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
LMNA-217ENST00000498722 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
LMNA-217ENST00000498722 EIF4EBP3O60516 100 aaPredicted RBP10.46□□□□□ -0.73
LMNA-217ENST00000498722 HAMPP81172 84 aa10.46□□□□□ -0.73
LMNA-217ENST00000498722 C10orf25Q5T742 122 aa10.46□□□□□ -0.73
LMNA-217ENST00000498722 Q1RN00 199 aa10.45□□□□□ -0.74
LMNA-217ENST00000498722 C6orf48Q9UBA6 75 aa10.45□□□□□ -0.74
LMNA-217ENST00000498722 LRP1BQ9NZR2 4599 aa10.45□□□□□ -0.74
LMNA-217ENST00000498722 TRAV13-2A0A0B4J235 113 aa10.44□□□□□ -0.74
LMNA-217ENST00000498722 GAGE10A6NGK3 116 aa10.44□□□□□ -0.74
LMNA-217ENST00000498722 UBE2V1Q13404 147 aa10.44□□□□□ -0.74
LMNA-217ENST00000498722 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
LMNA-217ENST00000498722 K7EP34 96 aa10.43□□□□□ -0.74
LMNA-217ENST00000498722 SYCNQ0VAF6 134 aa10.43□□□□□ -0.74
LMNA-217ENST00000498722 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
LMNA-217ENST00000498722 SPCS1Q9Y6A9 102 aa10.43□□□□□ -0.74
LMNA-217ENST00000498722 NDUFC2O95298 119 aa10.42□□□□□ -0.74
LMNA-217ENST00000498722 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
LMNA-217ENST00000498722 PSMB2P49721 201 aa10.42□□□□□ -0.74
LMNA-217ENST00000498722 XGP55808 180 aa10.42□□□□□ -0.74
LMNA-217ENST00000498722 RNF151Q2KHN1 245 aa10.42□□□□□ -0.74
LMNA-217ENST00000498722 Q6ZRU5 148 aa10.42□□□□□ -0.74
LMNA-217ENST00000498722 CNBPP62633 177 aaKnown RBP10.41□□□□□ -0.74
LMNA-217ENST00000498722 H7C2G1 150 aa10.4□□□□□ -0.74
LMNA-217ENST00000498722 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
LMNA-217ENST00000498722 SLPIP03973 132 aa10.39□□□□□ -0.75
LMNA-217ENST00000498722 SCGB1C2P0DMR2 95 aa10.39□□□□□ -0.75
LMNA-217ENST00000498722 CARD19Q96LW7 228 aa10.39□□□□□ -0.75
LMNA-217ENST00000498722 PCLOQ9Y6V0 5065 aa10.39□□□□□ -0.75
LMNA-217ENST00000498722 SMR3BP02814 79 aaPredicted RBP10.38□□□□□ -0.75
LMNA-217ENST00000498722 COX6CP09669 75 aa10.38□□□□□ -0.75
LMNA-217ENST00000498722 RYR1P21817 5038 aa10.37□□□□□ -0.75
LMNA-217ENST00000498722 TRBV20-1A0A075B6N2 111 aa10.37□□□□□ -0.75
LMNA-217ENST00000498722 IGKV2-28A0A075B6P5 120 aa10.37□□□□□ -0.75
LMNA-217ENST00000498722 NDUFC2-KCTD14E9PQ53 114 aa10.37□□□□□ -0.75
LMNA-217ENST00000498722 IGKV2D-28P01615 120 aa10.37□□□□□ -0.75
LMNA-217ENST00000498722 Q6ZSA8 131 aa10.37□□□□□ -0.75
LMNA-217ENST00000498722 Q8N1X5 172 aa10.37□□□□□ -0.75
LMNA-217ENST00000498722 APOBP04114 4563 aaKnown RBP10.37□□□□□ -0.75
LMNA-217ENST00000498722 HSPG2P98160 4391 aa10.36□□□□□ -0.75
LMNA-217ENST00000498722 TLX1NBP0CAT3 122 aa10.35□□□□□ -0.75
LMNA-217ENST00000498722 SCXQ7RTU7 201 aa10.35□□□□□ -0.75
LMNA-217ENST00000498722 LINC00337Q8N6G1 96 aa10.35□□□□□ -0.75
LMNA-217ENST00000498722 TRIAP1O43715 76 aa10.34□□□□□ -0.75
LMNA-217ENST00000498722 SDIM1Q6ZPB5 146 aa10.34□□□□□ -0.75
LMNA-217ENST00000498722 DPH3Q96FX2 82 aa10.34□□□□□ -0.75
LMNA-217ENST00000498722 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
LMNA-217ENST00000498722 OR13C6PQ8NH95 151 aa10.33□□□□□ -0.76
LMNA-217ENST00000498722 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.33□□□□□ -0.76
LMNA-217ENST00000498722 TRBV10-2A0A0K0K1G8 114 aa10.32□□□□□ -0.76
LMNA-217ENST00000498722 RPL28P46779 137 aaKnown RBP10.32□□□□□ -0.76
LMNA-217ENST00000498722 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
LMNA-217ENST00000498722 TMEM126AQ9H061 195 aa10.32□□□□□ -0.76
LMNA-217ENST00000498722 IGKV2-24A0A0C4DH68 120 aa10.31□□□□□ -0.76
LMNA-217ENST00000498722 TCL1BO95988 128 aa10.31□□□□□ -0.76
LMNA-217ENST00000498722 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
LMNA-217ENST00000498722 ATXN8Q156A1 80 aa10.31□□□□□ -0.76
LMNA-217ENST00000498722 Q5VSD8 79 aa10.31□□□□□ -0.76
LMNA-217ENST00000498722 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
LMNA-217ENST00000498722 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
LMNA-217ENST00000498722 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
LMNA-217ENST00000498722 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
LMNA-217ENST00000498722 Q6ZRP5 223 aa10.3□□□□□ -0.76
LMNA-217ENST00000498722 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
LMNA-217ENST00000498722 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
LMNA-217ENST00000498722 PKIGQ9Y2B9 76 aa10.3□□□□□ -0.76
LMNA-217ENST00000498722 H3BMG7 143 aa10.29□□□□□ -0.76
LMNA-217ENST00000498722 PANO1I0J062 215 aa10.29□□□□□ -0.76
LMNA-217ENST00000498722 NCR3O14931 201 aa10.29□□□□□ -0.76
LMNA-217ENST00000498722 RPL18AQ02543 176 aaKnown RBP10.29□□□□□ -0.76
LMNA-217ENST00000498722 S100A7L2Q5SY68 101 aa10.29□□□□□ -0.76
LMNA-217ENST00000498722 LINC00528Q8N1L1 170 aa10.28□□□□□ -0.76
LMNA-217ENST00000498722 SMIM11BQ8TCY0 68 aa10.28□□□□□ -0.76
LMNA-217ENST00000498722 F8W1H4 67 aa10.27□□□□□ -0.77
LMNA-217ENST00000498722 A0A096LNI7 61 aa10.26□□□□□ -0.77
LMNA-217ENST00000498722 VPREB1P12018 145 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms