RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 CTAG1AP78358 180 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 SRSF9Q13242 221 aaKnown RBP eCLIP2.87□□□□□ -1.95
SPTA1-206ENST00000484520 C6orf226Q5I0X4 101 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 C2orf91Q6ZV80 131 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 WFDC10BQ8IUB3 73 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 CEND1Q8N111 149 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 UBE2WQ96B02 151 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 HIST1H4GQ99525 98 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 SPANXDQ9BXN6 97 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 Q9H8V8 135 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 SPANXCQ9NY87 97 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 LINC00588Q9Y4M8 146 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 NACAE9PAV3 2078 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 GVQW2A0A096LPI5 108 aaPredicted RBP2.86□□□□□ -1.95
SPTA1-206ENST00000484520 IGHV3-30P01768 117 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 IGHV3-33P01772 117 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 IGHV3-30-5P0DP03 117 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 KRTAP10-8P60410 259 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 COX6A2Q02221 97 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 UBE2V1Q13404 147 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 MEIG1Q5JSS6 88 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 BVES-AS1Q5T3Y7 98 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 LYRM7Q5U5X0 104 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 ENHOQ6UWT2 76 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 ORAOV1Q8WV07 137 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 ZNF625Q96I27 306 aaPredicted RBP2.86□□□□□ -1.95
SPTA1-206ENST00000484520 C2orf48Q96LS8 159 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 APLNQ9ULZ1 77 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 CBY1Q9Y3M2 126 aa2.86□□□□□ -1.95
SPTA1-206ENST00000484520 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
SPTA1-206ENST00000484520 IGKV2D-24A0A075B6R9 120 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 TRBV30A0A0K0K1B3 111 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 TSPEAR-AS2P59090 65 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 SPAG11BQ08648 103 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 CLPSL2Q6UWE3 100 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 C5orf38Q86SI9 138 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 MAPKAPK5-AS1Q8N8E1 139 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 TOMM7Q9P0U1 55 aa2.85□□□□□ -1.95
SPTA1-206ENST00000484520 IGLV10-54A0A075B6I4 117 aa2.84□□□□□ -1.95
SPTA1-206ENST00000484520 A0A0B4J2C4 111 aa2.84□□□□□ -1.95
SPTA1-206ENST00000484520 A0A1B0GWB2 263 aa2.84□□□□□ -1.95
SPTA1-206ENST00000484520 SMIM13P0DJ93 91 aa2.84□□□□□ -1.95
SPTA1-206ENST00000484520 HINT1P49773 126 aaPredicted RBP2.84□□□□□ -1.95
SPTA1-206ENST00000484520 BATFQ16520 125 aa2.84□□□□□ -1.95
SPTA1-206ENST00000484520 SNHG12Q9BXW3 62 aa2.84□□□□□ -1.95
SPTA1-206ENST00000484520 ERG28Q9UKR5 140 aa2.84□□□□□ -1.95
SPTA1-206ENST00000484520 TRAV13-2A0A0B4J235 113 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 LOC107984156A0A0G2JMH3 177 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 NBDYA0A0U1RRE5 68 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 PSCAO43653 123 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 NDUFC2O95298 119 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 LINC00158P58513 81 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 DSCR10P59022 87 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 KIAA0087Q14695 138 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 CASC10Q5T4H9 136 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 ARL17AQ8IVW1 177 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 RAB37Q96AX2 223 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 TTTY13Q9BZ97 58 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 TENM3Q9P273 2699 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 DNAH7Q8WXX0 4024 aa2.83□□□□□ -1.96
SPTA1-206ENST00000484520 COL7A1Q02388 2944 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 COX6CP09669 75 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 TLX1NBP0CAT3 122 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 CNBPP62633 177 aaKnown RBP2.82□□□□□ -1.96
SPTA1-206ENST00000484520 KRTAP26-1Q6PEX3 210 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 LINC00308Q8TCZ7 52 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 CARD19Q96LW7 228 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 Q9HAA7 133 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 NHP2Q9NX24 153 aaKnown RBP2.82□□□□□ -1.96
SPTA1-206ENST00000484520 PRO1854Q9UHT4 67 aa2.82□□□□□ -1.96
SPTA1-206ENST00000484520 RYR2Q92736 4967 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 TRBV10-2A0A0K0K1G8 114 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 LCE6AA0A183 80 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 NDUFC2-KCTD14E9PQ53 114 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 SNCGO76070 127 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 FABP2P12104 132 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 FXYD2P54710 66 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 GTF2H5Q6ZYL4 71 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 Q75L30 129 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 MUSTN1Q8IVN3 82 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 C15orf56Q8N910 161 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 SND1-IT1Q9HBX3 110 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 LINC00474Q9P2X8 69 aa2.81□□□□□ -1.96
SPTA1-206ENST00000484520 STAB2Q8WWQ8 2551 aa2.8□□□□□ -1.96
SPTA1-206ENST00000484520 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
SPTA1-206ENST00000484520 KRTAP16-1A8MUX0 517 aa2.8□□□□□ -1.96
SPTA1-206ENST00000484520 PFN2P35080 140 aa2.8□□□□□ -1.96
SPTA1-206ENST00000484520 Q1RN00 199 aa2.8□□□□□ -1.96
SPTA1-206ENST00000484520 ADAMTSL4-AS1Q5T5F5 129 aa2.8□□□□□ -1.96
SPTA1-206ENST00000484520 C6orf223Q8N319 242 aa2.8□□□□□ -1.96
SPTA1-206ENST00000484520 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
SPTA1-206ENST00000484520 LOC107984640A0A0U1RRK4 108 aa2.79□□□□□ -1.96
SPTA1-206ENST00000484520 A0A1W2PPM0 123 aa2.79□□□□□ -1.96
SPTA1-206ENST00000484520 TAX1BP3O14907 124 aa2.79□□□□□ -1.96
SPTA1-206ENST00000484520 VAMP3Q15836 100 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms