RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 LAMTOR2Q9Y2Q5 125 aa3.73□□□□□ -1.81
PRPF40A-210ENST00000489741 TEX43Q6ZNM6 134 aa3.72□□□□□ -1.81
PRPF40A-210ENST00000489741 Q8IZM0 81 aa3.72□□□□□ -1.81
PRPF40A-210ENST00000489741 Q8N8P6 123 aa3.72□□□□□ -1.81
PRPF40A-210ENST00000489741 VCX2Q9H322 139 aa3.72□□□□□ -1.81
PRPF40A-210ENST00000489741 RPS10P5Q9NQ39 176 aa3.72□□□□□ -1.81
PRPF40A-210ENST00000489741 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
PRPF40A-210ENST00000489741 LOC389332A0A1B0GUA5 103 aa3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 K7EMI3 77 aa3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 KRTAP13-1Q8IUC0 172 aa3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 LINC00518Q8N0U6 118 aa3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 CDKN2A-AS1Q9UH64 79 aa3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 CYSLTR1Q9Y271 337 aa3.71□□□□□ -1.82
PRPF40A-210ENST00000489741 F8VRH5 84 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 BCE1O60756 84 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 SNAPINO95295 136 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 TSPAN13O95857 204 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 CKS1BP61024 79 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 ORMDL2Q53FV1 153 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 MRPL55Q7Z7F7 128 aaKnown RBP3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 LINC00167Q96N53 147 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 C2orf88Q9BSF0 95 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 ALKBH7Q9BT30 221 aaPredicted RBP3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 MAP1LC3AQ9H492 121 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 XAGE1AQ9HD64 81 aa3.7□□□□□ -1.82
PRPF40A-210ENST00000489741 CRYGAP11844 174 aa3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 RPL28P46779 137 aaKnown RBP3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 HERVK_113P63121 156 aa3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 SEC11AP67812 179 aa3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 TOMM6Q96B49 74 aa3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 TIMM17AQ99595 171 aa3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 NXT2Q9NPJ8 142 aaKnown RBP3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 TOMM7Q9P0U1 55 aa3.69□□□□□ -1.82
PRPF40A-210ENST00000489741 A0A0U1RQV1 116 aa3.68□□□□□ -1.82
PRPF40A-210ENST00000489741 CXCL5P42830 114 aa3.68□□□□□ -1.82
PRPF40A-210ENST00000489741 RAB14P61106 215 aa3.68□□□□□ -1.82
PRPF40A-210ENST00000489741 TYMSOSQ8TAI1 123 aa3.68□□□□□ -1.82
PRPF40A-210ENST00000489741 ANAPC11Q9NYG5 84 aa3.68□□□□□ -1.82
PRPF40A-210ENST00000489741 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
PRPF40A-210ENST00000489741 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 LINC01546A6NGU7 62 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 RPL37AP8A6NKH3 93 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 MT-ND4LP03901 98 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 ADCYAP1P18509 176 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 G0S2P27469 103 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 FAM229BQ4G0N7 80 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 PDZD11Q5EBL8 140 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 ERASQ7Z444 233 aa3.67□□□□□ -1.82
PRPF40A-210ENST00000489741 COX7B2Q8TF08 81 aa3.66□□□□□ -1.82
PRPF40A-210ENST00000489741 CST9LQ9H4G1 147 aa3.66□□□□□ -1.82
PRPF40A-210ENST00000489741 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
PRPF40A-210ENST00000489741 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.83
PRPF40A-210ENST00000489741 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
PRPF40A-210ENST00000489741 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
PRPF40A-210ENST00000489741 CBY1Q9Y3M2 126 aa3.65□□□□□ -1.83
PRPF40A-210ENST00000489741 LINC01549A6NIU2 74 aa3.64□□□□□ -1.83
PRPF40A-210ENST00000489741 RAB5BP61020 215 aa3.64□□□□□ -1.83
PRPF40A-210ENST00000489741 LINC00304Q8N9R0 145 aa3.64□□□□□ -1.83
PRPF40A-210ENST00000489741 SCO1O75880 301 aa3.63□□□□□ -1.83
PRPF40A-210ENST00000489741 UBE2AP49459 152 aa3.63□□□□□ -1.83
PRPF40A-210ENST00000489741 PMVKQ15126 192 aa3.63□□□□□ -1.83
PRPF40A-210ENST00000489741 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
PRPF40A-210ENST00000489741 Q8NDZ9 215 aa3.63□□□□□ -1.83
PRPF40A-210ENST00000489741 PLEKHB2Q96CS7 222 aa3.63□□□□□ -1.83
PRPF40A-210ENST00000489741 RETNLBQ9BQ08 111 aa3.63□□□□□ -1.83
PRPF40A-210ENST00000489741 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 TRAV9-1A0A075B6T8 112 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 M0R378 163 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 SPINK8P0C7L1 97 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 IGLC3P0DOY3 106 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 NKAPP1Q8N9T2 125 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 C12orf57Q99622 126 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 GNB1LQ9BYB4 327 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 TMEM126AQ9H061 195 aa3.62□□□□□ -1.83
PRPF40A-210ENST00000489741 A0A096LNJ9 63 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 IGKV2D-26A0A0A0MRZ7 120 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 TMEM238C9JI98 176 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 ATP5LO75964 103 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 SMIM6P0DI80 62 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 COX17Q14061 63 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 Q8NBF4 154 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 SND1-IT1Q9HBX3 110 aa3.61□□□□□ -1.83
PRPF40A-210ENST00000489741 H3BRM9 83 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 PFN2P35080 140 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 PRLHP81277 87 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 SPAG11AQ6PDA7 123 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 FAM19A1Q7Z5A9 133 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 Q8N377 158 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 C3orf22Q8N5N4 141 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 ZNF625Q96I27 306 aaPredicted RBP3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 PPDPFQ9H3Y8 114 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 ERG28Q9UKR5 140 aa3.6□□□□□ -1.83
PRPF40A-210ENST00000489741 TMEM218A2RU14 115 aa3.59□□□□□ -1.83
PRPF40A-210ENST00000489741 S100PP25815 95 aa3.59□□□□□ -1.83
PRPF40A-210ENST00000489741 CLLU1Q5K131 121 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms