RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ODF1Q14990 250 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
TOP3A-207ENST00000493648 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 LINC01600Q96MT4 127 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 ERG28Q9UKR5 140 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 PLA2G2DQ9UNK4 145 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 MRPL55Q7Z7F7 128 aaKnown RBP4.28□□□□□ -1.72
TOP3A-207ENST00000493648 KRTAP11-1Q8IUC1 163 aa4.28□□□□□ -1.72
TOP3A-207ENST00000493648 DIRC1Q969H9 104 aa4.28□□□□□ -1.72
TOP3A-207ENST00000493648 ZNF625Q96I27 306 aaPredicted RBP4.28□□□□□ -1.72
TOP3A-207ENST00000493648 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
TOP3A-207ENST00000493648 LINC00587B1AMM8 73 aa4.27□□□□□ -1.73
TOP3A-207ENST00000493648 LINC00158P58513 81 aa4.27□□□□□ -1.73
TOP3A-207ENST00000493648 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
TOP3A-207ENST00000493648 NKAPP1Q8N9T2 125 aa4.27□□□□□ -1.73
TOP3A-207ENST00000493648 MAP1LC3CQ9BXW4 147 aa4.27□□□□□ -1.73
TOP3A-207ENST00000493648 IGLV5-37A0A075B6J1 123 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 DPM2O94777 84 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 S100A6P06703 90 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 MT1HL1P0DM35 61 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 PLNP26678 52 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
TOP3A-207ENST00000493648 HERV-K104P63124 156 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 LINC00167Q96N53 147 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 SND1-IT1Q9HBX3 110 aa4.26□□□□□ -1.73
TOP3A-207ENST00000493648 MYMXA0A1B0GTQ4 84 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 H0Y9J4 135 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 IGKCP01834 107 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 HERVK_113P61574 105 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 MEIG1Q5JSS6 88 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 PLEKHB2Q96CS7 222 aa4.25□□□□□ -1.73
TOP3A-207ENST00000493648 TMA7Q9Y2S6 64 aaKnown RBP4.25□□□□□ -1.73
TOP3A-207ENST00000493648 A0A0U1RRA0 63 aa4.24□□□□□ -1.73
TOP3A-207ENST00000493648 LEPROTO15243 131 aa4.24□□□□□ -1.73
TOP3A-207ENST00000493648 ZNF861PO60384 105 aa4.24□□□□□ -1.73
TOP3A-207ENST00000493648 KRTAP10-8P60410 259 aa4.24□□□□□ -1.73
TOP3A-207ENST00000493648 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
TOP3A-207ENST00000493648 NDUFA12Q9UI09 145 aa4.24□□□□□ -1.73
TOP3A-207ENST00000493648 LRP1Q07954 4544 aaKnown RBP4.24□□□□□ -1.73
TOP3A-207ENST00000493648 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
TOP3A-207ENST00000493648 HERC1Q15751 4861 aa4.23□□□□□ -1.73
TOP3A-207ENST00000493648 A6NJY4 79 aa4.23□□□□□ -1.73
TOP3A-207ENST00000493648 BCE1O60756 84 aa4.23□□□□□ -1.73
TOP3A-207ENST00000493648 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
TOP3A-207ENST00000493648 VPREB1P12018 145 aa4.23□□□□□ -1.73
TOP3A-207ENST00000493648 LGALS3P17931 250 aaKnown RBP4.23□□□□□ -1.73
TOP3A-207ENST00000493648 RPL28P46779 137 aaKnown RBP4.23□□□□□ -1.73
TOP3A-207ENST00000493648 PMCHL2Q9BQD1 86 aa4.23□□□□□ -1.73
TOP3A-207ENST00000493648 IGLV1-50A0A075B6I6 118 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 IGKV2-28A0A075B6P5 120 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 SYS1-DBNDD2H3BUS1 97 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 J3QQQ9 107 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 IGKV2D-28P01615 120 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 S100A2P29034 98 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 NMUP48645 174 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 MIR7-3HGQ8N6C7 128 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 HIST1H2BLQ99880 126 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
TOP3A-207ENST00000493648 M0R378 163 aa4.21□□□□□ -1.74
TOP3A-207ENST00000493648 UBE2AP49459 152 aa4.21□□□□□ -1.74
TOP3A-207ENST00000493648 PET117Q6UWS5 81 aa4.21□□□□□ -1.74
TOP3A-207ENST00000493648 BOD1L2Q8IYS8 172 aa4.21□□□□□ -1.74
TOP3A-207ENST00000493648 PRR26Q8N8Z3 221 aa4.21□□□□□ -1.74
TOP3A-207ENST00000493648 E9PLD3 99 aa4.2□□□□□ -1.74
TOP3A-207ENST00000493648 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
TOP3A-207ENST00000493648 TSPEAR-AS2P59090 65 aa4.2□□□□□ -1.74
TOP3A-207ENST00000493648 IGKV2D-26A0A0A0MRZ7 120 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 C3orf79P0CE67 100 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 KRTDAPP60985 99 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 S100A12P80511 92 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 LINC01545Q5VT33 79 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 FAM19A1Q7Z5A9 133 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 Q8NDZ9 215 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 MIEN1Q9BRT3 115 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 TMEM126AQ9H061 195 aa4.19□□□□□ -1.74
TOP3A-207ENST00000493648 LOC107984156A0A0G2JMH3 177 aa4.18□□□□□ -1.74
TOP3A-207ENST00000493648 C20orf202A1L168 122 aa4.18□□□□□ -1.74
TOP3A-207ENST00000493648 TMEM238C9JI98 176 aa4.18□□□□□ -1.74
TOP3A-207ENST00000493648 ARL17AQ8IVW1 177 aa4.18□□□□□ -1.74
TOP3A-207ENST00000493648 A0A0J9YXY3 114 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 PRYO14603 147 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 NCR3O14931 201 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 CRYGAP11844 174 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 AKR1D1P51857 326 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 PRLHP81277 87 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 KRTAP13-1Q8IUC0 172 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 DAND5Q8N907 189 aa4.17□□□□□ -1.74
TOP3A-207ENST00000493648 TRBV10-2A0A0K0K1G8 114 aa4.16□□□□□ -1.74
TOP3A-207ENST00000493648 LOC105371267A0A1B0GV96 52 aa4.16□□□□□ -1.74
TOP3A-207ENST00000493648 NDUFC2O95298 119 aa4.16□□□□□ -1.74
TOP3A-207ENST00000493648 TRBV10-3A0A0K0K1G6 114 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 ETDCA0A1B0GVM5 59 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 ZNF815PA8K554 130 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms