RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 Q1RN00 199 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 GAGE2EQ4V326 116 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 PPDPFQ9H3Y8 114 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 XAGE1AQ9HD64 81 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 GAGE2DQ9UEU5 116 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 DNAH17Q9UFH2 4485 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 KMT2AQ03164 3969 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 A0A1B0GV90 55 aa4.5□□□□□ -1.69
PDAP1-203ENST00000488214 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
PDAP1-203ENST00000488214 H3BUT2 72 aa4.5□□□□□ -1.69
PDAP1-203ENST00000488214 NCR3O14931 201 aa4.5□□□□□ -1.69
PDAP1-203ENST00000488214 TSPAN13O95857 204 aa4.5□□□□□ -1.69
PDAP1-203ENST00000488214 CNBPP62633 177 aaKnown RBP4.5□□□□□ -1.69
PDAP1-203ENST00000488214 A0A087WTM6 91 aa4.49□□□□□ -1.69
PDAP1-203ENST00000488214 C9orf118A6NHY6 69 aa4.49□□□□□ -1.69
PDAP1-203ENST00000488214 GAGE2BQ13066 116 aa4.49□□□□□ -1.69
PDAP1-203ENST00000488214 RNF151Q2KHN1 245 aa4.49□□□□□ -1.69
PDAP1-203ENST00000488214 Q6ZRP5 223 aa4.49□□□□□ -1.69
PDAP1-203ENST00000488214 Q8N814 137 aa4.49□□□□□ -1.69
PDAP1-203ENST00000488214 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
PDAP1-203ENST00000488214 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 LOC107984640A0A0U1RRK4 108 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 LCE6AA0A183 80 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 GHRHP01286 108 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 TLX1NBP0CAT3 122 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 LINC00337Q8N6G1 96 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 Q8NDZ9 215 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 OR13C6PQ8NH95 151 aa4.48□□□□□ -1.69
PDAP1-203ENST00000488214 FRAS1Q86XX4 4008 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 TRAV13-2A0A0B4J235 113 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 IGKV2-24A0A0C4DH68 120 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 LOC107984156A0A0G2JMH3 177 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 NDUFC2O95298 119 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 PSMB2P49721 201 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 C9orf129Q5T035 196 aaKnown RBP4.47□□□□□ -1.69
PDAP1-203ENST00000488214 ARL17AQ8IVW1 177 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 PKIGQ9Y2B9 76 aa4.47□□□□□ -1.69
PDAP1-203ENST00000488214 A0A096LNI7 61 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 RTL8CO15255 209 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 VPREB1P12018 145 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 FABP2P12104 132 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 FUSP35637 526 aaKnown RBP eCLIP4.46□□□□□ -1.74e-6■■■□□ 17.9
PDAP1-203ENST00000488214 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
PDAP1-203ENST00000488214 VAMP3Q15836 100 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 S100A7L2Q5SY68 101 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 LYRM7Q5U5X0 104 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
PDAP1-203ENST00000488214 NKAPP1Q8N9T2 125 aa4.46□□□□□ -1.7
PDAP1-203ENST00000488214 RYR2Q92736 4967 aa4.45□□□□□ -1.7
PDAP1-203ENST00000488214 IGLV5-52A0A0A0MRZ9 124 aa4.45□□□□□ -1.7
PDAP1-203ENST00000488214 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
PDAP1-203ENST00000488214 TRIAP1O43715 76 aa4.45□□□□□ -1.7
PDAP1-203ENST00000488214 CHTF8P0CG12 524 aa4.45□□□□□ -1.7
PDAP1-203ENST00000488214 SERTAD4-AS1Q5TG53 156 aa4.45□□□□□ -1.7
PDAP1-203ENST00000488214 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
PDAP1-203ENST00000488214 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
PDAP1-203ENST00000488214 C16orf90A8MZG2 172 aa4.44□□□□□ -1.7
PDAP1-203ENST00000488214 SCGB1C2P0DMR2 95 aa4.44□□□□□ -1.7
PDAP1-203ENST00000488214 C9orf163Q8N9P6 203 aa4.44□□□□□ -1.7
PDAP1-203ENST00000488214 FAT2Q9NYQ8 4349 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 TRBV10-3A0A0K0K1G6 114 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 GAGE10A6NGK3 116 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 K7EP34 96 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 M0R378 163 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 SMIM11BQ8TCY0 68 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 TMEM126AQ9H061 195 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
PDAP1-203ENST00000488214 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 TRAV23DV6A0A075B6W5 121 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 M0QXV9 152 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 IGLV6-57P01721 117 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 COX6CP09669 75 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 GTF2H5Q6ZYL4 71 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 CLEC2BQ92478 149 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 PLA2G2DQ9UNK4 145 aa4.42□□□□□ -1.7
PDAP1-203ENST00000488214 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
PDAP1-203ENST00000488214 TCL1BO95988 128 aa4.41□□□□□ -1.7
PDAP1-203ENST00000488214 RPL28P46779 137 aaKnown RBP4.41□□□□□ -1.7
PDAP1-203ENST00000488214 KRTAP10-2P60368 255 aa4.41□□□□□ -1.7
PDAP1-203ENST00000488214 LINC00474Q9P2X8 69 aa4.41□□□□□ -1.7
PDAP1-203ENST00000488214 PANO1I0J062 215 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 ATXN8Q156A1 80 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 C6orf99Q4VX62 202 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 SDIM1Q6ZPB5 146 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
PDAP1-203ENST00000488214 KRTAP7-1Q8IUC3 87 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 DIRC1Q969H9 104 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
PDAP1-203ENST00000488214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
PDAP1-203ENST00000488214 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
PDAP1-203ENST00000488214 KMT2CQ8NEZ4 4911 aaKnown RBP4.39□□□□□ -1.71
PDAP1-203ENST00000488214 A0A1W2PNN7 141 aa4.39□□□□□ -1.71
PDAP1-203ENST00000488214 RPL37AP8A6NKH3 93 aa4.39□□□□□ -1.71
PDAP1-203ENST00000488214 H3BMG7 143 aa4.39□□□□□ -1.71
PDAP1-203ENST00000488214 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms