RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 IGLV7-43P04211 117 aa6.54□□□□□ -1.36
CDC42SE1-206ENST00000492796 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
CDC42SE1-206ENST00000492796 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
CDC42SE1-206ENST00000492796 DPM2O94777 84 aa6.53□□□□□ -1.36
CDC42SE1-206ENST00000492796 HERV-K104P63124 156 aa6.53□□□□□ -1.36
CDC42SE1-206ENST00000492796 IGKCP01834 107 aa6.52□□□□□ -1.37
CDC42SE1-206ENST00000492796 HERVK_113P61574 105 aa6.52□□□□□ -1.37
CDC42SE1-206ENST00000492796 COA6Q5JTJ3 125 aaKnown RBP6.52□□□□□ -1.37
CDC42SE1-206ENST00000492796 NKAPP1Q8N9T2 125 aa6.52□□□□□ -1.37
CDC42SE1-206ENST00000492796 LINC01600Q96MT4 127 aa6.52□□□□□ -1.37
CDC42SE1-206ENST00000492796 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
CDC42SE1-206ENST00000492796 LINC00587B1AMM8 73 aa6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 LEPROTO15243 131 aa6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 DIRC1Q969H9 104 aa6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
CDC42SE1-206ENST00000492796 MYMXA0A1B0GTQ4 84 aa6.5□□□□□ -1.37
CDC42SE1-206ENST00000492796 SYS1-DBNDD2H3BUS1 97 aa6.5□□□□□ -1.37
CDC42SE1-206ENST00000492796 LINC00158P58513 81 aa6.5□□□□□ -1.37
CDC42SE1-206ENST00000492796 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
CDC42SE1-206ENST00000492796 LINC00167Q96N53 147 aa6.5□□□□□ -1.37
CDC42SE1-206ENST00000492796 PMCHL2Q9BQD1 86 aa6.5□□□□□ -1.37
CDC42SE1-206ENST00000492796 LOC105371267A0A1B0GV96 52 aa6.49□□□□□ -1.37
CDC42SE1-206ENST00000492796 H0Y9J4 135 aa6.49□□□□□ -1.37
CDC42SE1-206ENST00000492796 VPREB1P12018 145 aa6.49□□□□□ -1.37
CDC42SE1-206ENST00000492796 NMUP48645 174 aa6.49□□□□□ -1.37
CDC42SE1-206ENST00000492796 J3QQQ9 107 aa6.48□□□□□ -1.37
CDC42SE1-206ENST00000492796 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
CDC42SE1-206ENST00000492796 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
CDC42SE1-206ENST00000492796 PET117Q6UWS5 81 aa6.48□□□□□ -1.37
CDC42SE1-206ENST00000492796 A0A0U1RRA0 63 aa6.47□□□□□ -1.37
CDC42SE1-206ENST00000492796 GAGE10A6NGK3 116 aa6.47□□□□□ -1.37
CDC42SE1-206ENST00000492796 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
CDC42SE1-206ENST00000492796 ZNF861PO60384 105 aa6.47□□□□□ -1.37
CDC42SE1-206ENST00000492796 BCE1O60756 84 aa6.47□□□□□ -1.37
CDC42SE1-206ENST00000492796 LGALS3P17931 250 aaKnown RBP6.47□□□□□ -1.37
CDC42SE1-206ENST00000492796 LINC01545Q5VT33 79 aa6.47□□□□□ -1.37
CDC42SE1-206ENST00000492796 E9PLD3 99 aa6.46□□□□□ -1.38
CDC42SE1-206ENST00000492796 EIF4EBP3O60516 100 aaPredicted RBP6.46□□□□□ -1.38
CDC42SE1-206ENST00000492796 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
CDC42SE1-206ENST00000492796 IGLV1-50A0A075B6I6 118 aa6.45□□□□□ -1.38
CDC42SE1-206ENST00000492796 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
CDC42SE1-206ENST00000492796 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
CDC42SE1-206ENST00000492796 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
CDC42SE1-206ENST00000492796 RPL28P46779 137 aaKnown RBP6.45□□□□□ -1.38
CDC42SE1-206ENST00000492796 TNXBP22105 4242 aa6.45□□□□□ -1.38
CDC42SE1-206ENST00000492796 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
CDC42SE1-206ENST00000492796 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
CDC42SE1-206ENST00000492796 Q8NDZ9 215 aa6.44□□□□□ -1.38
CDC42SE1-206ENST00000492796 IGKV2D-26A0A0A0MRZ7 120 aa6.43□□□□□ -1.38
CDC42SE1-206ENST00000492796 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
CDC42SE1-206ENST00000492796 C20orf202A1L168 122 aa6.43□□□□□ -1.38
CDC42SE1-206ENST00000492796 M0R378 163 aa6.43□□□□□ -1.38
CDC42SE1-206ENST00000492796 KRTDAPP60985 99 aa6.43□□□□□ -1.38
CDC42SE1-206ENST00000492796 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
CDC42SE1-206ENST00000492796 BOD1L2Q8IYS8 172 aa6.43□□□□□ -1.38
CDC42SE1-206ENST00000492796 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
CDC42SE1-206ENST00000492796 UBE2AP49459 152 aa6.42□□□□□ -1.38
CDC42SE1-206ENST00000492796 AKR1D1P51857 326 aa6.42□□□□□ -1.38
CDC42SE1-206ENST00000492796 TMEM126AQ9H061 195 aa6.42□□□□□ -1.38
CDC42SE1-206ENST00000492796 KRTAP13-1Q8IUC0 172 aa6.41□□□□□ -1.38
CDC42SE1-206ENST00000492796 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
CDC42SE1-206ENST00000492796 A0A0J9YXY3 114 aa6.4□□□□□ -1.38
CDC42SE1-206ENST00000492796 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
CDC42SE1-206ENST00000492796 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
CDC42SE1-206ENST00000492796 DAND5Q8N907 189 aa6.4□□□□□ -1.38
CDC42SE1-206ENST00000492796 PRYO14603 147 aa6.39□□□□□ -1.39
CDC42SE1-206ENST00000492796 NCR3O14931 201 aa6.39□□□□□ -1.39
CDC42SE1-206ENST00000492796 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
CDC42SE1-206ENST00000492796 PRR26Q8N8Z3 221 aa6.39□□□□□ -1.39
CDC42SE1-206ENST00000492796 TRBV10-2A0A0K0K1G8 114 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 TIMM17BO60830 172 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 NDUFC2O95298 119 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 S100A6P06703 90 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 S100A2P29034 98 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 S100A12P80511 92 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 PRLHP81277 87 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE1-206ENST00000492796 ZNF815PA8K554 130 aa6.37□□□□□ -1.39
CDC42SE1-206ENST00000492796 HIST1H2BLQ99880 126 aa6.37□□□□□ -1.39
CDC42SE1-206ENST00000492796 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
CDC42SE1-206ENST00000492796 TRBV10-3A0A0K0K1G6 114 aa6.36□□□□□ -1.39
CDC42SE1-206ENST00000492796 SPRR1AP35321 89 aa6.36□□□□□ -1.39
CDC42SE1-206ENST00000492796 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
CDC42SE1-206ENST00000492796 LINC00337Q8N6G1 96 aa6.36□□□□□ -1.39
CDC42SE1-206ENST00000492796 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
CDC42SE1-206ENST00000492796 DDTP30046 118 aa6.35□□□□□ -1.39
CDC42SE1-206ENST00000492796 SNRPEP62304 92 aaKnown RBP6.35□□□□□ -1.39
CDC42SE1-206ENST00000492796 SOSTDC1Q6X4U4 206 aa6.35□□□□□ -1.39
CDC42SE1-206ENST00000492796 LITAFQ99732 161 aa6.35□□□□□ -1.39
CDC42SE1-206ENST00000492796 NPC2P61916 151 aa6.34□□□□□ -1.39
CDC42SE1-206ENST00000492796 FAM229BQ4G0N7 80 aa6.34□□□□□ -1.39
CDC42SE1-206ENST00000492796 ANKRD39Q53RE8 183 aa6.34□□□□□ -1.39
CDC42SE1-206ENST00000492796 ATOH7Q8N100 152 aa6.34□□□□□ -1.39
CDC42SE1-206ENST00000492796 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
CDC42SE1-206ENST00000492796 TTTY13Q9BZ97 58 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms