RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 A0A087X002 238 aa7.53□□□□□ -1.2
PTPRF-214ENST00000496043 TRAV12-1A0A0B4J245 112 aa7.53□□□□□ -1.2
PTPRF-214ENST00000496043 TSPAN13O95857 204 aa7.53□□□□□ -1.2
PTPRF-214ENST00000496043 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
PTPRF-214ENST00000496043 TMEM223A0PJW6 202 aa7.52□□□□□ -1.21
PTPRF-214ENST00000496043 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
PTPRF-214ENST00000496043 FAM19A1Q7Z5A9 133 aa7.51□□□□□ -1.21
PTPRF-214ENST00000496043 TMEM126AQ9H061 195 aa7.51□□□□□ -1.21
PTPRF-214ENST00000496043 TMEM238C9JI98 176 aa7.5□□□□□ -1.21
PTPRF-214ENST00000496043 HSBP1O75506 76 aa7.5□□□□□ -1.21
PTPRF-214ENST00000496043 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
PTPRF-214ENST00000496043 LPAP08519 4548 aa7.5□□□□□ -1.21
PTPRF-214ENST00000496043 A0A0U1RRA0 63 aa7.49□□□□□ -1.21
PTPRF-214ENST00000496043 M0R378 163 aa7.49□□□□□ -1.21
PTPRF-214ENST00000496043 PRLHP81277 87 aa7.49□□□□□ -1.21
PTPRF-214ENST00000496043 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
PTPRF-214ENST00000496043 Q8NDZ9 215 aa7.48□□□□□ -1.21
PTPRF-214ENST00000496043 IGKV2D-26A0A0A0MRZ7 120 aa7.47□□□□□ -1.21
PTPRF-214ENST00000496043 LINC00587B1AMM8 73 aa7.47□□□□□ -1.21
PTPRF-214ENST00000496043 SMIM13P0DJ93 91 aa7.47□□□□□ -1.21
PTPRF-214ENST00000496043 HERV-K104P63124 156 aa7.47□□□□□ -1.21
PTPRF-214ENST00000496043 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
PTPRF-214ENST00000496043 LINC00310P59036 64 aa7.46□□□□□ -1.22
PTPRF-214ENST00000496043 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
PTPRF-214ENST00000496043 PLEKHB2Q96CS7 222 aa7.46□□□□□ -1.22
PTPRF-214ENST00000496043 MYMXA0A1B0GTQ4 84 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BKO60814 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BJP06899 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BOP23527 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BBP33778 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BDP58876 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BCP62807 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST2H2BEQ16778 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.45□□□□□ -1.22
PTPRF-214ENST00000496043 BOD1L2Q8IYS8 172 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BHQ93079 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BNQ99877 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 HIST1H2BMQ99879 126 aa7.45□□□□□ -1.22
PTPRF-214ENST00000496043 H0Y8G0 127 aa7.44□□□□□ -1.22
PTPRF-214ENST00000496043 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
PTPRF-214ENST00000496043 MIR7-3HGQ8N6C7 128 aa7.44□□□□□ -1.22
PTPRF-214ENST00000496043 LINC00304Q8N9R0 145 aa7.44□□□□□ -1.22
PTPRF-214ENST00000496043 MAP1LC3CQ9BXW4 147 aa7.44□□□□□ -1.22
PTPRF-214ENST00000496043 NDUFA12Q9UI09 145 aa7.44□□□□□ -1.22
PTPRF-214ENST00000496043 HIGD2AQ9BW72 106 aa7.43□□□□□ -1.22
PTPRF-214ENST00000496043 SERF1AO75920 110 aa7.42□□□□□ -1.22
PTPRF-214ENST00000496043 CTAG1AP78358 180 aa7.42□□□□□ -1.22
PTPRF-214ENST00000496043 PRYO14603 147 aa7.41□□□□□ -1.22
PTPRF-214ENST00000496043 LEPROTO15243 131 aa7.41□□□□□ -1.22
PTPRF-214ENST00000496043 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
PTPRF-214ENST00000496043 NCR3O14931 201 aa7.4□□□□□ -1.22
PTPRF-214ENST00000496043 PLNP26678 52 aa7.4□□□□□ -1.22
PTPRF-214ENST00000496043 KCNQ1DNQ9H478 68 aa7.4□□□□□ -1.22
PTPRF-214ENST00000496043 FABP4P15090 132 aa7.39□□□□□ -1.23
PTPRF-214ENST00000496043 HERVK_113P61574 105 aa7.39□□□□□ -1.23
PTPRF-214ENST00000496043 S100A12P80511 92 aa7.39□□□□□ -1.23
PTPRF-214ENST00000496043 LINC00337Q8N6G1 96 aa7.39□□□□□ -1.23
PTPRF-214ENST00000496043 SPRR4Q96PI1 79 aa7.39□□□□□ -1.23
PTPRF-214ENST00000496043 ZNF706Q9Y5V0 76 aaPredicted RBP7.39□□□□□ -1.23
PTPRF-214ENST00000496043 LOC107984156A0A0G2JMH3 177 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 ETDCA0A1B0GVM5 59 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 DPM2O94777 84 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 SPRR1AP35321 89 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 SPAG11AQ6PDA7 123 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 ARL17AQ8IVW1 177 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 C3orf22Q8N5N4 141 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
PTPRF-214ENST00000496043 TRBV10-3A0A0K0K1G6 114 aa7.37□□□□□ -1.23
PTPRF-214ENST00000496043 J3QQQ9 107 aa7.37□□□□□ -1.23
PTPRF-214ENST00000496043 NMUP48645 174 aa7.37□□□□□ -1.23
PTPRF-214ENST00000496043 COA6Q5JTJ3 125 aaKnown RBP7.37□□□□□ -1.23
PTPRF-214ENST00000496043 RETNLBQ9BQ08 111 aa7.37□□□□□ -1.23
PTPRF-214ENST00000496043 IGKCP01834 107 aa7.36□□□□□ -1.23
PTPRF-214ENST00000496043 LGALS3P17931 250 aaKnown RBP7.36□□□□□ -1.23
PTPRF-214ENST00000496043 TSPEAR-AS2P59090 65 aa7.36□□□□□ -1.23
PTPRF-214ENST00000496043 C4orf48Q5BLP8 95 aa7.36□□□□□ -1.23
PTPRF-214ENST00000496043 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
PTPRF-214ENST00000496043 TRBV10-2A0A0K0K1G8 114 aa7.35□□□□□ -1.23
PTPRF-214ENST00000496043 KRTAP4-16G5E9R7 235 aaPredicted RBP7.35□□□□□ -1.23
PTPRF-214ENST00000496043 DAND5Q8N907 189 aa7.35□□□□□ -1.23
PTPRF-214ENST00000496043 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.23
PTPRF-214ENST00000496043 DDTP30046 118 aa7.34□□□□□ -1.23
PTPRF-214ENST00000496043 MIEN1Q9BRT3 115 aa7.34□□□□□ -1.23
PTPRF-214ENST00000496043 PPDPFQ9H3Y8 114 aa7.33□□□□□ -1.24
PTPRF-214ENST00000496043 B5MCH6 92 aa7.32□□□□□ -1.24
PTPRF-214ENST00000496043 NDUFC2O95298 119 aa7.32□□□□□ -1.24
PTPRF-214ENST00000496043 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
PTPRF-214ENST00000496043 SPANXB1Q9NS25 103 aaPredicted RBP7.32□□□□□ -1.24
PTPRF-214ENST00000496043 A0A0U1RQV1 116 aa7.31□□□□□ -1.24
PTPRF-214ENST00000496043 S100A7L2Q5SY68 101 aa7.31□□□□□ -1.24
PTPRF-214ENST00000496043 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
PTPRF-214ENST00000496043 GAGE2AQ6NT46 116 aa7.3□□□□□ -1.24
PTPRF-214ENST00000496043 HIST3H2BBQ8N257 126 aa7.3□□□□□ -1.24
PTPRF-214ENST00000496043 Q8NBF4 154 aa7.3□□□□□ -1.24
PTPRF-214ENST00000496043 TMA7Q9Y2S6 64 aaKnown RBP7.3□□□□□ -1.24
PTPRF-214ENST00000496043 A0A0J9YXY3 114 aa7.29□□□□□ -1.24
PTPRF-214ENST00000496043 E9PLD3 99 aa7.29□□□□□ -1.24
PTPRF-214ENST00000496043 SNRPEP62304 92 aaKnown RBP7.29□□□□□ -1.24
PTPRF-214ENST00000496043 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
PTPRF-214ENST00000496043 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 448.6 ms