RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LEPROTL1O95214 131 aa6.95□□□□□ -1.3
ACTN4-206ENST00000489451 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
ACTN4-206ENST00000489451 HSPB8Q9UJY1 196 aa6.95□□□□□ -1.3
ACTN4-206ENST00000489451 H0Y8G0 127 aa6.94□□□□□ -1.3
ACTN4-206ENST00000489451 NUPR1O60356 82 aa6.94□□□□□ -1.3
ACTN4-206ENST00000489451 SERF1AO75920 110 aa6.94□□□□□ -1.3
ACTN4-206ENST00000489451 PRR4Q16378 134 aa6.94□□□□□ -1.3
ACTN4-206ENST00000489451 NKAPP1Q8N9T2 125 aa6.94□□□□□ -1.3
ACTN4-206ENST00000489451 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
ACTN4-206ENST00000489451 TMEM223A0PJW6 202 aa6.93□□□□□ -1.3
ACTN4-206ENST00000489451 RPL13AP40429 203 aaKnown RBP6.93□□□□□ -1.3
ACTN4-206ENST00000489451 ZNF625Q96I27 306 aaPredicted RBP6.93□□□□□ -1.3
ACTN4-206ENST00000489451 ATP6V1G1O75348 118 aa6.92□□□□□ -1.3
ACTN4-206ENST00000489451 RPL24P83731 157 aaKnown RBP6.92□□□□□ -1.3
ACTN4-206ENST00000489451 FABP4P15090 132 aa6.91□□□□□ -1.3
ACTN4-206ENST00000489451 PLNP26678 52 aa6.91□□□□□ -1.3
ACTN4-206ENST00000489451 LINC00158P58513 81 aa6.91□□□□□ -1.3
ACTN4-206ENST00000489451 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.3
ACTN4-206ENST00000489451 GAGE10A6NGK3 116 aa6.9□□□□□ -1.3
ACTN4-206ENST00000489451 LINC00587B1AMM8 73 aa6.9□□□□□ -1.3
ACTN4-206ENST00000489451 TSPAN13O95857 204 aa6.9□□□□□ -1.3
ACTN4-206ENST00000489451 LINC00167Q96N53 147 aa6.9□□□□□ -1.3
ACTN4-206ENST00000489451 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
ACTN4-206ENST00000489451 MUC17Q685J3 4493 aa6.9□□□□□ -1.31
ACTN4-206ENST00000489451 RPL37AP8A6NKH3 93 aa6.89□□□□□ -1.31
ACTN4-206ENST00000489451 BCE1O60756 84 aa6.89□□□□□ -1.31
ACTN4-206ENST00000489451 RPL28P46779 137 aaKnown RBP6.89□□□□□ -1.31
ACTN4-206ENST00000489451 HERV-K104P63124 156 aa6.89□□□□□ -1.31
ACTN4-206ENST00000489451 KRTAP13-1Q8IUC0 172 aa6.89□□□□□ -1.31
ACTN4-206ENST00000489451 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
ACTN4-206ENST00000489451 ANAPC11Q9NYG5 84 aa6.89□□□□□ -1.31
ACTN4-206ENST00000489451 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
ACTN4-206ENST00000489451 DPM2O94777 84 aa6.88□□□□□ -1.31
ACTN4-206ENST00000489451 LINC00310P59036 64 aa6.88□□□□□ -1.31
ACTN4-206ENST00000489451 HERVK_113P61574 105 aa6.88□□□□□ -1.31
ACTN4-206ENST00000489451 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
ACTN4-206ENST00000489451 MEIG1Q5JSS6 88 aa6.88□□□□□ -1.31
ACTN4-206ENST00000489451 SCO1O75880 301 aa6.87□□□□□ -1.31
ACTN4-206ENST00000489451 PLEKHB2Q96CS7 222 aa6.87□□□□□ -1.31
ACTN4-206ENST00000489451 NDUFA12Q9UI09 145 aa6.87□□□□□ -1.31
ACTN4-206ENST00000489451 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
ACTN4-206ENST00000489451 IGKCP01834 107 aa6.86□□□□□ -1.31
ACTN4-206ENST00000489451 IGKV2-28A0A075B6P5 120 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 LEPROTO15243 131 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 IGKV2D-28P01615 120 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 VPREB1P12018 145 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 UBE2AP49459 152 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
ACTN4-206ENST00000489451 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
ACTN4-206ENST00000489451 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
ACTN4-206ENST00000489451 CRYGAP11844 174 aa6.84□□□□□ -1.31
ACTN4-206ENST00000489451 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
ACTN4-206ENST00000489451 PMCHL2Q9BQD1 86 aa6.84□□□□□ -1.31
ACTN4-206ENST00000489451 J3QQQ9 107 aa6.83□□□□□ -1.32
ACTN4-206ENST00000489451 LGALS3P17931 250 aaKnown RBP6.83□□□□□ -1.32
ACTN4-206ENST00000489451 NMUP48645 174 aa6.83□□□□□ -1.32
ACTN4-206ENST00000489451 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
ACTN4-206ENST00000489451 M0R378 163 aa6.82□□□□□ -1.32
ACTN4-206ENST00000489451 BOD1L2Q8IYS8 172 aa6.82□□□□□ -1.32
ACTN4-206ENST00000489451 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
ACTN4-206ENST00000489451 Q8NDZ9 215 aa6.82□□□□□ -1.32
ACTN4-206ENST00000489451 SYS1-DBNDD2H3BUS1 97 aa6.81□□□□□ -1.32
ACTN4-206ENST00000489451 S100A12P80511 92 aa6.81□□□□□ -1.32
ACTN4-206ENST00000489451 TMEM126AQ9H061 195 aa6.81□□□□□ -1.32
ACTN4-206ENST00000489451 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
ACTN4-206ENST00000489451 FAM19A1Q7Z5A9 133 aa6.8□□□□□ -1.32
ACTN4-206ENST00000489451 MIEN1Q9BRT3 115 aa6.8□□□□□ -1.32
ACTN4-206ENST00000489451 TMEM238C9JI98 176 aa6.79□□□□□ -1.32
ACTN4-206ENST00000489451 TSPEAR-AS2P59090 65 aa6.79□□□□□ -1.32
ACTN4-206ENST00000489451 PRLHP81277 87 aa6.79□□□□□ -1.32
ACTN4-206ENST00000489451 PET117Q6UWS5 81 aa6.79□□□□□ -1.32
ACTN4-206ENST00000489451 E9PLD3 99 aa6.78□□□□□ -1.32
ACTN4-206ENST00000489451 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
ACTN4-206ENST00000489451 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
ACTN4-206ENST00000489451 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.33
ACTN4-206ENST00000489451 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
ACTN4-206ENST00000489451 C20orf202A1L168 122 aa6.76□□□□□ -1.33
ACTN4-206ENST00000489451 NCR3O14931 201 aa6.76□□□□□ -1.33
ACTN4-206ENST00000489451 S100A1P23297 94 aa6.76□□□□□ -1.33
ACTN4-206ENST00000489451 DAND5Q8N907 189 aa6.76□□□□□ -1.33
ACTN4-206ENST00000489451 LOC107984156A0A0G2JMH3 177 aa6.75□□□□□ -1.33
ACTN4-206ENST00000489451 PRYO14603 147 aa6.75□□□□□ -1.33
ACTN4-206ENST00000489451 KRTDAPP60985 99 aa6.75□□□□□ -1.33
ACTN4-206ENST00000489451 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
ACTN4-206ENST00000489451 ARL17AQ8IVW1 177 aa6.75□□□□□ -1.33
ACTN4-206ENST00000489451 C3orf22Q8N5N4 141 aa6.75□□□□□ -1.33
ACTN4-206ENST00000489451 TRBV10-2A0A0K0K1G8 114 aa6.74□□□□□ -1.33
ACTN4-206ENST00000489451 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
ACTN4-206ENST00000489451 AKR1D1P51857 326 aa6.74□□□□□ -1.33
ACTN4-206ENST00000489451 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms