RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 C22orf24Q9Y442 160 aa12.16□□□□□ -0.46
SEC22A-209ENST00000491366 HNRNPA3P51991 378 aaKnown RBP12.14□□□□□ -0.47
SEC22A-209ENST00000491366 IGKV2D-26A0A0A0MRZ7 120 aa12.13□□□□□ -0.47
SEC22A-209ENST00000491366 LINC00587B1AMM8 73 aa12.13□□□□□ -0.47
SEC22A-209ENST00000491366 KRTAP11-1Q8IUC1 163 aa12.13□□□□□ -0.47
SEC22A-209ENST00000491366 MIR7-3HGQ8N6C7 128 aa12.13□□□□□ -0.47
SEC22A-209ENST00000491366 PSORS1C2Q9UIG4 136 aa12.13□□□□□ -0.47
SEC22A-209ENST00000491366 PLA2G2DQ9UNK4 145 aa12.13□□□□□ -0.47
SEC22A-209ENST00000491366 AKR1D1P51857 326 aa12.12□□□□□ -0.47
SEC22A-209ENST00000491366 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
SEC22A-209ENST00000491366 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
SEC22A-209ENST00000491366 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
SEC22A-209ENST00000491366 MRPL55Q7Z7F7 128 aaKnown RBP12.11□□□□□ -0.47
SEC22A-209ENST00000491366 DAND5Q8N907 189 aa12.11□□□□□ -0.47
SEC22A-209ENST00000491366 TMA7Q9Y2S6 64 aaKnown RBP12.11□□□□□ -0.47
SEC22A-209ENST00000491366 GAGE10A6NGK3 116 aa12.1□□□□□ -0.47
SEC22A-209ENST00000491366 ANKRD39Q53RE8 183 aa12.1□□□□□ -0.47
SEC22A-209ENST00000491366 C1orf137Q5JT78 98 aa12.1□□□□□ -0.47
SEC22A-209ENST00000491366 TTTY13Q9BZ97 58 aa12.1□□□□□ -0.47
SEC22A-209ENST00000491366 TP73-AS1Q9UF72 201 aa12.1□□□□□ -0.47
SEC22A-209ENST00000491366 IGLV5-37A0A075B6J1 123 aa12.09□□□□□ -0.47
SEC22A-209ENST00000491366 A0A0J9YXY3 114 aa12.09□□□□□ -0.47
SEC22A-209ENST00000491366 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
SEC22A-209ENST00000491366 VPREB1P12018 145 aa12.08□□□□□ -0.48
SEC22A-209ENST00000491366 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
SEC22A-209ENST00000491366 Q8NDZ9 215 aa12.08□□□□□ -0.48
SEC22A-209ENST00000491366 RPL37AP8A6NKH3 93 aa12.07□□□□□ -0.48
SEC22A-209ENST00000491366 SCGB1D1O95968 90 aa12.07□□□□□ -0.48
SEC22A-209ENST00000491366 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
SEC22A-209ENST00000491366 BOD1L2Q8IYS8 172 aa12.06□□□□□ -0.48
SEC22A-209ENST00000491366 HSBP1L1C9JCN9 74 aa12.03□□□□□ -0.48
SEC22A-209ENST00000491366 NPC2P61916 151 aa12.03□□□□□ -0.48
SEC22A-209ENST00000491366 ADAMTSL4-AS1Q5T5F5 129 aa12.03□□□□□ -0.48
SEC22A-209ENST00000491366 IGKV2-28A0A075B6P5 120 aa12.02□□□□□ -0.49
SEC22A-209ENST00000491366 IGKV2D-28P01615 120 aa12.02□□□□□ -0.49
SEC22A-209ENST00000491366 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
SEC22A-209ENST00000491366 NCR3O14931 201 aa12.01□□□□□ -0.49
SEC22A-209ENST00000491366 IGLV7-43P04211 117 aa12.01□□□□□ -0.49
SEC22A-209ENST00000491366 PCP2Q8IVA1 136 aa12.01□□□□□ -0.49
SEC22A-209ENST00000491366 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
SEC22A-209ENST00000491366 SCGB1D4Q6XE38 83 aa12□□□□□ -0.49
SEC22A-209ENST00000491366 SPINK6Q6UWN8 80 aa11.99□□□□□ -0.49
SEC22A-209ENST00000491366 LITAFQ99732 161 aa11.99□□□□□ -0.49
SEC22A-209ENST00000491366 PKHD1L1Q86WI1 4243 aa11.99□□□□□ -0.49
SEC22A-209ENST00000491366 M0R378 163 aa11.98□□□□□ -0.49
SEC22A-209ENST00000491366 TIMM17BO60830 172 aa11.98□□□□□ -0.49
SEC22A-209ENST00000491366 SRSF9Q13242 221 aaKnown RBP eCLIP11.98□□□□□ -0.49
SEC22A-209ENST00000491366 IGLV1-50A0A075B6I6 118 aa11.97□□□□□ -0.49
SEC22A-209ENST00000491366 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
SEC22A-209ENST00000491366 SOSTDC1Q6X4U4 206 aa11.97□□□□□ -0.49
SEC22A-209ENST00000491366 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
SEC22A-209ENST00000491366 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.49
SEC22A-209ENST00000491366 TMEM238C9JI98 176 aa11.94□□□□□ -0.5
SEC22A-209ENST00000491366 BCE1O60756 84 aa11.94□□□□□ -0.5
SEC22A-209ENST00000491366 LINC00308Q8TCZ7 52 aa11.94□□□□□ -0.5
SEC22A-209ENST00000491366 MYCBP2O75592 4640 aa11.94□□□□□ -0.5
SEC22A-209ENST00000491366 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
SEC22A-209ENST00000491366 KRTAP29-1A8MX34 341 aaPredicted RBP11.91□□□□□ -0.5
SEC22A-209ENST00000491366 J3QL48 77 aa11.91□□□□□ -0.5
SEC22A-209ENST00000491366 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
SEC22A-209ENST00000491366 DIRC1Q969H9 104 aa11.91□□□□□ -0.5
SEC22A-209ENST00000491366 TMEM126AQ9H061 195 aa11.91□□□□□ -0.5
SEC22A-209ENST00000491366 SPANXB1Q9NS25 103 aaPredicted RBP11.91□□□□□ -0.5
SEC22A-209ENST00000491366 NDUFC2O95298 119 aa11.9□□□□□ -0.5
SEC22A-209ENST00000491366 OXTP01178 125 aa11.9□□□□□ -0.5
SEC22A-209ENST00000491366 TRBV10-3A0A0K0K1G6 114 aa11.89□□□□□ -0.51
SEC22A-209ENST00000491366 ZNF861PO60384 105 aa11.89□□□□□ -0.51
SEC22A-209ENST00000491366 UBE2AP49459 152 aa11.89□□□□□ -0.51
SEC22A-209ENST00000491366 SPANXDQ9BXN6 97 aa11.89□□□□□ -0.51
SEC22A-209ENST00000491366 SPANXCQ9NY87 97 aa11.89□□□□□ -0.51
SEC22A-209ENST00000491366 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
SEC22A-209ENST00000491366 H0Y9J4 135 aa11.88□□□□□ -0.51
SEC22A-209ENST00000491366 RPL28P46779 137 aaKnown RBP11.88□□□□□ -0.51
SEC22A-209ENST00000491366 FAM19A1Q7Z5A9 133 aa11.88□□□□□ -0.51
SEC22A-209ENST00000491366 PAM16Q9Y3D7 125 aa11.88□□□□□ -0.51
SEC22A-209ENST00000491366 DDTP30046 118 aa11.87□□□□□ -0.51
SEC22A-209ENST00000491366 S100A7L2Q5SY68 101 aa11.87□□□□□ -0.51
SEC22A-209ENST00000491366 VAMP8Q9BV40 100 aa11.87□□□□□ -0.51
SEC22A-209ENST00000491366 PRYO14603 147 aa11.86□□□□□ -0.51
SEC22A-209ENST00000491366 PRLHP81277 87 aa11.86□□□□□ -0.51
SEC22A-209ENST00000491366 SPATA45Q537H7 98 aa11.86□□□□□ -0.51
SEC22A-209ENST00000491366 COX8AP10176 69 aa11.84□□□□□ -0.51
SEC22A-209ENST00000491366 S100A12P80511 92 aa11.84□□□□□ -0.51
SEC22A-209ENST00000491366 COPS9Q8WXC6 57 aa11.84□□□□□ -0.51
SEC22A-209ENST00000491366 KCNQ1DNQ9H478 68 aa11.84□□□□□ -0.51
SEC22A-209ENST00000491366 LRP1Q07954 4544 aaKnown RBP11.83□□□□□ -0.51
SEC22A-209ENST00000491366 IFITM1P13164 125 aa11.83□□□□□ -0.52
SEC22A-209ENST00000491366 PYY3Q5JQD4 70 aa11.83□□□□□ -0.52
SEC22A-209ENST00000491366 Q6ZVH6 145 aa11.83□□□□□ -0.52
SEC22A-209ENST00000491366 MUSTN1Q8IVN3 82 aa11.83□□□□□ -0.52
SEC22A-209ENST00000491366 KRTAP13-1Q8IUC0 172 aa11.82□□□□□ -0.52
SEC22A-209ENST00000491366 C14orf144Q96I85 54 aa11.82□□□□□ -0.52
SEC22A-209ENST00000491366 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
SEC22A-209ENST00000491366 IGLV6-57P01721 117 aa11.81□□□□□ -0.52
SEC22A-209ENST00000491366 OR13C6PQ8NH95 151 aa11.81□□□□□ -0.52
SEC22A-209ENST00000491366 LINC01600Q96MT4 127 aa11.81□□□□□ -0.52
SEC22A-209ENST00000491366 ETDCA0A1B0GVM5 59 aa11.79□□□□□ -0.52
SEC22A-209ENST00000491366 TRAV23DV6A0A075B6W5 121 aa11.78□□□□□ -0.52
SEC22A-209ENST00000491366 SPRR1AP35321 89 aa11.78□□□□□ -0.52
SEC22A-209ENST00000491366 LINC00518Q8N0U6 118 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms