RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 Q9HAA7 133 aa6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 PRO1854Q9UHT4 67 aa6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 A4D1N5 150 aa6.2□□□□□ -1.42
TMEM39A-208ENST00000486159 GAGE10A6NGK3 116 aa6.2□□□□□ -1.42
TMEM39A-208ENST00000486159 IBA57-AS1B1ANH7 110 aa6.2□□□□□ -1.42
TMEM39A-208ENST00000486159 APOMO95445 188 aa6.2□□□□□ -1.42
TMEM39A-208ENST00000486159 PRSS2P07478 247 aa6.2□□□□□ -1.42
TMEM39A-208ENST00000486159 XCL1P47992 114 aa6.2□□□□□ -1.42
TMEM39A-208ENST00000486159 CHCHD10Q8WYQ3 142 aaPredicted RBP6.2□□□□□ -1.42
TMEM39A-208ENST00000486159 K7EP34 96 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 K7ERJ3 54 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 CRPP02741 224 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 CFC1BP0CG36 223 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 CFC1P0CG37 223 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 ADAMTSL4-AS1Q5T5F5 129 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 C5orf38Q86SI9 138 aa6.19□□□□□ -1.42
TMEM39A-208ENST00000486159 IGLV5-52A0A0A0MRZ9 124 aa6.18□□□□□ -1.42
TMEM39A-208ENST00000486159 LECT2O14960 151 aa6.18□□□□□ -1.42
TMEM39A-208ENST00000486159 MALP21145 153 aa6.18□□□□□ -1.42
TMEM39A-208ENST00000486159 LINC01556Q5JQF7 62 aa6.18□□□□□ -1.42
TMEM39A-208ENST00000486159 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
TMEM39A-208ENST00000486159 SPCS1Q9Y6A9 102 aa6.18□□□□□ -1.42
TMEM39A-208ENST00000486159 PSCAO43653 123 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 FOXI1Q12951 378 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 COX17Q14061 63 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 LINC01620Q4KN68 170 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 CFAP161Q6P656 301 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 Q8N814 137 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 KLK12Q9UKR0 248 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-208ENST00000486159 TRBV20-1A0A075B6N2 111 aa6.16□□□□□ -1.42
TMEM39A-208ENST00000486159 F8WDY8 70 aa6.16□□□□□ -1.42
TMEM39A-208ENST00000486159 TSPAN13O95857 204 aa6.16□□□□□ -1.42
TMEM39A-208ENST00000486159 CKS1BP61024 79 aa6.16□□□□□ -1.42
TMEM39A-208ENST00000486159 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
TMEM39A-208ENST00000486159 ENHOQ6UWT2 76 aa6.16□□□□□ -1.42
TMEM39A-208ENST00000486159 GAGE12HA6NDE8 117 aa6.15□□□□□ -1.42
TMEM39A-208ENST00000486159 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.14□□□□□ -1.43
TMEM39A-208ENST00000486159 LOC107984156A0A0G2JMH3 177 aa6.14□□□□□ -1.43
TMEM39A-208ENST00000486159 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
TMEM39A-208ENST00000486159 KIAA0087Q14695 138 aa6.14□□□□□ -1.43
TMEM39A-208ENST00000486159 ARL17AQ8IVW1 177 aa6.14□□□□□ -1.43
TMEM39A-208ENST00000486159 UBE2WQ96B02 151 aa6.14□□□□□ -1.43
TMEM39A-208ENST00000486159 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
TMEM39A-208ENST00000486159 IGLV10-54A0A075B6I4 117 aa6.13□□□□□ -1.43
TMEM39A-208ENST00000486159 COX6CP09669 75 aa6.13□□□□□ -1.43
TMEM39A-208ENST00000486159 LINC00158P58513 81 aa6.13□□□□□ -1.43
TMEM39A-208ENST00000486159 NAA38Q9BRA0 125 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-208ENST00000486159 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-208ENST00000486159 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
TMEM39A-208ENST00000486159 TRAV13-2A0A0B4J235 113 aa6.12□□□□□ -1.43
TMEM39A-208ENST00000486159 F8W1H4 67 aa6.12□□□□□ -1.43
TMEM39A-208ENST00000486159 SPAG11BQ08648 103 aa6.12□□□□□ -1.43
TMEM39A-208ENST00000486159 MIR7-3HGQ8N6C7 128 aa6.12□□□□□ -1.43
TMEM39A-208ENST00000486159 RMI2Q96E14 147 aa6.12□□□□□ -1.43
TMEM39A-208ENST00000486159 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
TMEM39A-208ENST00000486159 FAT3Q8TDW7 4589 aa6.11□□□□□ -1.43
TMEM39A-208ENST00000486159 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
TMEM39A-208ENST00000486159 PSMB2P49721 201 aa6.11□□□□□ -1.43
TMEM39A-208ENST00000486159 Q1RN00 199 aa6.11□□□□□ -1.43
TMEM39A-208ENST00000486159 DAND5Q8N907 189 aa6.11□□□□□ -1.43
TMEM39A-208ENST00000486159 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
TMEM39A-208ENST00000486159 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
TMEM39A-208ENST00000486159 KRTAP26-1Q6PEX3 210 aa6.1□□□□□ -1.43
TMEM39A-208ENST00000486159 SOSTDC1Q6X4U4 206 aa6.1□□□□□ -1.43
TMEM39A-208ENST00000486159 Q6ZSA8 131 aa6.1□□□□□ -1.43
TMEM39A-208ENST00000486159 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
TMEM39A-208ENST00000486159 SND1-IT1Q9HBX3 110 aa6.1□□□□□ -1.43
TMEM39A-208ENST00000486159 A0A0U1RRA0 63 aa6.09□□□□□ -1.43
TMEM39A-208ENST00000486159 NDUFC2O95298 119 aa6.09□□□□□ -1.43
TMEM39A-208ENST00000486159 PFN2P35080 140 aa6.09□□□□□ -1.43
TMEM39A-208ENST00000486159 RPL13AP40429 203 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-208ENST00000486159 NPC2P61916 151 aa6.09□□□□□ -1.43
TMEM39A-208ENST00000486159 ZNF561-AS1K7EIQ3 104 aa6.08□□□□□ -1.44
TMEM39A-208ENST00000486159 M0QXV9 152 aa6.08□□□□□ -1.44
TMEM39A-208ENST00000486159 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
TMEM39A-208ENST00000486159 ATXN8Q156A1 80 aa6.08□□□□□ -1.44
TMEM39A-208ENST00000486159 C2orf82Q6UX34 121 aa6.08□□□□□ -1.44
TMEM39A-208ENST00000486159 SCXQ7RTU7 201 aa6.08□□□□□ -1.44
TMEM39A-208ENST00000486159 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
TMEM39A-208ENST00000486159 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
TMEM39A-208ENST00000486159 IGKV2D-24A0A075B6R9 120 aa6.07□□□□□ -1.44
TMEM39A-208ENST00000486159 H3BMG7 143 aa6.07□□□□□ -1.44
TMEM39A-208ENST00000486159 H7C2G1 150 aa6.07□□□□□ -1.44
TMEM39A-208ENST00000486159 TRIAP1O43715 76 aa6.06□□□□□ -1.44
TMEM39A-208ENST00000486159 TCL1BO95988 128 aa6.06□□□□□ -1.44
TMEM39A-208ENST00000486159 RPL28P46779 137 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-208ENST00000486159 LINC01600Q96MT4 127 aa6.06□□□□□ -1.44
TMEM39A-208ENST00000486159 RNF151Q2KHN1 245 aa6.05□□□□□ -1.44
TMEM39A-208ENST00000486159 UNQ6190/PRO20217Q6UXQ8 127 aa6.05□□□□□ -1.44
TMEM39A-208ENST00000486159 CIRBP-AS1Q8TBR5 109 aa6.05□□□□□ -1.44
TMEM39A-208ENST00000486159 CAMK2N2Q96S95 79 aa6.05□□□□□ -1.44
TMEM39A-208ENST00000486159 PRO0461Q9UI25 63 aa6.05□□□□□ -1.44
TMEM39A-208ENST00000486159 IGKV2-28A0A075B6P5 120 aa6.04□□□□□ -1.44
TMEM39A-208ENST00000486159 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms