RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 IGLV9-49A0A0B4J1Y8 123 aa4.18□□□□□ -1.74
PDPN-205ENST00000487038 H3BRM9 83 aa4.18□□□□□ -1.74
PDPN-205ENST00000487038 SRP19P09132 144 aaKnown RBP4.18□□□□□ -1.74
PDPN-205ENST00000487038 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
PDPN-205ENST00000487038 SSBP3-AS1Q7Z2R9 100 aa4.18□□□□□ -1.74
PDPN-205ENST00000487038 NAT8Q9UHE5 227 aa4.18□□□□□ -1.74
PDPN-205ENST00000487038 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
PDPN-205ENST00000487038 PRYO14603 147 aa4.17□□□□□ -1.74
PDPN-205ENST00000487038 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
PDPN-205ENST00000487038 ALKAL2Q6UX46 152 aa4.17□□□□□ -1.74
PDPN-205ENST00000487038 MRPL18Q9H0U6 180 aaKnown RBP4.17□□□□□ -1.74
PDPN-205ENST00000487038 NXT2Q9NPJ8 142 aaKnown RBP4.17□□□□□ -1.74
PDPN-205ENST00000487038 BATF3Q9NR55 127 aa4.17□□□□□ -1.74
PDPN-205ENST00000487038 ERG28Q9UKR5 140 aa4.17□□□□□ -1.74
PDPN-205ENST00000487038 ETDCA0A1B0GVM5 59 aa4.16□□□□□ -1.74
PDPN-205ENST00000487038 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
PDPN-205ENST00000487038 S100A12P80511 92 aa4.16□□□□□ -1.74
PDPN-205ENST00000487038 SFTA2Q6UW10 78 aa4.16□□□□□ -1.74
PDPN-205ENST00000487038 ERASQ7Z444 233 aa4.16□□□□□ -1.74
PDPN-205ENST00000487038 SMCR5Q8TEV8 140 aa4.16□□□□□ -1.74
PDPN-205ENST00000487038 TOMM6Q96B49 74 aa4.16□□□□□ -1.74
PDPN-205ENST00000487038 GAGE2AQ6NT46 116 aa4.15□□□□□ -1.75
PDPN-205ENST00000487038 SCGB3A1Q96QR1 104 aa4.15□□□□□ -1.75
PDPN-205ENST00000487038 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
PDPN-205ENST00000487038 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
PDPN-205ENST00000487038 C9orf92A6NGG3 77 aa4.14□□□□□ -1.75
PDPN-205ENST00000487038 C9orf153Q5TBE3 101 aa4.14□□□□□ -1.75
PDPN-205ENST00000487038 CFC1P0CG37 223 aa4.13□□□□□ -1.75
PDPN-205ENST00000487038 TCTE3Q8IZS6 198 aa4.13□□□□□ -1.75
PDPN-205ENST00000487038 SPRR1AP35321 89 aa4.12□□□□□ -1.75
PDPN-205ENST00000487038 PMVKQ15126 192 aa4.12□□□□□ -1.75
PDPN-205ENST00000487038 Q8NDZ9 215 aa4.12□□□□□ -1.75
PDPN-205ENST00000487038 ZNF625Q96I27 306 aaPredicted RBP4.12□□□□□ -1.75
PDPN-205ENST00000487038 IGLV5-39A0A0G2JS06 123 aa4.11□□□□□ -1.75
PDPN-205ENST00000487038 IGLV6-57P01721 117 aa4.11□□□□□ -1.75
PDPN-205ENST00000487038 LINC00158P58513 81 aa4.11□□□□□ -1.75
PDPN-205ENST00000487038 KCNQ1DNQ9H478 68 aa4.11□□□□□ -1.75
PDPN-205ENST00000487038 CST9LQ9H4G1 147 aa4.11□□□□□ -1.75
PDPN-205ENST00000487038 TRAV9-1A0A075B6T8 112 aa4.1□□□□□ -1.75
PDPN-205ENST00000487038 NCR3O14931 201 aa4.1□□□□□ -1.75
PDPN-205ENST00000487038 ATP6V1G1O75348 118 aa4.1□□□□□ -1.75
PDPN-205ENST00000487038 ADCYAP1P18509 176 aa4.1□□□□□ -1.75
PDPN-205ENST00000487038 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.75
PDPN-205ENST00000487038 IGLC3P0DOY3 106 aa4.09□□□□□ -1.75
PDPN-205ENST00000487038 PEA15Q15121 130 aa4.09□□□□□ -1.75
PDPN-205ENST00000487038 B5MCH6 92 aa4.08□□□□□ -1.76
PDPN-205ENST00000487038 BOD1L2Q8IYS8 172 aa4.08□□□□□ -1.76
PDPN-205ENST00000487038 TRBV10-3A0A0K0K1G6 114 aa4.07□□□□□ -1.76
PDPN-205ENST00000487038 ERC2-IT1O76042 136 aa4.07□□□□□ -1.76
PDPN-205ENST00000487038 ZNF22P17026 224 aaPredicted RBP4.07□□□□□ -1.76
PDPN-205ENST00000487038 RPL37P61927 97 aaKnown RBP4.07□□□□□ -1.76
PDPN-205ENST00000487038 JOSD1Q15040 202 aaPredicted RBP4.07□□□□□ -1.76
PDPN-205ENST00000487038 Q6ZRX8 168 aa4.07□□□□□ -1.76
PDPN-205ENST00000487038 FA2HQ7L5A8 372 aa4.07□□□□□ -1.76
PDPN-205ENST00000487038 A0A0U1RRA0 63 aa4.06□□□□□ -1.76
PDPN-205ENST00000487038 NDUFA6P56556 154 aa4.06□□□□□ -1.76
PDPN-205ENST00000487038 MEIG1Q5JSS6 88 aa4.06□□□□□ -1.76
PDPN-205ENST00000487038 SLC25A34Q6PIV7 304 aa4.06□□□□□ -1.76
PDPN-205ENST00000487038 ANAPC16Q96DE5 110 aa4.06□□□□□ -1.76
PDPN-205ENST00000487038 SMCO4Q9NRQ5 59 aa4.06□□□□□ -1.76
PDPN-205ENST00000487038 C9JQL5 133 aa4.05□□□□□ -1.76
PDPN-205ENST00000487038 TMEM170BQ5T4T1 132 aa4.05□□□□□ -1.76
PDPN-205ENST00000487038 Q6Q795 121 aa4.05□□□□□ -1.76
PDPN-205ENST00000487038 HRCT1Q6UXD1 115 aa4.05□□□□□ -1.76
PDPN-205ENST00000487038 Q9BRP9 147 aa4.05□□□□□ -1.76
PDPN-205ENST00000487038 LINC00587B1AMM8 73 aa4.04□□□□□ -1.76
PDPN-205ENST00000487038 MT-ND4LP03901 98 aa4.04□□□□□ -1.76
PDPN-205ENST00000487038 DDTP30046 118 aa4.04□□□□□ -1.76
PDPN-205ENST00000487038 MIR7-3HGQ8N6C7 128 aa4.04□□□□□ -1.76
PDPN-205ENST00000487038 LINC01546A6NGU7 62 aa4.03□□□□□ -1.76
PDPN-205ENST00000487038 C5orf52A6NGY3 159 aa4.03□□□□□ -1.76
PDPN-205ENST00000487038 SMIM13P0DJ93 91 aa4.03□□□□□ -1.76
PDPN-205ENST00000487038 KIAA1644Q3SXP7 199 aa4.03□□□□□ -1.76
PDPN-205ENST00000487038 MAP1LC3CQ9BXW4 147 aa4.03□□□□□ -1.76
PDPN-205ENST00000487038 TRBV10-2A0A0K0K1G8 114 aa4.02□□□□□ -1.77
PDPN-205ENST00000487038 HERV-K104P63124 156 aa4.02□□□□□ -1.77
PDPN-205ENST00000487038 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
PDPN-205ENST00000487038 LINC00846Q9NV44 126 aa4.02□□□□□ -1.77
PDPN-205ENST00000487038 C11orf86A6NJI1 115 aa4.01□□□□□ -1.77
PDPN-205ENST00000487038 CD164Q04900 197 aa4.01□□□□□ -1.77
PDPN-205ENST00000487038 S100A7L2Q5SY68 101 aa4.01□□□□□ -1.77
PDPN-205ENST00000487038 MIEN1Q9BRT3 115 aa4.01□□□□□ -1.77
PDPN-205ENST00000487038 LAMTOR3Q9UHA4 124 aa4.01□□□□□ -1.77
PDPN-205ENST00000487038 TRAV23DV6A0A075B6W5 121 aa4□□□□□ -1.77
PDPN-205ENST00000487038 HINT1P49773 126 aaPredicted RBP4□□□□□ -1.77
PDPN-205ENST00000487038 ST20-AS1Q8NBB2 130 aa4□□□□□ -1.77
PDPN-205ENST00000487038 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
PDPN-205ENST00000487038 SPANXB1Q9NS25 103 aaPredicted RBP4□□□□□ -1.77
PDPN-205ENST00000487038 CBY1Q9Y3M2 126 aa4□□□□□ -1.77
PDPN-205ENST00000487038 H7C2G1 150 aa3.99□□□□□ -1.77
PDPN-205ENST00000487038 HBDP02042 147 aa3.99□□□□□ -1.77
PDPN-205ENST00000487038 COMMD7Q86VX2 200 aa3.99□□□□□ -1.77
PDPN-205ENST00000487038 BAGE3Q86Y29 109 aa3.99□□□□□ -1.77
PDPN-205ENST00000487038 TMEM223A0PJW6 202 aa3.98□□□□□ -1.77
PDPN-205ENST00000487038 C20orf202A1L168 122 aa3.98□□□□□ -1.77
PDPN-205ENST00000487038 ZNF73O43830 326 aaPredicted RBP3.98□□□□□ -1.77
PDPN-205ENST00000487038 SPRR1BP22528 89 aa3.98□□□□□ -1.77
PDPN-205ENST00000487038 Q5XG85 94 aa3.98□□□□□ -1.77
PDPN-205ENST00000487038 ATP11AUNQ6ZP68 121 aa3.98□□□□□ -1.77
PDPN-205ENST00000487038 PRO1933Q9H354 126 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms