RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
VARS-228ENST00000495010 NDUFA6P56556 154 aa8.03□□□□□ -1.12
VARS-228ENST00000495010 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
VARS-228ENST00000495010 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
VARS-228ENST00000495010 SMCO4Q9NRQ5 59 aa8.02□□□□□ -1.13
VARS-228ENST00000495010 IGLC3P0DOY3 106 aa8.01□□□□□ -1.13
VARS-228ENST00000495010 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
VARS-228ENST00000495010 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
VARS-228ENST00000495010 LINC01546A6NGU7 62 aa8□□□□□ -1.13
VARS-228ENST00000495010 LINC00158P58513 81 aa8□□□□□ -1.13
VARS-228ENST00000495010 FAM19A2Q8N3H0 131 aa8□□□□□ -1.13
VARS-228ENST00000495010 Q8NDZ9 215 aa8□□□□□ -1.13
VARS-228ENST00000495010 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
VARS-228ENST00000495010 SMCR5Q8TEV8 140 aa7.98□□□□□ -1.13
VARS-228ENST00000495010 PRYO14603 147 aa7.97□□□□□ -1.13
VARS-228ENST00000495010 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
VARS-228ENST00000495010 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
VARS-228ENST00000495010 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
VARS-228ENST00000495010 TMEM170BQ5T4T1 132 aa7.96□□□□□ -1.14
VARS-228ENST00000495010 IGLV9-49A0A0B4J1Y8 123 aa7.95□□□□□ -1.14
VARS-228ENST00000495010 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
VARS-228ENST00000495010 GAGE2AQ6NT46 116 aa7.95□□□□□ -1.14
VARS-228ENST00000495010 SLC25A20O43772 301 aa7.94□□□□□ -1.14
VARS-228ENST00000495010 S100PP25815 95 aa7.94□□□□□ -1.14
VARS-228ENST00000495010 RPS29P62273 56 aaKnown RBP7.94□□□□□ -1.14
VARS-228ENST00000495010 S100A12P80511 92 aa7.94□□□□□ -1.14
VARS-228ENST00000495010 MOBPQ13875 183 aa7.94□□□□□ -1.14
VARS-228ENST00000495010 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
VARS-228ENST00000495010 NCR3O14931 201 aa7.93□□□□□ -1.14
VARS-228ENST00000495010 SSBP3-AS1Q7Z2R9 100 aa7.93□□□□□ -1.14
VARS-228ENST00000495010 BOD1L2Q8IYS8 172 aa7.93□□□□□ -1.14
VARS-228ENST00000495010 Q8N377 158 aa7.93□□□□□ -1.14
VARS-228ENST00000495010 FABP9Q0Z7S8 132 aa7.92□□□□□ -1.14
VARS-228ENST00000495010 LINC00483Q53H64 154 aa7.92□□□□□ -1.14
VARS-228ENST00000495010 XP32Q5T750 250 aa7.92□□□□□ -1.14
VARS-228ENST00000495010 KCNQ1DNQ9H478 68 aa7.92□□□□□ -1.14
VARS-228ENST00000495010 C11orf86A6NJI1 115 aa7.91□□□□□ -1.14
VARS-228ENST00000495010 SPRR1AP35321 89 aa7.91□□□□□ -1.14
VARS-228ENST00000495010 COX19Q49B96 90 aa7.91□□□□□ -1.14
VARS-228ENST00000495010 BAGE3Q86Y29 109 aa7.91□□□□□ -1.14
VARS-228ENST00000495010 MEIG1Q5JSS6 88 aa7.9□□□□□ -1.14
VARS-228ENST00000495010 CLLU1Q5K131 121 aa7.9□□□□□ -1.14
VARS-228ENST00000495010 HBDP02042 147 aa7.89□□□□□ -1.15
VARS-228ENST00000495010 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
VARS-228ENST00000495010 SMIM13P0DJ93 91 aa7.89□□□□□ -1.15
VARS-228ENST00000495010 IFITM2Q01629 132 aa7.89□□□□□ -1.15
VARS-228ENST00000495010 TRBV10-3A0A0K0K1G6 114 aa7.88□□□□□ -1.15
VARS-228ENST00000495010 A0A096LNJ9 63 aa7.87□□□□□ -1.15
VARS-228ENST00000495010 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
VARS-228ENST00000495010 LINC00614P0C842 121 aa7.87□□□□□ -1.15
VARS-228ENST00000495010 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
VARS-228ENST00000495010 MIR7-3HGQ8N6C7 128 aa7.87□□□□□ -1.15
VARS-228ENST00000495010 CHTOPQ9Y3Y2 248 aaKnown RBP7.87□□□□□ -1.15
VARS-228ENST00000495010 B5MCH6 92 aa7.86□□□□□ -1.15
VARS-228ENST00000495010 PMCHL1Q16048 86 aa7.86□□□□□ -1.15
VARS-228ENST00000495010 C9orf153Q5TBE3 101 aa7.86□□□□□ -1.15
VARS-228ENST00000495010 SEC11CQ9BY50 192 aa7.86□□□□□ -1.15
VARS-228ENST00000495010 LINC00587B1AMM8 73 aa7.85□□□□□ -1.15
VARS-228ENST00000495010 TMEM223A0PJW6 202 aa7.84□□□□□ -1.15
VARS-228ENST00000495010 ERC2-IT1O76042 136 aa7.84□□□□□ -1.15
VARS-228ENST00000495010 HERV-K104P63124 156 aa7.84□□□□□ -1.15
VARS-228ENST00000495010 MT1HP80294 61 aa7.84□□□□□ -1.15
VARS-228ENST00000495010 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
VARS-228ENST00000495010 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
VARS-228ENST00000495010 DDTP30046 118 aa7.82□□□□□ -1.16
VARS-228ENST00000495010 PCOTHQ58A44 107 aa7.82□□□□□ -1.16
VARS-228ENST00000495010 C18orf32Q8TCD1 76 aa7.82□□□□□ -1.16
VARS-228ENST00000495010 URB1-AS1Q96HZ7 61 aa7.82□□□□□ -1.16
VARS-228ENST00000495010 TMEM218A2RU14 115 aa7.81□□□□□ -1.16
VARS-228ENST00000495010 UQCC3Q6UW78 93 aa7.81□□□□□ -1.16
VARS-228ENST00000495010 Q6ZRX8 168 aa7.81□□□□□ -1.16
VARS-228ENST00000495010 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
VARS-228ENST00000495010 NDUFA5Q16718 116 aa7.8□□□□□ -1.16
VARS-228ENST00000495010 KRTAP19-2Q3LHN2 52 aa7.8□□□□□ -1.16
VARS-228ENST00000495010 Q9BRP9 147 aa7.8□□□□□ -1.16
VARS-228ENST00000495010 TRAPPC1Q9Y5R8 145 aa7.8□□□□□ -1.16
VARS-228ENST00000495010 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
VARS-228ENST00000495010 TRAV12-1A0A0B4J245 112 aa7.78□□□□□ -1.16
VARS-228ENST00000495010 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
VARS-228ENST00000495010 COMMD7Q86VX2 200 aa7.78□□□□□ -1.16
VARS-228ENST00000495010 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
VARS-228ENST00000495010 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
VARS-228ENST00000495010 C9orf92A6NGG3 77 aa7.77□□□□□ -1.17
VARS-228ENST00000495010 M0R2T5 61 aa7.77□□□□□ -1.17
VARS-228ENST00000495010 IFI27L1Q96BM0 104 aa7.76□□□□□ -1.17
VARS-228ENST00000495010 MIEN1Q9BRT3 115 aa7.76□□□□□ -1.17
VARS-228ENST00000495010 RPS10P5Q9NQ39 176 aa7.76□□□□□ -1.17
VARS-228ENST00000495010 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
VARS-228ENST00000495010 HRCT1Q6UXD1 115 aa7.75□□□□□ -1.17
VARS-228ENST00000495010 SPANXB1Q9NS25 103 aaPredicted RBP7.75□□□□□ -1.17
VARS-228ENST00000495010 LORP23490 312 aaPredicted RBP7.74□□□□□ -1.17
VARS-228ENST00000495010 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
VARS-228ENST00000495010 LOC107984156A0A0G2JMH3 177 aa7.73□□□□□ -1.17
VARS-228ENST00000495010 RHEBQ15382 184 aa7.73□□□□□ -1.17
VARS-228ENST00000495010 ARL17AQ8IVW1 177 aa7.73□□□□□ -1.17
VARS-228ENST00000495010 ST20-AS1Q8NBB2 130 aa7.73□□□□□ -1.17
VARS-228ENST00000495010 HINT1P49773 126 aaPredicted RBP7.72□□□□□ -1.17
VARS-228ENST00000495010 SLC25A34Q6PIV7 304 aa7.72□□□□□ -1.17
VARS-228ENST00000495010 C5orf52A6NGY3 159 aa7.71□□□□□ -1.18
VARS-228ENST00000495010 IGLV6-57P01721 117 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms