RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 JOSD1Q15040 202 aaPredicted RBP9.04□□□□□ -0.96
USP11-212ENST00000497179 TTTY13Q9BZ97 58 aa9.04□□□□□ -0.96
USP11-212ENST00000497179 M0QXV9 152 aa9.03□□□□□ -0.96
USP11-212ENST00000497179 PHF5AQ7RTV0 110 aaKnown RBP9.03□□□□□ -0.96
USP11-212ENST00000497179 MIR7-3HGQ8N6C7 128 aa9.03□□□□□ -0.96
USP11-212ENST00000497179 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
USP11-212ENST00000497179 TP73-AS1Q9UF72 201 aa9.02□□□□□ -0.97
USP11-212ENST00000497179 TIMM17BO60830 172 aa9.01□□□□□ -0.97
USP11-212ENST00000497179 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
USP11-212ENST00000497179 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
USP11-212ENST00000497179 PCP2Q8IVA1 136 aa9.01□□□□□ -0.97
USP11-212ENST00000497179 C22orf24Q9Y442 160 aa9.01□□□□□ -0.97
USP11-212ENST00000497179 VPREB1P12018 145 aa9□□□□□ -0.97
USP11-212ENST00000497179 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
USP11-212ENST00000497179 DAND5Q8N907 189 aa9□□□□□ -0.97
USP11-212ENST00000497179 LITAFQ99732 161 aa9□□□□□ -0.97
USP11-212ENST00000497179 ABCA13Q86UQ4 5058 aa8.99□□□□□ -0.97
USP11-212ENST00000497179 RPL24P83731 157 aaKnown RBP8.99□□□□□ -0.97
USP11-212ENST00000497179 ADAMTSL4-AS1Q5T5F5 129 aa8.99□□□□□ -0.97
USP11-212ENST00000497179 Q8NDZ9 215 aa8.99□□□□□ -0.97
USP11-212ENST00000497179 KRTAP4-5Q9BYR2 181 aa8.99□□□□□ -0.97
USP11-212ENST00000497179 LOC107984156A0A0G2JMH3 177 aa8.98□□□□□ -0.97
USP11-212ENST00000497179 LBHQ53QV2 105 aaPredicted RBP8.98□□□□□ -0.97
USP11-212ENST00000497179 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
USP11-212ENST00000497179 ARL17AQ8IVW1 177 aa8.98□□□□□ -0.97
USP11-212ENST00000497179 NKAPP1Q8N9T2 125 aa8.98□□□□□ -0.97
USP11-212ENST00000497179 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
USP11-212ENST00000497179 PYY3Q5JQD4 70 aa8.97□□□□□ -0.97
USP11-212ENST00000497179 SCGB1D4Q6XE38 83 aa8.97□□□□□ -0.97
USP11-212ENST00000497179 UBE2BP63146 152 aa8.96□□□□□ -0.98
USP11-212ENST00000497179 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
USP11-212ENST00000497179 BOD1L2Q8IYS8 172 aa8.96□□□□□ -0.98
USP11-212ENST00000497179 VAMP8Q9BV40 100 aa8.96□□□□□ -0.98
USP11-212ENST00000497179 PKHD1L1Q86WI1 4243 aa8.96□□□□□ -0.98
USP11-212ENST00000497179 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
USP11-212ENST00000497179 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
USP11-212ENST00000497179 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
USP11-212ENST00000497179 MIEN1Q9BRT3 115 aa8.95□□□□□ -0.98
USP11-212ENST00000497179 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
USP11-212ENST00000497179 SPATA45Q537H7 98 aa8.94□□□□□ -0.98
USP11-212ENST00000497179 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
USP11-212ENST00000497179 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
USP11-212ENST00000497179 PAM16Q9Y3D7 125 aa8.94□□□□□ -0.98
USP11-212ENST00000497179 GAGE10A6NGK3 116 aa8.93□□□□□ -0.98
USP11-212ENST00000497179 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
USP11-212ENST00000497179 COX8AP10176 69 aa8.93□□□□□ -0.98
USP11-212ENST00000497179 LINC00308Q8TCZ7 52 aa8.93□□□□□ -0.98
USP11-212ENST00000497179 M0R378 163 aa8.92□□□□□ -0.98
USP11-212ENST00000497179 NDUFC2O95298 119 aa8.92□□□□□ -0.98
USP11-212ENST00000497179 NPC2P61916 151 aa8.92□□□□□ -0.98
USP11-212ENST00000497179 NCR3O14931 201 aa8.91□□□□□ -0.98
USP11-212ENST00000497179 DLEU1O43261 78 aa8.91□□□□□ -0.98
USP11-212ENST00000497179 Q6ZVH6 145 aa8.91□□□□□ -0.98
USP11-212ENST00000497179 RPL37AP8A6NKH3 93 aa8.9□□□□□ -0.98
USP11-212ENST00000497179 C1orf137Q5JT78 98 aa8.9□□□□□ -0.98
USP11-212ENST00000497179 PPDPFQ9H3Y8 114 aa8.9□□□□□ -0.98
USP11-212ENST00000497179 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
USP11-212ENST00000497179 IGLV1-50A0A075B6I6 118 aa8.89□□□□□ -0.99
USP11-212ENST00000497179 TRBV10-2A0A0K0K1G8 114 aa8.89□□□□□ -0.99
USP11-212ENST00000497179 IFITM1P13164 125 aa8.89□□□□□ -0.99
USP11-212ENST00000497179 HNRNPA3P51991 378 aaKnown RBP8.89□□□□□ -0.99
USP11-212ENST00000497179 COPS9Q8WXC6 57 aa8.89□□□□□ -0.99
USP11-212ENST00000497179 IGKV2-28A0A075B6P5 120 aa8.88□□□□□ -0.99
USP11-212ENST00000497179 IGKV2D-28P01615 120 aa8.88□□□□□ -0.99
USP11-212ENST00000497179 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
USP11-212ENST00000497179 C14orf144Q96I85 54 aa8.88□□□□□ -0.99
USP11-212ENST00000497179 SLC25A34Q6PIV7 304 aa8.87□□□□□ -0.99
USP11-212ENST00000497179 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
USP11-212ENST00000497179 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
USP11-212ENST00000497179 PCLOQ9Y6V0 5065 aa8.86□□□□□ -0.99
USP11-212ENST00000497179 BCE1O60756 84 aa8.85□□□□□ -0.99
USP11-212ENST00000497179 MUSTN1Q8IVN3 82 aa8.85□□□□□ -0.99
USP11-212ENST00000497179 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
USP11-212ENST00000497179 TRBV10-3A0A0K0K1G6 114 aa8.84□□□□□ -0.99
USP11-212ENST00000497179 PRYO14603 147 aa8.84□□□□□ -0.99
USP11-212ENST00000497179 SRSF9Q13242 221 aaKnown RBP eCLIP8.84□□□□□ -0.99
USP11-212ENST00000497179 HIGD1BQ9P298 99 aa8.84□□□□□ -0.99
USP11-212ENST00000497179 LOC105371267A0A1B0GV96 52 aa8.83□□□□□ -1
USP11-212ENST00000497179 IGLV6-57P01721 117 aa8.83□□□□□ -1
USP11-212ENST00000497179 SMIM6P0DI80 62 aa8.83□□□□□ -1
USP11-212ENST00000497179 DDTP30046 118 aa8.83□□□□□ -1
USP11-212ENST00000497179 S100A12P80511 92 aa8.83□□□□□ -1
USP11-212ENST00000497179 REG3GQ6UW15 175 aa8.83□□□□□ -1
USP11-212ENST00000497179 SPINK6Q6UWN8 80 aa8.83□□□□□ -1
USP11-212ENST00000497179 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
USP11-212ENST00000497179 FAT3Q8TDW7 4589 aa8.82□□□□□ -1
USP11-212ENST00000497179 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
USP11-212ENST00000497179 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
USP11-212ENST00000497179 LINC00518Q8N0U6 118 aa8.82□□□□□ -1
USP11-212ENST00000497179 ZNF861PO60384 105 aa8.8□□□□□ -1
USP11-212ENST00000497179 SPRR1AP35321 89 aa8.8□□□□□ -1
USP11-212ENST00000497179 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
USP11-212ENST00000497179 HIST1H4GQ99525 98 aa8.8□□□□□ -1
USP11-212ENST00000497179 RPL28P46779 137 aaKnown RBP8.79□□□□□ -1
USP11-212ENST00000497179 LINC00337Q8N6G1 96 aa8.79□□□□□ -1
USP11-212ENST00000497179 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
USP11-212ENST00000497179 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
USP11-212ENST00000497179 UBE2AP49459 152 aa8.78□□□□□ -1
USP11-212ENST00000497179 FAM19A1Q7Z5A9 133 aa8.78□□□□□ -1
USP11-212ENST00000497179 OR13C6PQ8NH95 151 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms