RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 Q8N3U1 123 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 ANK2Q01484 3957 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 JMJD7-PLA2G4BH0Y9G9 81 aa11.19□□□□□ -0.62
COL6A1-206ENST00000498614 FAM19A5Q7Z5A7 132 aaPredicted RBP11.19□□□□□ -0.62
COL6A1-206ENST00000498614 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
COL6A1-206ENST00000498614 KIAA0087Q14695 138 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 TMEM256-PLSCR3K7ERE1 68 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 DAD1P61803 113 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
COL6A1-206ENST00000498614 Q8NDZ9 215 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 CELA1Q9UNI1 258 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 APOC4P55056 127 aa11.17□□□□□ -0.62
COL6A1-206ENST00000498614 IGLV10-54A0A075B6I4 117 aa11.17□□□□□ -0.62
COL6A1-206ENST00000498614 RPS28P62857 69 aaKnown RBP11.17□□□□□ -0.62
COL6A1-206ENST00000498614 NDUFC2O95298 119 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 TMEM258P61165 79 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 FAM19A1Q7Z5A9 133 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 S100A7L2Q5SY68 101 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 ANGP03950 147 aaKnown RBP11.15□□□□□ -0.62
COL6A1-206ENST00000498614 C6orf99Q4VX62 202 aa11.15□□□□□ -0.62
COL6A1-206ENST00000498614 TRAV23DV6A0A075B6W5 121 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 ENHOQ6UWT2 76 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 DPH3Q96FX2 82 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 HTN3P15516 51 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
COL6A1-206ENST00000498614 Q8NAQ8 132 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 GHRHP01286 108 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 COX17Q14061 63 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 ATP5EP2Q5VTU8 51 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 LYPD5Q6UWN5 251 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 REG3AQ06141 175 aa11.12□□□□□ -0.63
COL6A1-206ENST00000498614 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
COL6A1-206ENST00000498614 NOTCH1P46531 2555 aa11.11□□□□□ -0.63
COL6A1-206ENST00000498614 OXTP01178 125 aa11.11□□□□□ -0.63
COL6A1-206ENST00000498614 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
COL6A1-206ENST00000498614 MIFP14174 115 aa11.1□□□□□ -0.63
COL6A1-206ENST00000498614 UBL5Q9BZL1 73 aa11.1□□□□□ -0.63
COL6A1-206ENST00000498614 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 IGHV4-30-4P0DP06 118 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 SPART-AS1P0CW21 52 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 C10orf25Q5T742 122 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 Q6ZQT0 140 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
COL6A1-206ENST00000498614 M0R2N4 97 aa11.07□□□□□ -0.64
COL6A1-206ENST00000498614 C6orf223Q8N319 242 aa11.07□□□□□ -0.64
COL6A1-206ENST00000498614 RBM3P98179 157 aaKnown RBP11.06□□□□□ -0.64
COL6A1-206ENST00000498614 NBEAL1Q6ZS30 2694 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 TRBV10-3A0A0K0K1G6 114 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 KRTAP10-11P60412 298 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 LAMTOR3Q9UHA4 124 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 C5orf47Q569G3 176 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 LELP1Q5T871 98 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 LOC110117498A0A087WWA1 95 aa11.03□□□□□ -0.64
COL6A1-206ENST00000498614 C20orf197Q8N268 126 aa11.03□□□□□ -0.64
COL6A1-206ENST00000498614 KLK12Q9UKR0 248 aa11.03□□□□□ -0.64
COL6A1-206ENST00000498614 SPAG11BQ08648 103 aa11.02□□□□□ -0.65
COL6A1-206ENST00000498614 PRB2P02812 416 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-206ENST00000498614 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
COL6A1-206ENST00000498614 LINC01547P58512 204 aaPredicted RBP11□□□□□ -0.65
COL6A1-206ENST00000498614 Q6ZQY7 126 aa11□□□□□ -0.65
COL6A1-206ENST00000498614 WIPF1O43516 503 aa10.99□□□□□ -0.65
COL6A1-206ENST00000498614 Q6ZVQ6 151 aa10.99□□□□□ -0.65
COL6A1-206ENST00000498614 HAMPP81172 84 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 RETNQ9HD89 108 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 DNAH3Q8TD57 4116 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 A0A0J9YWU9 116 aa10.97□□□□□ -0.65
COL6A1-206ENST00000498614 PRR34Q9NV39 138 aa10.97□□□□□ -0.65
COL6A1-206ENST00000498614 TRAV10A0A0B4J240 114 aa10.96□□□□□ -0.66
COL6A1-206ENST00000498614 C4orf26Q17RF5 130 aa10.96□□□□□ -0.66
COL6A1-206ENST00000498614 Q5XG85 94 aa10.95□□□□□ -0.66
COL6A1-206ENST00000498614 TRAV7A0A075B6U4 112 aa10.95□□□□□ -0.66
COL6A1-206ENST00000498614 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
COL6A1-206ENST00000498614 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
COL6A1-206ENST00000498614 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
COL6A1-206ENST00000498614 FAM236DA0A1B0GTK5 79 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 FAM236CP0DP71 79 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 H7BZZ5 65 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 BCE1O60756 84 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 WFDC10BQ8IUB3 73 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 C6orf48Q9UBA6 75 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
COL6A1-206ENST00000498614 PDE6GP18545 87 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
COL6A1-206ENST00000498614 CXCL6P80162 114 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 Q6ZTC4 211 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 GVQW2A0A096LPI5 108 aaPredicted RBP10.89□□□□□ -0.67
COL6A1-206ENST00000498614 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
COL6A1-206ENST00000498614 TRBV7-4A0A0J9YYF1 115 aa10.88□□□□□ -0.67
COL6A1-206ENST00000498614 ZNF73O43830 326 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-206ENST00000498614 H3BQ85 93 aa10.88□□□□□ -0.67
COL6A1-206ENST00000498614 COX7BP24311 80 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms