RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ATP11AUNQ6ZP68 121 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 AKAP14Q86UN6 197 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 MMGT1Q8N4V1 131 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 LINC00846Q9NV44 126 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 DOCK11Q5JSL3 2073 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 MYH4Q9Y623 1939 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 M0R2P5 195 aa0.14□□□□□ -2.39
ITGB1-216ENST00000493758 COX4I1P13073 169 aa0.14□□□□□ -2.39
ITGB1-216ENST00000493758 EMX2Q04743 252 aa0.14□□□□□ -2.39
ITGB1-216ENST00000493758 OR2T2Q6IF00 324 aa0.14□□□□□ -2.39
ITGB1-216ENST00000493758 BPESC1Q9GZL8 116 aa0.14□□□□□ -2.39
ITGB1-216ENST00000493758 LSM2Q9Y333 95 aaKnown RBP0.14□□□□□ -2.39
ITGB1-216ENST00000493758 TRBV20-1A0A075B6N2 111 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 LYNX1G3V0Z9 82 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 SPINK1P00995 79 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 MT1FP04733 61 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 SSBP1Q04837 148 aaKnown RBP0.13□□□□□ -2.39
ITGB1-216ENST00000493758 FAM74A4Q5TZK3 123 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 DEFB104AQ8WTQ1 72 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 LZICQ8WZA0 190 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 IFI27L1Q96BM0 104 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 SAR1AQ9NR31 198 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 U3KQA8 63 aa0.13□□□□□ -2.39
ITGB1-216ENST00000493758 J3QR89 54 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 MT2AP02795 61 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 STATHP02808 62 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 APODP05090 189 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 COX6A2Q02221 97 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 SPCS2Q15005 226 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 SLC48A1Q6P1K1 146 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 C4orf33Q8N1A6 199 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 SMIM11BQ8TCY0 68 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 BATF3Q9NR55 127 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 GSKIPQ9P0R6 139 aa0.12□□□□□ -2.39
ITGB1-216ENST00000493758 MYH7P12883 1935 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 TRBV7-1A0A0A6YYK4 115 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 TRAV12-3A0A0B4J271 114 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 CCL3L1P16619 93 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 CKS1BP61024 79 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 NPC2P61916 151 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 UBA52P62987 128 aaKnown RBP0.11□□□□□ -2.39
ITGB1-216ENST00000493758 HIST1H1AQ02539 215 aaPredicted RBP0.11□□□□□ -2.39
ITGB1-216ENST00000493758 Q5BKY6 102 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 SPANXN1Q5VSR9 72 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 RPL7L1Q6DKI1 246 aaKnown RBP0.11□□□□□ -2.39
ITGB1-216ENST00000493758 CTAGE3PQ8IX95 158 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 C20orf197Q8N268 126 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 TSTD1Q8NFU3 115 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 VSTM2AQ8TAG5 236 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 FAM213BQ8TBF2 198 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 COX7B2Q8TF08 81 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 SMIM3Q9BZL3 60 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 TMEM242Q9NWH2 141 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 V9GYV3 84 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 MYOM3Q5VTT5 1437 aa0.11□□□□□ -2.39
ITGB1-216ENST00000493758 GVQW2A0A096LPI5 108 aaPredicted RBP0.1□□□□□ -2.39
ITGB1-216ENST00000493758 M0R2Z0 102 aa0.1□□□□□ -2.39
ITGB1-216ENST00000493758 IGLC6P0CF74 106 aa0.1□□□□□ -2.39
ITGB1-216ENST00000493758 LINC01545Q5VT33 79 aa0.1□□□□□ -2.39
ITGB1-216ENST00000493758 FDCSPQ8NFU4 85 aa0.1□□□□□ -2.39
ITGB1-216ENST00000493758 PSMG3Q9BT73 122 aaPredicted RBP0.1□□□□□ -2.39
ITGB1-216ENST00000493758 NDUFA12Q9UI09 145 aa0.1□□□□□ -2.39
ITGB1-216ENST00000493758 MYH6P13533 1939 aa0.09□□□□□ -2.39
ITGB1-216ENST00000493758 A0A087WTM6 91 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 FAM236AA0A1B0GUQ0 79 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 FAM236BA0A1B0GV22 79 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 A6NIN4 97 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 K7ERU9 68 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 M0R129 80 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 M0R2T5 61 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 ARPC5O15511 151 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 NMBP08949 121 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 PIRTP0C851 137 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 ACYP2P14621 99 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 RBM3P98179 157 aaKnown RBP0.09□□□□□ -2.4
ITGB1-216ENST00000493758 MIC13Q5XKP0 118 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 TCEAL4Q96EI5 215 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 RPRMQ9NS64 109 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 SCP2D1Q9UJQ7 156 aa0.09□□□□□ -2.4
ITGB1-216ENST00000493758 PLIN4Q96Q06 1357 aa0.08□□□□□ -2.4
ITGB1-216ENST00000493758 NCR2O95944 276 aa0.08□□□□□ -2.4
ITGB1-216ENST00000493758 IFNA17P01571 189 aa0.08□□□□□ -2.4
ITGB1-216ENST00000493758 TSPAN19P0C672 248 aa0.08□□□□□ -2.4
ITGB1-216ENST00000493758 KRTAP8-1Q8IUC2 63 aa0.08□□□□□ -2.4
ITGB1-216ENST00000493758 COPZ2Q9P299 210 aa0.08□□□□□ -2.4
ITGB1-216ENST00000493758 TMEM14DPA8MWL7 114 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 LINC00694P0DN24 101 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 PIPP12273 146 aaPredicted RBP0.07□□□□□ -2.4
ITGB1-216ENST00000493758 GCHFRP30047 84 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 RRAS2P62070 204 aaPredicted RBP0.07□□□□□ -2.4
ITGB1-216ENST00000493758 C9orf116Q5BN46 136 aaPredicted RBP0.07□□□□□ -2.4
ITGB1-216ENST00000493758 Q6ZRX8 168 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 Q6ZUT4 128 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 WFDC9Q8NEX5 89 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 MAFIPQ8WZ33 124 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 Q96NJ1 140 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 SPRR2GQ9BYE4 73 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 ANKRD36A6QL64 1941 aa0.07□□□□□ -2.4
ITGB1-216ENST00000493758 TRGV1A0A0A0MS02 117 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms