RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 M0QXV9 152 aa16.41■□□□□ 0.22
GTF3C4-202ENST00000483873 KRTAP11-1Q8IUC1 163 aa16.39■□□□□ 0.21
GTF3C4-202ENST00000483873 ERG28Q9UKR5 140 aa16.39■□□□□ 0.21
GTF3C4-202ENST00000483873 MYMXA0A1B0GTQ4 84 aa16.38■□□□□ 0.21
GTF3C4-202ENST00000483873 PFN2P35080 140 aa16.38■□□□□ 0.21
GTF3C4-202ENST00000483873 JOSD1Q15040 202 aaPredicted RBP16.38■□□□□ 0.21
GTF3C4-202ENST00000483873 PSORS1C2Q9UIG4 136 aa16.38■□□□□ 0.21
GTF3C4-202ENST00000483873 NMUP48645 174 aa16.37■□□□□ 0.21
GTF3C4-202ENST00000483873 HERV-K104P63124 156 aa16.36■□□□□ 0.21
GTF3C4-202ENST00000483873 TTTY13Q9BZ97 58 aa16.36■□□□□ 0.21
GTF3C4-202ENST00000483873 KRTAP29-1A8MX34 341 aaPredicted RBP16.34■□□□□ 0.21
GTF3C4-202ENST00000483873 PYY3Q5JQD4 70 aa16.33■□□□□ 0.2
GTF3C4-202ENST00000483873 MEIG1Q5JSS6 88 aa16.33■□□□□ 0.2
GTF3C4-202ENST00000483873 C22orf24Q9Y442 160 aa16.33■□□□□ 0.2
GTF3C4-202ENST00000483873 A0A0U1RRA0 63 aa16.32■□□□□ 0.2
GTF3C4-202ENST00000483873 HSBP1L1C9JCN9 74 aa16.32■□□□□ 0.2
GTF3C4-202ENST00000483873 COX17Q14061 63 aa16.32■□□□□ 0.2
GTF3C4-202ENST00000483873 SMIM13P0DJ93 91 aa16.31■□□□□ 0.2
GTF3C4-202ENST00000483873 ZNF815PA8K554 130 aa16.3■□□□□ 0.2
GTF3C4-202ENST00000483873 UBE2BP63146 152 aa16.3■□□□□ 0.2
GTF3C4-202ENST00000483873 C1orf137Q5JT78 98 aa16.3■□□□□ 0.2
GTF3C4-202ENST00000483873 LINC00158P58513 81 aa16.29■□□□□ 0.2
GTF3C4-202ENST00000483873 PCP2Q8IVA1 136 aa16.29■□□□□ 0.2
GTF3C4-202ENST00000483873 A0A0J9YXY3 114 aa16.28■□□□□ 0.2
GTF3C4-202ENST00000483873 J3QL48 77 aa16.28■□□□□ 0.2
GTF3C4-202ENST00000483873 SND1-IT1Q9HBX3 110 aa16.28■□□□□ 0.2
GTF3C4-202ENST00000483873 PLA2G2DQ9UNK4 145 aa16.28■□□□□ 0.2
GTF3C4-202ENST00000483873 OXTP01178 125 aa16.27■□□□□ 0.19
GTF3C4-202ENST00000483873 SRSF9Q13242 221 aaKnown RBP eCLIP16.27■□□□□ 0.19
GTF3C4-202ENST00000483873 LINC00587B1AMM8 73 aa16.25■□□□□ 0.19
GTF3C4-202ENST00000483873 MRPL55Q7Z7F7 128 aaKnown RBP16.25■□□□□ 0.19
GTF3C4-202ENST00000483873 TP73-AS1Q9UF72 201 aa16.25■□□□□ 0.19
GTF3C4-202ENST00000483873 SPINK6Q6UWN8 80 aa16.24■□□□□ 0.19
GTF3C4-202ENST00000483873 MIR7-3HGQ8N6C7 128 aa16.24■□□□□ 0.19
GTF3C4-202ENST00000483873 LBHQ53QV2 105 aaPredicted RBP16.22■□□□□ 0.19
GTF3C4-202ENST00000483873 DAND5Q8N907 189 aa16.22■□□□□ 0.19
GTF3C4-202ENST00000483873 VAMP8Q9BV40 100 aa16.22■□□□□ 0.19
GTF3C4-202ENST00000483873 PAM16Q9Y3D7 125 aa16.22■□□□□ 0.19
GTF3C4-202ENST00000483873 IGLV5-37A0A075B6J1 123 aa16.21■□□□□ 0.19
GTF3C4-202ENST00000483873 IGLV7-43P04211 117 aa16.21■□□□□ 0.19
GTF3C4-202ENST00000483873 Q8NDZ9 215 aa16.2■□□□□ 0.18
GTF3C4-202ENST00000483873 LINC00167Q96N53 147 aa16.2■□□□□ 0.18
GTF3C4-202ENST00000483873 GAGE10A6NGK3 116 aa16.19■□□□□ 0.18
GTF3C4-202ENST00000483873 SPATA45Q537H7 98 aa16.19■□□□□ 0.18
GTF3C4-202ENST00000483873 ADAMTSL4-AS1Q5T5F5 129 aa16.19■□□□□ 0.18
GTF3C4-202ENST00000483873 LITAFQ99732 161 aa16.19■□□□□ 0.18
GTF3C4-202ENST00000483873 VPREB1P12018 145 aa16.19■□□□□ 0.18
GTF3C4-202ENST00000483873 NKAPP1Q8N9T2 125 aa16.19■□□□□ 0.18
GTF3C4-202ENST00000483873 RPL37AP8A6NKH3 93 aa16.17■□□□□ 0.18
GTF3C4-202ENST00000483873 SCGB1D4Q6XE38 83 aa16.17■□□□□ 0.18
GTF3C4-202ENST00000483873 LOC105371267A0A1B0GV96 52 aa16.16■□□□□ 0.18
GTF3C4-202ENST00000483873 TIMM17BO60830 172 aa16.16■□□□□ 0.18
GTF3C4-202ENST00000483873 COX8AP10176 69 aa16.14■□□□□ 0.17
GTF3C4-202ENST00000483873 MT1HL1P0DM35 61 aa16.13■□□□□ 0.17
GTF3C4-202ENST00000483873 BOD1L2Q8IYS8 172 aa16.13■□□□□ 0.17
GTF3C4-202ENST00000483873 NPC2P61916 151 aa16.11■□□□□ 0.17
GTF3C4-202ENST00000483873 RPL24P83731 157 aaKnown RBP16.11■□□□□ 0.17
GTF3C4-202ENST00000483873 C14orf144Q96I85 54 aa16.11■□□□□ 0.17
GTF3C4-202ENST00000483873 TNXBP22105 4242 aa16.11■□□□□ 0.17
GTF3C4-202ENST00000483873 REG3GQ6UW15 175 aa16.11■□□□□ 0.17
GTF3C4-202ENST00000483873 SOSTDC1Q6X4U4 206 aa16.11■□□□□ 0.17
GTF3C4-202ENST00000483873 LOC107984156A0A0G2JMH3 177 aa16.1■□□□□ 0.17
GTF3C4-202ENST00000483873 EIF4EBP3O60516 100 aaPredicted RBP16.1■□□□□ 0.17
GTF3C4-202ENST00000483873 ARL17AQ8IVW1 177 aa16.1■□□□□ 0.17
GTF3C4-202ENST00000483873 IGKV2-28A0A075B6P5 120 aa16.09■□□□□ 0.17
GTF3C4-202ENST00000483873 TMEM238C9JI98 176 aa16.09■□□□□ 0.17
GTF3C4-202ENST00000483873 IGKV2D-28P01615 120 aa16.09■□□□□ 0.17
GTF3C4-202ENST00000483873 LINC01600Q96MT4 127 aa16.08■□□□□ 0.16
GTF3C4-202ENST00000483873 DLEU1O43261 78 aa16.07■□□□□ 0.16
GTF3C4-202ENST00000483873 DIRC1Q969H9 104 aa16.07■□□□□ 0.16
GTF3C4-202ENST00000483873 SPANXDQ9BXN6 97 aa16.07■□□□□ 0.16
GTF3C4-202ENST00000483873 SPANXCQ9NY87 97 aa16.07■□□□□ 0.16
GTF3C4-202ENST00000483873 LINC00308Q8TCZ7 52 aa16.06■□□□□ 0.16
GTF3C4-202ENST00000483873 MIEN1Q9BRT3 115 aa16.06■□□□□ 0.16
GTF3C4-202ENST00000483873 H0Y9J4 135 aa16.05■□□□□ 0.16
GTF3C4-202ENST00000483873 IGLV1-50A0A075B6I6 118 aa16.04■□□□□ 0.16
GTF3C4-202ENST00000483873 BCE1O60756 84 aa16.04■□□□□ 0.16
GTF3C4-202ENST00000483873 ZNF861PO60384 105 aa16.03■□□□□ 0.16
GTF3C4-202ENST00000483873 SMIM6P0DI80 62 aa16.02■□□□□ 0.16
GTF3C4-202ENST00000483873 S100A12P80511 92 aa16.02■□□□□ 0.16
GTF3C4-202ENST00000483873 SLC25A34Q6PIV7 304 aa16.02■□□□□ 0.16
GTF3C4-202ENST00000483873 SPANXB1Q9NS25 103 aaPredicted RBP16.01■□□□□ 0.15
GTF3C4-202ENST00000483873 NCR3O14931 201 aa16■□□□□ 0.15
GTF3C4-202ENST00000483873 M0R378 163 aa15.99■□□□□ 0.15
GTF3C4-202ENST00000483873 Q6ZVH6 145 aa15.99■□□□□ 0.15
GTF3C4-202ENST00000483873 NDUFC2O95298 119 aa15.97■□□□□ 0.15
GTF3C4-202ENST00000483873 C2orf91Q6ZV80 131 aa15.97■□□□□ 0.15
GTF3C4-202ENST00000483873 MUSTN1Q8IVN3 82 aa15.97■□□□□ 0.15
GTF3C4-202ENST00000483873 IFITM1P13164 125 aa15.96■□□□□ 0.15
GTF3C4-202ENST00000483873 TMEM126AQ9H061 195 aa15.96■□□□□ 0.15
GTF3C4-202ENST00000483873 RPL28P46779 137 aaKnown RBP15.95■□□□□ 0.14
GTF3C4-202ENST00000483873 KRTAP10-8P60410 259 aa15.95■□□□□ 0.14
GTF3C4-202ENST00000483873 KRTAP1-4P0C5Y4 121 aa15.94■□□□□ 0.14
GTF3C4-202ENST00000483873 KRTAP13-1Q8IUC0 172 aa15.94■□□□□ 0.14
GTF3C4-202ENST00000483873 HIGD1BQ9P298 99 aa15.94■□□□□ 0.14
GTF3C4-202ENST00000483873 UBE2AP49459 152 aa15.93■□□□□ 0.14
GTF3C4-202ENST00000483873 PPDPFQ9H3Y8 114 aa15.93■□□□□ 0.14
GTF3C4-202ENST00000483873 COPS9Q8WXC6 57 aa15.92■□□□□ 0.14
GTF3C4-202ENST00000483873 TRBV10-2A0A0K0K1G8 114 aa15.91■□□□□ 0.14
GTF3C4-202ENST00000483873 PRLHP81277 87 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms