RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 A0A1B0GUV1 79 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 KIAA0087Q14695 138 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 Q1T7F1 81 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 AKAP6Q13023 2319 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 FBN3Q75N90 2809 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 IGKV4-1P06312 121 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 COX7BP24311 80 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 KHDC1LQ5JSQ8 128 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 ZNF702PQ9H963 129 aa4.39□□□□□ -1.71
CCDC6-202ENST00000491922 CREBBPQ92793 2442 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 IGHV4-30-2A0A087WSY4 118 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 hDV103S1A0JD37 113 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 B4DSR2 109 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 CD164L2Q6UWJ8 174 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 Q8NDZ9 215 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 C19orf84I3L1E1 186 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 CCL24O00175 119 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 C4orf3Q8WVX3 66 aa4.38□□□□□ -1.71
CCDC6-202ENST00000491922 DIRC1Q969H9 104 aa4.37□□□□□ -1.71
CCDC6-202ENST00000491922 HIGD2AQ9BW72 106 aa4.37□□□□□ -1.71
CCDC6-202ENST00000491922 C9orf116Q5BN46 136 aaPredicted RBP4.37□□□□□ -1.71
CCDC6-202ENST00000491922 CELSR1Q9NYQ6 3014 aa4.36□□□□□ -1.71
CCDC6-202ENST00000491922 CCL19Q99731 98 aa4.36□□□□□ -1.71
CCDC6-202ENST00000491922 NOTCH2Q04721 2471 aa4.36□□□□□ -1.71
CCDC6-202ENST00000491922 LINC00269Q8N2A0 174 aa4.36□□□□□ -1.71
CCDC6-202ENST00000491922 DAD1P61803 113 aa4.35□□□□□ -1.71
CCDC6-202ENST00000491922 CLPSL2Q6UWE3 100 aa4.35□□□□□ -1.71
CCDC6-202ENST00000491922 Q8N9L7 120 aa4.35□□□□□ -1.71
CCDC6-202ENST00000491922 LCE6AA0A183 80 aa4.35□□□□□ -1.71
CCDC6-202ENST00000491922 CMC4P56277 68 aaPredicted RBP4.35□□□□□ -1.71
CCDC6-202ENST00000491922 Q6ZRP5 223 aa4.35□□□□□ -1.71
CCDC6-202ENST00000491922 LINC01006Q8NI28 216 aa4.35□□□□□ -1.71
CCDC6-202ENST00000491922 C11orf45Q8TAV5 145 aa4.35□□□□□ -1.71
CCDC6-202ENST00000491922 CHCHD10Q8WYQ3 142 aaPredicted RBP4.34□□□□□ -1.71
CCDC6-202ENST00000491922 ZNF73O43830 326 aaPredicted RBP4.34□□□□□ -1.72
CCDC6-202ENST00000491922 GIG44P09565 113 aaPredicted RBP4.34□□□□□ -1.72
CCDC6-202ENST00000491922 ELOF1P60002 83 aaKnown RBP4.34□□□□□ -1.72
CCDC6-202ENST00000491922 Q6YL49 198 aa4.34□□□□□ -1.72
CCDC6-202ENST00000491922 RBM12B-AS1Q9P1G2 102 aa4.34□□□□□ -1.72
CCDC6-202ENST00000491922 A0A0J9YWU9 116 aa4.33□□□□□ -1.72
CCDC6-202ENST00000491922 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
CCDC6-202ENST00000491922 GYPEP15421 78 aa4.33□□□□□ -1.72
CCDC6-202ENST00000491922 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
CCDC6-202ENST00000491922 HIGD2BQ4VC39 106 aa4.33□□□□□ -1.72
CCDC6-202ENST00000491922 LINC01356Q8N9X3 169 aa4.33□□□□□ -1.72
CCDC6-202ENST00000491922 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
CCDC6-202ENST00000491922 SPAG11BQ08648 103 aa4.32□□□□□ -1.72
CCDC6-202ENST00000491922 UNQ6190/PRO20217Q6UXQ8 127 aa4.32□□□□□ -1.72
CCDC6-202ENST00000491922 ITPR3Q14573 2671 aa4.32□□□□□ -1.72
CCDC6-202ENST00000491922 USP9YO00507 2555 aaPredicted RBP4.32□□□□□ -1.72
CCDC6-202ENST00000491922 MAP1AP78559 2803 aaPredicted RBP4.32□□□□□ -1.72
CCDC6-202ENST00000491922 APOC4P55056 127 aa4.32□□□□□ -1.72
CCDC6-202ENST00000491922 ESM1Q9NQ30 184 aa4.32□□□□□ -1.72
CCDC6-202ENST00000491922 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 H3BS24 57 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 DSCR9P59020 149 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 REG3AQ06141 175 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 CRYBG3Q68DQ2 2970 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 CSNK1G2-AS1Q8NCQ2 148 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
CCDC6-202ENST00000491922 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 FAM30AQ9NZY2 134 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 LRRK2Q5S007 2527 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 IGLV10-54A0A075B6I4 117 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 NBPF19A0A087WUL8 3843 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 GVQW2A0A096LPI5 108 aaPredicted RBP4.31□□□□□ -1.72
CCDC6-202ENST00000491922 A0A1B0GW54 56 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 LRCOL1A6NCL2 159 aa4.31□□□□□ -1.72
CCDC6-202ENST00000491922 LYRM9A8MSI8 78 aa4.3□□□□□ -1.72
CCDC6-202ENST00000491922 PSPHP1O15172 72 aa4.3□□□□□ -1.72
CCDC6-202ENST00000491922 ANGP03950 147 aaKnown RBP4.3□□□□□ -1.72
CCDC6-202ENST00000491922 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
CCDC6-202ENST00000491922 LINC00612Q8N6U2 182 aa4.3□□□□□ -1.72
CCDC6-202ENST00000491922 NBASA2RRP1 2371 aa4.3□□□□□ -1.72
CCDC6-202ENST00000491922 CSPG4Q6UVK1 2322 aa4.3□□□□□ -1.72
CCDC6-202ENST00000491922 FSHBP01225 129 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 DEFB130BP0DP73 79 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 DEFB130AP0DP74 79 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 LINC00528Q8N1L1 170 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 COL12A1Q99715 3063 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 PRO0255Q9UI72 69 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 KLK12Q9UKR0 248 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 ETDCA0A1B0GVM5 59 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 C3orf84H3BNL1 204 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 UBE2BP63146 152 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 NOTCH3Q9UM47 2321 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 HIVEP3Q5T1R4 2406 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 WNK1Q9H4A3 2382 aa4.29□□□□□ -1.72
CCDC6-202ENST00000491922 PSCAO43653 123 aa4.28□□□□□ -1.72
CCDC6-202ENST00000491922 NDUFB1O75438 58 aa4.28□□□□□ -1.72
CCDC6-202ENST00000491922 FLNCQ14315 2725 aa4.27□□□□□ -1.73
CCDC6-202ENST00000491922 A0A096LPF7 62 aa4.27□□□□□ -1.73
CCDC6-202ENST00000491922 M0R378 163 aa4.27□□□□□ -1.73
CCDC6-202ENST00000491922 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
CCDC6-202ENST00000491922 VPREB1P12018 145 aa4.27□□□□□ -1.73
CCDC6-202ENST00000491922 WFDC10AQ9H1F0 79 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms