RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 HERV-K104P63124 156 aa14.05□□□□□ -0.16
CTDSP1-211ENST00000492545 ATP6V1G1O75348 118 aa14.04□□□□□ -0.16
CTDSP1-211ENST00000492545 SERF1AO75920 110 aa14.03□□□□□ -0.16
CTDSP1-211ENST00000492545 SLC7A5P1Q8MH63 180 aa14.03□□□□□ -0.16
CTDSP1-211ENST00000492545 TMEM126AQ9H061 195 aa14.03□□□□□ -0.16
CTDSP1-211ENST00000492545 HSPB8Q9UJY1 196 aa14.03□□□□□ -0.16
CTDSP1-211ENST00000492545 A0A087X002 238 aa14□□□□□ -0.17
CTDSP1-211ENST00000492545 PLNP26678 52 aa14□□□□□ -0.17
CTDSP1-211ENST00000492545 FAM229BQ4G0N7 80 aa14□□□□□ -0.17
CTDSP1-211ENST00000492545 Q8NDZ9 215 aa14□□□□□ -0.17
CTDSP1-211ENST00000492545 NDUFA12Q9UI09 145 aa14□□□□□ -0.17
CTDSP1-211ENST00000492545 MYMXA0A1B0GTQ4 84 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 COLCA2A8K830 154 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 TMEM238C9JI98 176 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 M0R378 163 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 SMIM13P0DJ93 91 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 LINC00310P59036 64 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 MEIG1Q5JSS6 88 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 FAM19A1Q7Z5A9 133 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 TYMSOSQ8TAI1 123 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 MAP1LC3CQ9BXW4 147 aa13.99□□□□□ -0.17
CTDSP1-211ENST00000492545 A0A0U1RRA0 63 aa13.98□□□□□ -0.17
CTDSP1-211ENST00000492545 H0Y8G0 127 aa13.98□□□□□ -0.17
CTDSP1-211ENST00000492545 PRLHP81277 87 aa13.96□□□□□ -0.17
CTDSP1-211ENST00000492545 PLEKHB2Q96CS7 222 aa13.96□□□□□ -0.17
CTDSP1-211ENST00000492545 IGKV2D-26A0A0A0MRZ7 120 aa13.95□□□□□ -0.18
CTDSP1-211ENST00000492545 MIR7-3HGQ8N6C7 128 aa13.95□□□□□ -0.18
CTDSP1-211ENST00000492545 RNF213Q63HN8 5207 aa13.94□□□□□ -0.18
CTDSP1-211ENST00000492545 LEPROTO15243 131 aa13.94□□□□□ -0.18
CTDSP1-211ENST00000492545 DPM2O94777 84 aa13.94□□□□□ -0.18
CTDSP1-211ENST00000492545 BOD1L2Q8IYS8 172 aa13.94□□□□□ -0.18
CTDSP1-211ENST00000492545 FABP4P15090 132 aa13.93□□□□□ -0.18
CTDSP1-211ENST00000492545 HERVK_113P61574 105 aa13.93□□□□□ -0.18
CTDSP1-211ENST00000492545 ANAPC11Q9NYG5 84 aa13.92□□□□□ -0.18
CTDSP1-211ENST00000492545 NMUP48645 174 aa13.9□□□□□ -0.18
CTDSP1-211ENST00000492545 PRR4Q16378 134 aa13.9□□□□□ -0.18
CTDSP1-211ENST00000492545 J3QQQ9 107 aa13.89□□□□□ -0.19
CTDSP1-211ENST00000492545 PRYO14603 147 aa13.89□□□□□ -0.19
CTDSP1-211ENST00000492545 IGKCP01834 107 aa13.89□□□□□ -0.19
CTDSP1-211ENST00000492545 LOC107984156A0A0G2JMH3 177 aa13.88□□□□□ -0.19
CTDSP1-211ENST00000492545 TSPAN13O95857 204 aa13.88□□□□□ -0.19
CTDSP1-211ENST00000492545 KRTAP13-2Q52LG2 175 aa13.88□□□□□ -0.19
CTDSP1-211ENST00000492545 ARL17AQ8IVW1 177 aa13.88□□□□□ -0.19
CTDSP1-211ENST00000492545 KCNQ1DNQ9H478 68 aa13.88□□□□□ -0.19
CTDSP1-211ENST00000492545 TSPEAR-AS2P59090 65 aa13.87□□□□□ -0.19
CTDSP1-211ENST00000492545 CTAG1AP78358 180 aa13.86□□□□□ -0.19
CTDSP1-211ENST00000492545 S100A12P80511 92 aa13.86□□□□□ -0.19
CTDSP1-211ENST00000492545 LINC00337Q8N6G1 96 aa13.86□□□□□ -0.19
CTDSP1-211ENST00000492545 HIGD2AQ9BW72 106 aa13.86□□□□□ -0.19
CTDSP1-211ENST00000492545 LGALS3P17931 250 aaKnown RBP13.85□□□□□ -0.19
CTDSP1-211ENST00000492545 LPAP08519 4548 aa13.85□□□□□ -0.19
CTDSP1-211ENST00000492545 NCR3O14931 201 aa13.84□□□□□ -0.19
CTDSP1-211ENST00000492545 SPRR1AP35321 89 aa13.84□□□□□ -0.19
CTDSP1-211ENST00000492545 PMCHL2Q9BQD1 86 aa13.83□□□□□ -0.2
CTDSP1-211ENST00000492545 ZNF706Q9Y5V0 76 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-211ENST00000492545 TRBV10-2A0A0K0K1G8 114 aa13.82□□□□□ -0.2
CTDSP1-211ENST00000492545 LINC00304Q8N9R0 145 aa13.82□□□□□ -0.2
CTDSP1-211ENST00000492545 MIEN1Q9BRT3 115 aa13.8□□□□□ -0.2
CTDSP1-211ENST00000492545 TRBV10-3A0A0K0K1G6 114 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 ETDCA0A1B0GVM5 59 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BKO60814 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BJP06899 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BOP23527 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BBP33778 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BDP58876 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BCP62807 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST2H2BEQ16778 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BHQ93079 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 SPRR4Q96PI1 79 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BNQ99877 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 HIST1H2BMQ99879 126 aa13.79□□□□□ -0.2
CTDSP1-211ENST00000492545 E9PLD3 99 aa13.78□□□□□ -0.2
CTDSP1-211ENST00000492545 KRTAP4-16G5E9R7 235 aaPredicted RBP13.78□□□□□ -0.2
CTDSP1-211ENST00000492545 DAND5Q8N907 189 aa13.78□□□□□ -0.2
CTDSP1-211ENST00000492545 SYS1-DBNDD2H3BUS1 97 aa13.77□□□□□ -0.21
CTDSP1-211ENST00000492545 NDUFC2O95298 119 aa13.77□□□□□ -0.21
CTDSP1-211ENST00000492545 SPANXB1Q9NS25 103 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-211ENST00000492545 DDTP30046 118 aa13.75□□□□□ -0.21
CTDSP1-211ENST00000492545 SPAG11AQ6PDA7 123 aa13.74□□□□□ -0.21
CTDSP1-211ENST00000492545 SMCR5Q8TEV8 140 aa13.73□□□□□ -0.21
CTDSP1-211ENST00000492545 A0A0J9YXY3 114 aa13.72□□□□□ -0.21
CTDSP1-211ENST00000492545 PET117Q6UWS5 81 aa13.72□□□□□ -0.21
CTDSP1-211ENST00000492545 B5MCH6 92 aa13.7□□□□□ -0.22
CTDSP1-211ENST00000492545 S100A7L2Q5SY68 101 aa13.7□□□□□ -0.22
CTDSP1-211ENST00000492545 LINC01545Q5VT33 79 aa13.7□□□□□ -0.22
CTDSP1-211ENST00000492545 C3orf22Q8N5N4 141 aa13.7□□□□□ -0.22
CTDSP1-211ENST00000492545 IGLV6-57P01721 117 aa13.69□□□□□ -0.22
CTDSP1-211ENST00000492545 CBY1Q9Y3M2 126 aa13.68□□□□□ -0.22
CTDSP1-211ENST00000492545 ADAMTSL4-AS1Q5T5F5 129 aa13.67□□□□□ -0.22
CTDSP1-211ENST00000492545 LINC00483Q53H64 154 aa13.66□□□□□ -0.22
CTDSP1-211ENST00000492545 C4orf48Q5BLP8 95 aa13.66□□□□□ -0.22
CTDSP1-211ENST00000492545 COA6Q5JTJ3 125 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-211ENST00000492545 TIMM17BO60830 172 aa13.65□□□□□ -0.22
CTDSP1-211ENST00000492545 Q6ZRX8 168 aa13.65□□□□□ -0.22
CTDSP1-211ENST00000492545 JOSD1Q15040 202 aaPredicted RBP13.64□□□□□ -0.23
CTDSP1-211ENST00000492545 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
CTDSP1-211ENST00000492545 TRAV23DV6A0A075B6W5 121 aa13.62□□□□□ -0.23
CTDSP1-211ENST00000492545 RETNLBQ9BQ08 111 aa13.62□□□□□ -0.23
CTDSP1-211ENST00000492545 C3orf79P0CE67 100 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms