RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 PHOX2AO14813 284 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 IGHV3-30P01768 117 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 IGHV3-33P01772 117 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 IGHV3-30-3P0DP02 117 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 IGHV3-30-5P0DP03 117 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 S100PP25815 95 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 KRTAP10-1P60331 282 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 WFDC2Q14508 124 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 MIR7-3HGQ8N6C7 128 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 OR10D4PQ8NGN7 298 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 NAT8Q9UHE5 227 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 TRAPPC1Q9Y5R8 145 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 A0A096LNJ9 63 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 TRBV27A0A0K0K1C4 114 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 TMEM218A2RU14 115 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 UBE2L6O14933 153 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 PSCAO43653 123 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 MT-ND4LP03901 98 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 ZNF25P17030 456 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 POLR2KP53803 58 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 TMEM242Q9NWH2 141 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 KLK12Q9UKR0 248 aa3.68□□□□□ -1.82
TMEM39A-212ENST00000497993 TRBV24-1A0A075B6N3 115 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 SDHAF1A6NFY7 115 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 PPP1R17O96001 155 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 MGPP08493 103 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 INAFM2P0DMQ5 153 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST1H2BOP23527 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST1H2BBP33778 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST1H2BDP58876 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST1H2BCP62807 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 CIRBPQ14011 172 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST2H2BEQ16778 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 DEFB116Q30KQ4 102 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 MRPL51Q4U2R6 128 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 C10orf91Q5T1B1 145 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 DAND5Q8N907 189 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST1H2BHQ93079 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST1H2BNQ99877 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 HIST1H2BMQ99879 126 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 VPS25Q9BRG1 176 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 SMCO4Q9NRQ5 59 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 NAT8BQ9UHF3 227 aa3.67□□□□□ -1.82
TMEM39A-212ENST00000497993 GAS8-AS1O95177 125 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 APOC3P02656 99 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 CRPP02741 224 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 ANGP03950 147 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 S100A8P05109 93 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 CNBPP62633 177 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 SLC25A34Q6PIV7 304 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 UBE2WQ96B02 151 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 IMMP2LQ96T52 175 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 HSPB8Q9UJY1 196 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
TMEM39A-212ENST00000497993 IGLV4-60A0A075B6I1 120 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 IGKV2D-24A0A075B6R9 120 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 A6NED7 52 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 I3L3M4 83 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 SMIM6P0DI80 62 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 ADCYAP1P18509 176 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 KRTAP7-1Q8IUC3 87 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 RPL39LQ96EH5 51 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 C20orf78Q9BR46 151 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.83
TMEM39A-212ENST00000497993 A8MWP4 228 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 CCL25O15444 150 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 SLC25A20O43772 301 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 KRTAP10-4P60372 401 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 ADIRFQ15847 76 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 LCA10Q71F78 164 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 LINC00269Q8N2A0 174 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 C3orf22Q8N5N4 141 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 C9orf163Q8N9P6 203 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 XAGE1AQ9HD64 81 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 PKHD1L1Q86WI1 4243 aa3.64□□□□□ -1.83
TMEM39A-212ENST00000497993 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 C7orf77A4D0Y5 90 aa3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 TMEM262E9PQX1 116 aa3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 HIST1H4AP62805 103 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 HBBP68871 147 aa3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 Q5W150 140 aa3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 C12orf57Q99622 126 aa3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 ST20Q9HBF5 79 aa3.63□□□□□ -1.83
TMEM39A-212ENST00000497993 ZNF861PO60384 105 aa3.62□□□□□ -1.83
TMEM39A-212ENST00000497993 FUSP35637 526 aaKnown RBP eCLIP3.62□□□□□ -1.83
TMEM39A-212ENST00000497993 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
TMEM39A-212ENST00000497993 Q5VSD8 79 aa3.62□□□□□ -1.83
TMEM39A-212ENST00000497993 SMIM2Q9BVW6 85 aa3.62□□□□□ -1.83
TMEM39A-212ENST00000497993 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
TMEM39A-212ENST00000497993 CDC42SE2Q9NRR3 84 aa3.62□□□□□ -1.83
TMEM39A-212ENST00000497993 LINC00587B1AMM8 73 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 K7EMI3 77 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 LECT2O14960 151 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 ZNF73O43830 326 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 MT-ND6P03923 174 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms