RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
SCFD1-206ENST00000484733 BAGE3Q86Y29 109 aa6.63□□□□□ -1.35
SCFD1-206ENST00000484733 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
SCFD1-206ENST00000484733 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
SCFD1-206ENST00000484733 CBLN2Q8IUK8 224 aa6.62□□□□□ -1.35
SCFD1-206ENST00000484733 PMCHL1Q16048 86 aa6.61□□□□□ -1.35
SCFD1-206ENST00000484733 CHTOPQ9Y3Y2 248 aaKnown RBP6.61□□□□□ -1.35
SCFD1-206ENST00000484733 TRAV12-1A0A0B4J245 112 aa6.61□□□□□ -1.35
SCFD1-206ENST00000484733 TMEM223A0PJW6 202 aa6.6□□□□□ -1.35
SCFD1-206ENST00000484733 SPAG11AQ6PDA7 123 aa6.6□□□□□ -1.35
SCFD1-206ENST00000484733 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
SCFD1-206ENST00000484733 LINC00158P58513 81 aa6.6□□□□□ -1.35
SCFD1-206ENST00000484733 IGLV7-46A0A075B6I9 117 aa6.59□□□□□ -1.35
SCFD1-206ENST00000484733 C3orf22Q8N5N4 141 aa6.59□□□□□ -1.35
SCFD1-206ENST00000484733 MUC2Q02817 5179 aa6.59□□□□□ -1.35
SCFD1-206ENST00000484733 CHCHD1Q96BP2 118 aaKnown RBP6.59□□□□□ -1.36
SCFD1-206ENST00000484733 SPRR4Q96PI1 79 aa6.59□□□□□ -1.36
SCFD1-206ENST00000484733 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-206ENST00000484733 PRYO14603 147 aa6.58□□□□□ -1.36
SCFD1-206ENST00000484733 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
SCFD1-206ENST00000484733 SPRR1AP35321 89 aa6.57□□□□□ -1.36
SCFD1-206ENST00000484733 HERV-K104P63124 156 aa6.57□□□□□ -1.36
SCFD1-206ENST00000484733 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-206ENST00000484733 IFI27L1Q96BM0 104 aa6.57□□□□□ -1.36
SCFD1-206ENST00000484733 CDIP1Q9H305 208 aa6.57□□□□□ -1.36
SCFD1-206ENST00000484733 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
SCFD1-206ENST00000484733 LINC00587B1AMM8 73 aa6.56□□□□□ -1.36
SCFD1-206ENST00000484733 SNAPINO95295 136 aa6.56□□□□□ -1.36
SCFD1-206ENST00000484733 KCNQ1DNQ9H478 68 aa6.56□□□□□ -1.36
SCFD1-206ENST00000484733 SMIM13P0DJ93 91 aa6.55□□□□□ -1.36
SCFD1-206ENST00000484733 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-206ENST00000484733 YPEL4Q96NS1 127 aa6.55□□□□□ -1.36
SCFD1-206ENST00000484733 APOC3P02656 99 aa6.55□□□□□ -1.36
SCFD1-206ENST00000484733 SVBPQ8N300 66 aa6.55□□□□□ -1.36
SCFD1-206ENST00000484733 A0A0U1RRA0 63 aa6.54□□□□□ -1.36
SCFD1-206ENST00000484733 KRTAP4-16G5E9R7 235 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-206ENST00000484733 ATP6V1G1O75348 118 aa6.54□□□□□ -1.36
SCFD1-206ENST00000484733 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
SCFD1-206ENST00000484733 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
SCFD1-206ENST00000484733 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
SCFD1-206ENST00000484733 MEIG1Q5JSS6 88 aa6.53□□□□□ -1.36
SCFD1-206ENST00000484733 MIR7-3HGQ8N6C7 128 aa6.53□□□□□ -1.36
SCFD1-206ENST00000484733 SMCR5Q8TEV8 140 aa6.53□□□□□ -1.36
SCFD1-206ENST00000484733 LOC107984156A0A0G2JMH3 177 aa6.53□□□□□ -1.36
SCFD1-206ENST00000484733 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
SCFD1-206ENST00000484733 ARL17AQ8IVW1 177 aa6.53□□□□□ -1.36
SCFD1-206ENST00000484733 FAT4Q6V0I7 4981 aa6.52□□□□□ -1.37
SCFD1-206ENST00000484733 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
SCFD1-206ENST00000484733 LINC00483Q53H64 154 aa6.52□□□□□ -1.37
SCFD1-206ENST00000484733 MAP1LC3CQ9BXW4 147 aa6.52□□□□□ -1.37
SCFD1-206ENST00000484733 NDUFA12Q9UI09 145 aa6.52□□□□□ -1.37
SCFD1-206ENST00000484733 NCR3O14931 201 aa6.51□□□□□ -1.37
SCFD1-206ENST00000484733 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
SCFD1-206ENST00000484733 Q8NBF4 154 aa6.51□□□□□ -1.37
SCFD1-206ENST00000484733 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
SCFD1-206ENST00000484733 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
SCFD1-206ENST00000484733 SPINK1P00995 79 aa6.5□□□□□ -1.37
SCFD1-206ENST00000484733 S100A12P80511 92 aa6.5□□□□□ -1.37
SCFD1-206ENST00000484733 TRBV10-2A0A0K0K1G8 114 aa6.49□□□□□ -1.37
SCFD1-206ENST00000484733 LEPROTO15243 131 aa6.49□□□□□ -1.37
SCFD1-206ENST00000484733 HSBP1O75506 76 aa6.49□□□□□ -1.37
SCFD1-206ENST00000484733 B5MCH6 92 aa6.49□□□□□ -1.37
SCFD1-206ENST00000484733 KRTAP13-3Q3SY46 172 aa6.49□□□□□ -1.37
SCFD1-206ENST00000484733 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
SCFD1-206ENST00000484733 FAM19A2Q8N3H0 131 aa6.48□□□□□ -1.37
SCFD1-206ENST00000484733 DAND5Q8N907 189 aa6.48□□□□□ -1.37
SCFD1-206ENST00000484733 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
SCFD1-206ENST00000484733 DDTP30046 118 aa6.47□□□□□ -1.37
SCFD1-206ENST00000484733 TSPEAR-AS2P59090 65 aa6.47□□□□□ -1.37
SCFD1-206ENST00000484733 PLNP26678 52 aa6.46□□□□□ -1.38
SCFD1-206ENST00000484733 NMUP48645 174 aa6.46□□□□□ -1.38
SCFD1-206ENST00000484733 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.38
SCFD1-206ENST00000484733 LEPROTL1O95214 131 aa6.45□□□□□ -1.38
SCFD1-206ENST00000484733 NDUFC2O95298 119 aa6.45□□□□□ -1.38
SCFD1-206ENST00000484733 ERC2-IT1O76042 136 aa6.45□□□□□ -1.38
SCFD1-206ENST00000484733 GAGE2AQ6NT46 116 aa6.45□□□□□ -1.38
SCFD1-206ENST00000484733 SPANXB1Q9NS25 103 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-206ENST00000484733 J3QQQ9 107 aa6.44□□□□□ -1.38
SCFD1-206ENST00000484733 Q6ZRX8 168 aa6.44□□□□□ -1.38
SCFD1-206ENST00000484733 Q9BRP9 147 aa6.44□□□□□ -1.38
SCFD1-206ENST00000484733 LINC00310P59036 64 aa6.44□□□□□ -1.38
SCFD1-206ENST00000484733 HERVK_113P61574 105 aa6.44□□□□□ -1.38
SCFD1-206ENST00000484733 DPM2O94777 84 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 Q8N377 158 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 HSPB8Q9UJY1 196 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 H0Y8G0 127 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 SERF1AO75920 110 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 TRGC2P03986 189 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 MOBPQ13875 183 aa6.43□□□□□ -1.38
SCFD1-206ENST00000484733 C5orf52A6NGY3 159 aa6.42□□□□□ -1.38
SCFD1-206ENST00000484733 SLC25A20O43772 301 aa6.42□□□□□ -1.38
SCFD1-206ENST00000484733 LGALS3P17931 250 aaKnown RBP6.42□□□□□ -1.38
SCFD1-206ENST00000484733 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
SCFD1-206ENST00000484733 IGKCP01834 107 aa6.41□□□□□ -1.38
SCFD1-206ENST00000484733 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
SCFD1-206ENST00000484733 JOSD1Q15040 202 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-206ENST00000484733 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
SCFD1-206ENST00000484733 S100A7L2Q5SY68 101 aa6.41□□□□□ -1.38
SCFD1-206ENST00000484733 TRAV23DV6A0A075B6W5 121 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms