RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TYMSOS	Q8TAI1	123 aa		6.23	□□□□□ -1.41
HMGN1-215	ENST00000485550		H3BRM9	83 aa		6.22	□□□□□ -1.41
HMGN1-215	ENST00000485550	ATP5L	O75964	103 aa		6.22	□□□□□ -1.41
HMGN1-215	ENST00000485550	CRYGA	P11844	174 aa		6.22	□□□□□ -1.41
HMGN1-215	ENST00000485550	UBE2A	P49459	152 aa		6.22	□□□□□ -1.41
HMGN1-215	ENST00000485550	COMMD7	Q86VX2	200 aa		6.22	□□□□□ -1.41
HMGN1-215	ENST00000485550	RPS10P5	Q9NQ39	176 aa		6.22	□□□□□ -1.41
HMGN1-215	ENST00000485550	IGLV5-37	A0A075B6J1	123 aa		6.21	□□□□□ -1.42
HMGN1-215	ENST00000485550	COX19	Q49B96	90 aa		6.21	□□□□□ -1.42
HMGN1-215	ENST00000485550	ZNF625	Q96I27	306 aa	Predicted RBP	6.21	□□□□□ -1.42
HMGN1-215	ENST00000485550		A0A096LNJ9	63 aa		6.2	□□□□□ -1.42
HMGN1-215	ENST00000485550	IGLC3	P0DOY3	106 aa		6.2	□□□□□ -1.42
HMGN1-215	ENST00000485550	PMCHL1	Q16048	86 aa		6.2	□□□□□ -1.42
HMGN1-215	ENST00000485550	URB1-AS1	Q96HZ7	61 aa		6.2	□□□□□ -1.42
HMGN1-215	ENST00000485550	IGLV5-39	A0A0G2JS06	123 aa		6.19	□□□□□ -1.42
HMGN1-215	ENST00000485550	ZNF22	P17026	224 aa	Predicted RBP	6.19	□□□□□ -1.42
HMGN1-215	ENST00000485550	KRTAP13-2	Q52LG2	175 aa		6.19	□□□□□ -1.42
HMGN1-215	ENST00000485550	KRTAP13-1	Q8IUC0	172 aa		6.19	□□□□□ -1.42
HMGN1-215	ENST00000485550	CRCT1	Q9UGL9	99 aa		6.19	□□□□□ -1.42
HMGN1-215	ENST00000485550	TRAPPC1	Q9Y5R8	145 aa		6.19	□□□□□ -1.42
HMGN1-215	ENST00000485550	TMEM238	C9JI98	176 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	LINC00614	P0C842	121 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	PRLH	P81277	87 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	FAM19A1	Q7Z5A9	133 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	BAGE3	Q86Y29	109 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	C18orf32	Q8TCD1	76 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	SND1-IT1	Q9HBX3	110 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	ERG28	Q9UKR5	140 aa		6.18	□□□□□ -1.42
HMGN1-215	ENST00000485550	HBD	P02042	147 aa		6.17	□□□□□ -1.42
HMGN1-215	ENST00000485550	VPREB1	P12018	145 aa		6.17	□□□□□ -1.42
HMGN1-215	ENST00000485550	RHEB	Q15382	184 aa		6.17	□□□□□ -1.42
HMGN1-215	ENST00000485550	C10orf91	Q5T1B1	145 aa		6.17	□□□□□ -1.42
HMGN1-215	ENST00000485550	TMEM170B	Q5T4T1	132 aa		6.17	□□□□□ -1.42
HMGN1-215	ENST00000485550	RETNLB	Q9BQ08	111 aa		6.17	□□□□□ -1.42
HMGN1-215	ENST00000485550	TMEM126A	Q9H061	195 aa		6.17	□□□□□ -1.42
HMGN1-215	ENST00000485550		A0A0U1RRA0	63 aa		6.16	□□□□□ -1.42
HMGN1-215	ENST00000485550	C11orf86	A6NJI1	115 aa		6.16	□□□□□ -1.42
HMGN1-215	ENST00000485550		Q8NDZ9	215 aa		6.16	□□□□□ -1.42
HMGN1-215	ENST00000485550	IGKV2D-26	A0A0A0MRZ7	120 aa		6.15	□□□□□ -1.42
HMGN1-215	ENST00000485550		M0R378	163 aa		6.15	□□□□□ -1.42
HMGN1-215	ENST00000485550	RPL24	P83731	157 aa	Known RBP	6.15	□□□□□ -1.42
HMGN1-215	ENST00000485550	CDIP1	Q9H305	208 aa		6.15	□□□□□ -1.42
HMGN1-215	ENST00000485550	LINC00158	P58513	81 aa		6.14	□□□□□ -1.43
HMGN1-215	ENST00000485550	COX17	Q14061	63 aa		6.14	□□□□□ -1.43
HMGN1-215	ENST00000485550	KRTAP5-3	Q6L8H2	238 aa		6.14	□□□□□ -1.43
HMGN1-215	ENST00000485550	LINC00304	Q8N9R0	145 aa		6.14	□□□□□ -1.43
HMGN1-215	ENST00000485550	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.14	□□□□□ -1.43
HMGN1-215	ENST00000485550	MUC17	Q685J3	4493 aa		6.14	□□□□□ -1.43
HMGN1-215	ENST00000485550	APOC3	P02656	99 aa		6.13	□□□□□ -1.43
HMGN1-215	ENST00000485550	FAM229B	Q4G0N7	80 aa		6.13	□□□□□ -1.43
HMGN1-215	ENST00000485550	CBLN2	Q8IUK8	224 aa		6.12	□□□□□ -1.43
HMGN1-215	ENST00000485550	C3orf22	Q8N5N4	141 aa		6.12	□□□□□ -1.43
HMGN1-215	ENST00000485550	PLEKHB2	Q96CS7	222 aa		6.12	□□□□□ -1.43
HMGN1-215	ENST00000485550	HIGD2A	Q9BW72	106 aa		6.12	□□□□□ -1.43
HMGN1-215	ENST00000485550	FSIP2	Q5CZC0	6907 aa		6.11	□□□□□ -1.43
HMGN1-215	ENST00000485550	TMEM223	A0PJW6	202 aa		6.1	□□□□□ -1.43
HMGN1-215	ENST00000485550	SMIM13	P0DJ93	91 aa		6.1	□□□□□ -1.43
HMGN1-215	ENST00000485550	ATP6V1G1	O75348	118 aa		6.09	□□□□□ -1.43
HMGN1-215	ENST00000485550	SFTA2	Q6UW10	78 aa		6.09	□□□□□ -1.43
HMGN1-215	ENST00000485550	IFI27L1	Q96BM0	104 aa		6.09	□□□□□ -1.43
HMGN1-215	ENST00000485550	IGLV7-46	A0A075B6I9	117 aa		6.08	□□□□□ -1.44
HMGN1-215	ENST00000485550	NCR3	O14931	201 aa		6.08	□□□□□ -1.44
HMGN1-215	ENST00000485550	SNAPIN	O95295	136 aa		6.08	□□□□□ -1.44
HMGN1-215	ENST00000485550	MEIG1	Q5JSS6	88 aa		6.08	□□□□□ -1.44
HMGN1-215	ENST00000485550	BOD1L2	Q8IYS8	172 aa		6.08	□□□□□ -1.44
HMGN1-215	ENST00000485550	TRAV12-1	A0A0B4J245	112 aa		6.07	□□□□□ -1.44
HMGN1-215	ENST00000485550	NDUFA5	Q16718	116 aa		6.07	□□□□□ -1.44
HMGN1-215	ENST00000485550	SVBP	Q8N300	66 aa		6.07	□□□□□ -1.44
HMGN1-215	ENST00000485550	FAM19A2	Q8N3H0	131 aa		6.07	□□□□□ -1.44
HMGN1-215	ENST00000485550	MIR7-3HG	Q8N6C7	128 aa		6.07	□□□□□ -1.44
HMGN1-215	ENST00000485550	CHCHD1	Q96BP2	118 aa	Known RBP	6.07	□□□□□ -1.44
HMGN1-215	ENST00000485550	SPRR4	Q96PI1	79 aa		6.07	□□□□□ -1.44
HMGN1-215	ENST00000485550		H0Y8G0	127 aa		6.06	□□□□□ -1.44
HMGN1-215	ENST00000485550	PPDPF	Q9H3Y8	114 aa		6.06	□□□□□ -1.44
HMGN1-215	ENST00000485550	DAND5	Q8N907	189 aa		6.05	□□□□□ -1.44
HMGN1-215	ENST00000485550	YPEL4	Q96NS1	127 aa		6.05	□□□□□ -1.44
HMGN1-215	ENST00000485550	C9orf118	A6NHY6	69 aa		6.04	□□□□□ -1.44
HMGN1-215	ENST00000485550	HSBP1	O75506	76 aa		6.04	□□□□□ -1.44
HMGN1-215	ENST00000485550	TPRXL	Q17RH7	258 aa		6.04	□□□□□ -1.44
HMGN1-215	ENST00000485550	SMCR5	Q8TEV8	140 aa		6.04	□□□□□ -1.44
HMGN1-215	ENST00000485550	NDUFA12	Q9UI09	145 aa		6.04	□□□□□ -1.44
HMGN1-215	ENST00000485550	ETDC	A0A1B0GVM5	59 aa		6.03	□□□□□ -1.44
HMGN1-215	ENST00000485550	PRY	O14603	147 aa		6.03	□□□□□ -1.44
HMGN1-215	ENST00000485550	LINC01547	P58512	204 aa	Predicted RBP	6.03	□□□□□ -1.44
HMGN1-215	ENST00000485550	HERV-K104	P63124	156 aa		6.03	□□□□□ -1.44
HMGN1-215	ENST00000485550	SPAG11A	Q6PDA7	123 aa		6.03	□□□□□ -1.44
HMGN1-215	ENST00000485550	KCNQ1DN	Q9H478	68 aa		6.03	□□□□□ -1.44
HMGN1-215	ENST00000485550	ZNF706	Q9Y5V0	76 aa	Predicted RBP	6.03	□□□□□ -1.44
HMGN1-215	ENST00000485550	TRBV10-3	A0A0K0K1G6	114 aa		6.02	□□□□□ -1.45
HMGN1-215	ENST00000485550	MYMX	A0A1B0GTQ4	84 aa		6.02	□□□□□ -1.45
HMGN1-215	ENST00000485550	SPRR1A	P35321	89 aa		6.02	□□□□□ -1.45
HMGN1-215	ENST00000485550		Q8NBF4	154 aa		6.02	□□□□□ -1.45
HMGN1-215	ENST00000485550	LINC00587	B1AMM8	73 aa		6.01	□□□□□ -1.45
HMGN1-215	ENST00000485550	TSPEAR-AS2	P59090	65 aa		6.01	□□□□□ -1.45
HMGN1-215	ENST00000485550	CTAG1A	P78358	180 aa		6.01	□□□□□ -1.45
HMGN1-215	ENST00000485550	GAGE2A	Q6NT46	116 aa		6.01	□□□□□ -1.45
HMGN1-215	ENST00000485550	LINC00337	Q8N6G1	96 aa		6.01	□□□□□ -1.45
HMGN1-215	ENST00000485550	MAP1LC3C	Q9BXW4	147 aa		6.01	□□□□□ -1.45
HMGN1-215	ENST00000485550	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6	□□□□□ -1.45
HMGN1-215	ENST00000485550	LEPROTL1	O95214	131 aa		6	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms