RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 H0Y8G0 127 aa16.11■□□□□ 0.17
SH3GL3-204ENST00000492099 LINC00310P59036 64 aa16.11■□□□□ 0.17
SH3GL3-204ENST00000492099 HERV-K104P63124 156 aa16.1■□□□□ 0.17
SH3GL3-204ENST00000492099 Q8NDZ9 215 aa16.1■□□□□ 0.17
SH3GL3-204ENST00000492099 A0A0U1RRA0 63 aa16.09■□□□□ 0.17
SH3GL3-204ENST00000492099 COLCA2A8K830 154 aa16.09■□□□□ 0.17
SH3GL3-204ENST00000492099 ATP6V1G1O75348 118 aa16.09■□□□□ 0.17
SH3GL3-204ENST00000492099 HSPB8Q9UJY1 196 aa16.09■□□□□ 0.17
SH3GL3-204ENST00000492099 LINC00587B1AMM8 73 aa16.08■□□□□ 0.16
SH3GL3-204ENST00000492099 CRYGAP11844 174 aa16.08■□□□□ 0.16
SH3GL3-204ENST00000492099 TMEM126AQ9H061 195 aa16.08■□□□□ 0.16
SH3GL3-204ENST00000492099 MEIG1Q5JSS6 88 aa16.07■□□□□ 0.16
SH3GL3-204ENST00000492099 TMEM238C9JI98 176 aa16.06■□□□□ 0.16
SH3GL3-204ENST00000492099 SMIM13P0DJ93 91 aa16.06■□□□□ 0.16
SH3GL3-204ENST00000492099 FAM19A1Q7Z5A9 133 aa16.06■□□□□ 0.16
SH3GL3-204ENST00000492099 NDUFA12Q9UI09 145 aa16.06■□□□□ 0.16
SH3GL3-204ENST00000492099 A0A087X002 238 aa16.05■□□□□ 0.16
SH3GL3-204ENST00000492099 PLNP26678 52 aa16.05■□□□□ 0.16
SH3GL3-204ENST00000492099 MYMXA0A1B0GTQ4 84 aa16.04■□□□□ 0.16
SH3GL3-204ENST00000492099 M0R378 163 aa16.04■□□□□ 0.16
SH3GL3-204ENST00000492099 FABP4P15090 132 aa16.03■□□□□ 0.16
SH3GL3-204ENST00000492099 PRLHP81277 87 aa16.03■□□□□ 0.16
SH3GL3-204ENST00000492099 TYMSOSQ8TAI1 123 aa16.02■□□□□ 0.16
SH3GL3-204ENST00000492099 MIR7-3HGQ8N6C7 128 aa16.01■□□□□ 0.15
SH3GL3-204ENST00000492099 MAP1LC3CQ9BXW4 147 aa16.01■□□□□ 0.15
SH3GL3-204ENST00000492099 LEPROTO15243 131 aa16■□□□□ 0.15
SH3GL3-204ENST00000492099 BOD1L2Q8IYS8 172 aa16■□□□□ 0.15
SH3GL3-204ENST00000492099 PLEKHB2Q96CS7 222 aa16■□□□□ 0.15
SH3GL3-204ENST00000492099 DPM2O94777 84 aa15.99■□□□□ 0.15
SH3GL3-204ENST00000492099 FAM229BQ4G0N7 80 aa15.99■□□□□ 0.15
SH3GL3-204ENST00000492099 ANAPC11Q9NYG5 84 aa15.99■□□□□ 0.15
SH3GL3-204ENST00000492099 HERVK_113P61574 105 aa15.98■□□□□ 0.15
SH3GL3-204ENST00000492099 IGKV2D-26A0A0A0MRZ7 120 aa15.95■□□□□ 0.14
SH3GL3-204ENST00000492099 IGKCP01834 107 aa15.95■□□□□ 0.14
SH3GL3-204ENST00000492099 TSPEAR-AS2P59090 65 aa15.95■□□□□ 0.14
SH3GL3-204ENST00000492099 J3QQQ9 107 aa15.94■□□□□ 0.14
SH3GL3-204ENST00000492099 PMCHL2Q9BQD1 86 aa15.94■□□□□ 0.14
SH3GL3-204ENST00000492099 KRTAP13-2Q52LG2 175 aa15.93■□□□□ 0.14
SH3GL3-204ENST00000492099 TSPAN13O95857 204 aa15.92■□□□□ 0.14
SH3GL3-204ENST00000492099 NMUP48645 174 aa15.92■□□□□ 0.14
SH3GL3-204ENST00000492099 PRR4Q16378 134 aa15.92■□□□□ 0.14
SH3GL3-204ENST00000492099 PRYO14603 147 aa15.91■□□□□ 0.14
SH3GL3-204ENST00000492099 NCR3O14931 201 aa15.91■□□□□ 0.14
SH3GL3-204ENST00000492099 LGALS3P17931 250 aaKnown RBP15.9■□□□□ 0.14
SH3GL3-204ENST00000492099 HIGD2AQ9BW72 106 aa15.9■□□□□ 0.14
SH3GL3-204ENST00000492099 RNF213Q63HN8 5207 aa15.9■□□□□ 0.14
SH3GL3-204ENST00000492099 LOC107984156A0A0G2JMH3 177 aa15.89■□□□□ 0.13
SH3GL3-204ENST00000492099 ARL17AQ8IVW1 177 aa15.89■□□□□ 0.13
SH3GL3-204ENST00000492099 KCNQ1DNQ9H478 68 aa15.89■□□□□ 0.13
SH3GL3-204ENST00000492099 LPAP08519 4548 aa15.88■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BKO60814 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BJP06899 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BOP23527 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BBP33778 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BDP58876 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BCP62807 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST2H2BEQ16778 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BHQ93079 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BNQ99877 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 HIST1H2BMQ99879 126 aa15.87■□□□□ 0.13
SH3GL3-204ENST00000492099 LINC00337Q8N6G1 96 aa15.86■□□□□ 0.13
SH3GL3-204ENST00000492099 SPRR1AP35321 89 aa15.85■□□□□ 0.13
SH3GL3-204ENST00000492099 S100A12P80511 92 aa15.85■□□□□ 0.13
SH3GL3-204ENST00000492099 DAND5Q8N907 189 aa15.85■□□□□ 0.13
SH3GL3-204ENST00000492099 TRBV10-3A0A0K0K1G6 114 aa15.83■□□□□ 0.12
SH3GL3-204ENST00000492099 MIEN1Q9BRT3 115 aa15.83■□□□□ 0.12
SH3GL3-204ENST00000492099 SYS1-DBNDD2H3BUS1 97 aa15.82■□□□□ 0.12
SH3GL3-204ENST00000492099 LINC00304Q8N9R0 145 aa15.82■□□□□ 0.12
SH3GL3-204ENST00000492099 ZNF706Q9Y5V0 76 aaPredicted RBP15.82■□□□□ 0.12
SH3GL3-204ENST00000492099 TRBV10-2A0A0K0K1G8 114 aa15.81■□□□□ 0.12
SH3GL3-204ENST00000492099 ETDCA0A1B0GVM5 59 aa15.81■□□□□ 0.12
SH3GL3-204ENST00000492099 E9PLD3 99 aa15.81■□□□□ 0.12
SH3GL3-204ENST00000492099 SPRR4Q96PI1 79 aa15.8■□□□□ 0.12
SH3GL3-204ENST00000492099 KRTAP4-16G5E9R7 235 aaPredicted RBP15.79■□□□□ 0.12
SH3GL3-204ENST00000492099 CTAG1AP78358 180 aa15.78■□□□□ 0.12
SH3GL3-204ENST00000492099 DDTP30046 118 aa15.77■□□□□ 0.12
SH3GL3-204ENST00000492099 SPANXB1Q9NS25 103 aaPredicted RBP15.77■□□□□ 0.12
SH3GL3-204ENST00000492099 NDUFC2O95298 119 aa15.76■□□□□ 0.11
SH3GL3-204ENST00000492099 A0A0J9YXY3 114 aa15.75■□□□□ 0.11
SH3GL3-204ENST00000492099 SMCR5Q8TEV8 140 aa15.75■□□□□ 0.11
SH3GL3-204ENST00000492099 LINC01545Q5VT33 79 aa15.74■□□□□ 0.11
SH3GL3-204ENST00000492099 PET117Q6UWS5 81 aa15.74■□□□□ 0.11
SH3GL3-204ENST00000492099 C3orf22Q8N5N4 141 aa15.74■□□□□ 0.11
SH3GL3-204ENST00000492099 S100A7L2Q5SY68 101 aa15.71■□□□□ 0.11
SH3GL3-204ENST00000492099 ADAMTSL4-AS1Q5T5F5 129 aa15.71■□□□□ 0.11
SH3GL3-204ENST00000492099 B5MCH6 92 aa15.7■□□□□ 0.1
SH3GL3-204ENST00000492099 IGLV6-57P01721 117 aa15.69■□□□□ 0.1
SH3GL3-204ENST00000492099 COA6Q5JTJ3 125 aaKnown RBP15.68■□□□□ 0.1
SH3GL3-204ENST00000492099 SPAG11AQ6PDA7 123 aa15.68■□□□□ 0.1
SH3GL3-204ENST00000492099 SOSTDC1Q6X4U4 206 aa15.68■□□□□ 0.1
SH3GL3-204ENST00000492099 NPC2P61916 151 aa15.67■□□□□ 0.1
SH3GL3-204ENST00000492099 S100A1P23297 94 aa15.66■□□□□ 0.1
SH3GL3-204ENST00000492099 C3orf79P0CE67 100 aa15.65■□□□□ 0.1
SH3GL3-204ENST00000492099 EIF4EBP3O60516 100 aaPredicted RBP15.64■□□□□ 0.09
SH3GL3-204ENST00000492099 TIMM17BO60830 172 aa15.64■□□□□ 0.09
SH3GL3-204ENST00000492099 Q6ZRX8 168 aa15.64■□□□□ 0.09
SH3GL3-204ENST00000492099 RETNLBQ9BQ08 111 aa15.64■□□□□ 0.09
SH3GL3-204ENST00000492099 PPDPFQ9H3Y8 114 aa15.64■□□□□ 0.09
SH3GL3-204ENST00000492099 TRAV23DV6A0A075B6W5 121 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms