RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 A0A0J9YXY3 114 aa7.18□□□□□ -1.26
NUP50-216ENST00000486184 M0QXV9 152 aa7.18□□□□□ -1.26
NUP50-216ENST00000486184 MIR7-3HGQ8N6C7 128 aa7.18□□□□□ -1.26
NUP50-216ENST00000486184 NKAPP1Q8N9T2 125 aa7.18□□□□□ -1.26
NUP50-216ENST00000486184 MIEN1Q9BRT3 115 aa7.18□□□□□ -1.26
NUP50-216ENST00000486184 TTTY13Q9BZ97 58 aa7.18□□□□□ -1.26
NUP50-216ENST00000486184 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
NUP50-216ENST00000486184 PLA2G1BP04054 148 aaKnown RBP7.17□□□□□ -1.26
NUP50-216ENST00000486184 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
NUP50-216ENST00000486184 Q8N1X5 172 aa7.17□□□□□ -1.26
NUP50-216ENST00000486184 VAMP8Q9BV40 100 aa7.17□□□□□ -1.26
NUP50-216ENST00000486184 KRTAP4-6Q9BYQ5 205 aa7.17□□□□□ -1.26
NUP50-216ENST00000486184 KIAA1109Q2LD37 5005 aa7.17□□□□□ -1.26
NUP50-216ENST00000486184 EPM2AB3EWF7 344 aa7.16□□□□□ -1.26
NUP50-216ENST00000486184 UBE2BP63146 152 aa7.16□□□□□ -1.26
NUP50-216ENST00000486184 Q5VSD8 79 aa7.16□□□□□ -1.26
NUP50-216ENST00000486184 DAND5Q8N907 189 aa7.16□□□□□ -1.26
NUP50-216ENST00000486184 PLA2G2DQ9UNK4 145 aa7.16□□□□□ -1.26
NUP50-216ENST00000486184 TMEM238C9JI98 176 aa7.15□□□□□ -1.26
NUP50-216ENST00000486184 TIMM17BO60830 172 aa7.15□□□□□ -1.26
NUP50-216ENST00000486184 RPL37AP61513 92 aaKnown RBP7.15□□□□□ -1.26
NUP50-216ENST00000486184 LBHQ53QV2 105 aaPredicted RBP7.15□□□□□ -1.26
NUP50-216ENST00000486184 SERTAD4-AS1Q5TG53 156 aa7.15□□□□□ -1.26
NUP50-216ENST00000486184 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.26
NUP50-216ENST00000486184 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
NUP50-216ENST00000486184 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
NUP50-216ENST00000486184 XP32Q5T750 250 aa7.14□□□□□ -1.27
NUP50-216ENST00000486184 MRPL55Q7Z7F7 128 aaKnown RBP7.14□□□□□ -1.27
NUP50-216ENST00000486184 BOD1L2Q8IYS8 172 aa7.14□□□□□ -1.27
NUP50-216ENST00000486184 DNAH8Q96JB1 4490 aa7.14□□□□□ -1.27
NUP50-216ENST00000486184 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
NUP50-216ENST00000486184 C22orf24Q9Y442 160 aa7.14□□□□□ -1.27
NUP50-216ENST00000486184 RYR1P21817 5038 aa7.13□□□□□ -1.27
NUP50-216ENST00000486184 NPC2P61916 151 aa7.13□□□□□ -1.27
NUP50-216ENST00000486184 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
NUP50-216ENST00000486184 TP73-AS1Q9UF72 201 aa7.13□□□□□ -1.27
NUP50-216ENST00000486184 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
NUP50-216ENST00000486184 IGLV5-37A0A075B6J1 123 aa7.12□□□□□ -1.27
NUP50-216ENST00000486184 H3BS24 57 aa7.12□□□□□ -1.27
NUP50-216ENST00000486184 PYY3Q5JQD4 70 aa7.12□□□□□ -1.27
NUP50-216ENST00000486184 GAGE10A6NGK3 116 aa7.11□□□□□ -1.27
NUP50-216ENST00000486184 COX8AP10176 69 aa7.11□□□□□ -1.27
NUP50-216ENST00000486184 VPREB1P12018 145 aa7.11□□□□□ -1.27
NUP50-216ENST00000486184 S100A12P80511 92 aa7.11□□□□□ -1.27
NUP50-216ENST00000486184 ADAMTSL4-AS1Q5T5F5 129 aa7.11□□□□□ -1.27
NUP50-216ENST00000486184 KRTAP7-1Q8IUC3 87 aa7.11□□□□□ -1.27
NUP50-216ENST00000486184 NCR3O14931 201 aa7.1□□□□□ -1.27
NUP50-216ENST00000486184 LINC00167Q96N53 147 aa7.1□□□□□ -1.27
NUP50-216ENST00000486184 LITAFQ99732 161 aa7.1□□□□□ -1.27
NUP50-216ENST00000486184 SPANXDQ9BXN6 97 aa7.1□□□□□ -1.27
NUP50-216ENST00000486184 SPANXCQ9NY87 97 aa7.1□□□□□ -1.27
NUP50-216ENST00000486184 LOC107984156A0A0G2JMH3 177 aa7.09□□□□□ -1.27
NUP50-216ENST00000486184 M0R378 163 aa7.09□□□□□ -1.27
NUP50-216ENST00000486184 PRR3P79522 188 aaKnown RBP7.09□□□□□ -1.27
NUP50-216ENST00000486184 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
NUP50-216ENST00000486184 Q6ZVH6 145 aa7.09□□□□□ -1.27
NUP50-216ENST00000486184 ARL17AQ8IVW1 177 aa7.09□□□□□ -1.27
NUP50-216ENST00000486184 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
NUP50-216ENST00000486184 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
NUP50-216ENST00000486184 RPL37AP8A6NKH3 93 aa7.08□□□□□ -1.28
NUP50-216ENST00000486184 IFITM1P13164 125 aa7.08□□□□□ -1.28
NUP50-216ENST00000486184 C1orf137Q5JT78 98 aa7.08□□□□□ -1.28
NUP50-216ENST00000486184 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
NUP50-216ENST00000486184 SPANXB1Q9NS25 103 aaPredicted RBP7.08□□□□□ -1.28
NUP50-216ENST00000486184 PSORS1C2Q9UIG4 136 aa7.08□□□□□ -1.28
NUP50-216ENST00000486184 IGKV2-28A0A075B6P5 120 aa7.07□□□□□ -1.28
NUP50-216ENST00000486184 DLEU1O43261 78 aa7.07□□□□□ -1.28
NUP50-216ENST00000486184 NDUFC2O95298 119 aa7.07□□□□□ -1.28
NUP50-216ENST00000486184 IGKV2D-28P01615 120 aa7.07□□□□□ -1.28
NUP50-216ENST00000486184 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
NUP50-216ENST00000486184 Q8NDZ9 215 aa7.07□□□□□ -1.28
NUP50-216ENST00000486184 S100A7L2Q5SY68 101 aa7.06□□□□□ -1.28
NUP50-216ENST00000486184 HSPG2P98160 4391 aa7.05□□□□□ -1.28
NUP50-216ENST00000486184 IGLV1-50A0A075B6I6 118 aa7.05□□□□□ -1.28
NUP50-216ENST00000486184 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
NUP50-216ENST00000486184 MUSTN1Q8IVN3 82 aa7.05□□□□□ -1.28
NUP50-216ENST00000486184 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
NUP50-216ENST00000486184 SMIM6P0DI80 62 aa7.04□□□□□ -1.28
NUP50-216ENST00000486184 DDTP30046 118 aa7.04□□□□□ -1.28
NUP50-216ENST00000486184 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
NUP50-216ENST00000486184 LINC00518Q8N0U6 118 aa7.04□□□□□ -1.28
NUP50-216ENST00000486184 HERC2O95714 4834 aa7.04□□□□□ -1.28
NUP50-216ENST00000486184 INAFM2P0DMQ5 153 aa7.03□□□□□ -1.28
NUP50-216ENST00000486184 REG3GQ6UW15 175 aa7.03□□□□□ -1.28
NUP50-216ENST00000486184 OR13C6PQ8NH95 151 aa7.03□□□□□ -1.28
NUP50-216ENST00000486184 PPDPFQ9H3Y8 114 aa7.03□□□□□ -1.28
NUP50-216ENST00000486184 CBY1Q9Y3M2 126 aa7.03□□□□□ -1.28
NUP50-216ENST00000486184 TRBV10-3A0A0K0K1G6 114 aa7.02□□□□□ -1.29
NUP50-216ENST00000486184 PRYO14603 147 aa7.02□□□□□ -1.29
NUP50-216ENST00000486184 IGLV7-43P04211 117 aa7.02□□□□□ -1.29
NUP50-216ENST00000486184 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
NUP50-216ENST00000486184 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
NUP50-216ENST00000486184 HIGD1BQ9P298 99 aa7.02□□□□□ -1.29
NUP50-216ENST00000486184 LOC105371267A0A1B0GV96 52 aa7.01□□□□□ -1.29
NUP50-216ENST00000486184 BCE1O60756 84 aa7.01□□□□□ -1.29
NUP50-216ENST00000486184 UBE2AP49459 152 aa7.01□□□□□ -1.29
NUP50-216ENST00000486184 TMEM126AQ9H061 195 aa7.01□□□□□ -1.29
NUP50-216ENST00000486184 UQCR10Q9UDW1 63 aa7.01□□□□□ -1.29
NUP50-216ENST00000486184 RPL28P46779 137 aaKnown RBP7□□□□□ -1.29
NUP50-216ENST00000486184 SPINK6Q6UWN8 80 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms