RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 FAM19A5Q7Z5A7 132 aaPredicted RBP1.6□□□□□ -2.15
PHC3-213ENST00000491258 MRPL55Q7Z7F7 128 aaKnown RBP1.6□□□□□ -2.15
PHC3-213ENST00000491258 PCP2Q8IVA1 136 aa1.6□□□□□ -2.15
PHC3-213ENST00000491258 FER1L6-AS1Q8NA97 138 aa1.6□□□□□ -2.15
PHC3-213ENST00000491258 AP1S3Q96PC3 154 aa1.6□□□□□ -2.15
PHC3-213ENST00000491258 ANAPC13Q9BS18 74 aa1.6□□□□□ -2.15
PHC3-213ENST00000491258 GNG13Q9P2W3 67 aa1.6□□□□□ -2.15
PHC3-213ENST00000491258 NAT8Q9UHE5 227 aa1.6□□□□□ -2.15
PHC3-213ENST00000491258 TRBV20OR9-2A0A075B6H5 130 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 IGLV10-54A0A075B6I4 117 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 A0A0U1RQV1 116 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 A0A1B0GX51 115 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 KANTRA0A1W2PQU2 76 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 H7C1H1 209 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 HLA-DQA1P01909 254 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 APOC3P02656 99 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 MGPP08493 103 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 NTF3P20783 257 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 FOXA3P55318 350 aaPredicted RBP1.59□□□□□ -2.15
PHC3-213ENST00000491258 CACNG7P62955 275 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 CENPWQ5EE01 88 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 RASL11AQ6T310 242 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 CLPSL2Q6UWE3 100 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 LYZL1Q6UWQ5 148 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 Q6ZRU5 148 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 GATD1Q8NB37 220 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 DPH3Q96FX2 82 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 TMEM243Q9BU79 118 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 CNFNQ9BYD5 112 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 MANBALQ9NQG1 85 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 SMCO4Q9NRQ5 59 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 PLAC8Q9NZF1 115 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 LAMTOR3Q9UHA4 124 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 NAT8BQ9UHF3 227 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 ERG28Q9UKR5 140 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 LAMTOR2Q9Y2Q5 125 aa1.59□□□□□ -2.15
PHC3-213ENST00000491258 FAT3Q8TDW7 4589 aa1.59□□□□□ -2.16
PHC3-213ENST00000491258 IGHV3-64A0A075B6Q5 118 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.58□□□□□ -2.16
PHC3-213ENST00000491258 TRAV26-2A0A0B4J265 109 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 FAM240AA0A1B0GVK7 77 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 MT-ND4LP03901 98 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 TRGC1P0CF51 173 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 BCL2P10415 239 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 PEA15Q15121 130 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 LYRM7Q5U5X0 104 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 C15orf56Q8N910 161 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 SPACA4Q8TDM5 124 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 SNHG12Q9BXW3 62 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 DPH3P1Q9H4G8 78 aa1.58□□□□□ -2.16
PHC3-213ENST00000491258 CARHSP1Q9Y2V2 147 aaKnown RBP1.58□□□□□ -2.16
PHC3-213ENST00000491258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.57□□□□□ -2.16
PHC3-213ENST00000491258 GVQW2A0A096LPI5 108 aaPredicted RBP1.57□□□□□ -2.16
PHC3-213ENST00000491258 IGKV3OR2-268A0A0C4DH90 116 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 TRBV6-5A0A0K0K1A5 114 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 IGKV2-29A2NJV5 120 aaPredicted RBP1.57□□□□□ -2.16
PHC3-213ENST00000491258 SDHAF1A6NFY7 115 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 C9JAW5 83 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 TMEM250H0YL14 139 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 UBE2L6O14933 153 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 CCL25O15444 150 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 NCR2O95944 276 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 FGF6P10767 208 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 COX6A2Q02221 97 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 KIAA0087Q14695 138 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 C4orf26Q17RF5 130 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 PYY3Q5JQD4 70 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 Q6ZN92 141 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 RPL39LQ96EH5 51 aaKnown RBP1.57□□□□□ -2.16
PHC3-213ENST00000491258 LINC01600Q96MT4 127 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 RNASE7Q9H1E1 156 aaKnown RBP1.57□□□□□ -2.16
PHC3-213ENST00000491258 PRO1933Q9H354 126 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 RPP21Q9H633 154 aaKnown RBP1.57□□□□□ -2.16
PHC3-213ENST00000491258 CYSLTR1Q9Y271 337 aa1.57□□□□□ -2.16
PHC3-213ENST00000491258 PKHD1L1Q86WI1 4243 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 A0A096LNI7 61 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 IGHV1-58A0A0C4DH39 117 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 IGKV2-24A0A0C4DH68 120 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 TRBV27A0A0K0K1C4 114 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 LINC00959A0A1B0GUT2 108 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 A8MWL6 223 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.56□□□□□ -2.16
PHC3-213ENST00000491258 I3L3M4 83 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 DPM2O94777 84 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 APCSP02743 223 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 XCL1P47992 114 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 UBE2AP49459 152 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 POLR2KP53803 58 aaKnown RBP1.56□□□□□ -2.16
PHC3-213ENST00000491258 PRR3P79522 188 aaKnown RBP1.56□□□□□ -2.16
PHC3-213ENST00000491258 RPL18AQ02543 176 aaKnown RBP1.56□□□□□ -2.16
PHC3-213ENST00000491258 HSD52Q0P140 79 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 PMAIP1Q13794 54 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 JOSD1Q15040 202 aaPredicted RBP1.56□□□□□ -2.16
PHC3-213ENST00000491258 AMMECR1LQ6DCA0 310 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 ZNF664Q8N3J9 261 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 ANKRD29Q8N6D5 301 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 OR10D4PQ8NGN7 298 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 TSKUQ8WUA8 353 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 LINC00526Q96FQ7 95 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 MIEN1Q9BRT3 115 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms