RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
HDAC6-226ENST00000483656 Q6ZRP5 223 aa6.54□□□□□ -1.36
HDAC6-226ENST00000483656 COPS9Q8WXC6 57 aa6.54□□□□□ -1.36
HDAC6-226ENST00000483656 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
HDAC6-226ENST00000483656 IGKV2-28A0A075B6P5 120 aa6.53□□□□□ -1.36
HDAC6-226ENST00000483656 A0A087WTM6 91 aa6.53□□□□□ -1.36
HDAC6-226ENST00000483656 A0A1B0GV90 55 aa6.53□□□□□ -1.36
HDAC6-226ENST00000483656 IGKV2D-28P01615 120 aa6.53□□□□□ -1.36
HDAC6-226ENST00000483656 TLX1NBP0CAT3 122 aa6.53□□□□□ -1.36
HDAC6-226ENST00000483656 C14orf177Q52M58 125 aa6.53□□□□□ -1.36
HDAC6-226ENST00000483656 NAA38Q9BRA0 125 aaKnown RBP6.53□□□□□ -1.36
HDAC6-226ENST00000483656 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-226ENST00000483656 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
HDAC6-226ENST00000483656 PRR3P79522 188 aaKnown RBP6.52□□□□□ -1.37
HDAC6-226ENST00000483656 Q8N814 137 aa6.52□□□□□ -1.37
HDAC6-226ENST00000483656 XAGE1AQ9HD64 81 aa6.52□□□□□ -1.37
HDAC6-226ENST00000483656 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
HDAC6-226ENST00000483656 RTL8CO15255 209 aa6.51□□□□□ -1.37
HDAC6-226ENST00000483656 NDUFC2O95298 119 aa6.51□□□□□ -1.37
HDAC6-226ENST00000483656 TSPAN13O95857 204 aa6.51□□□□□ -1.37
HDAC6-226ENST00000483656 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
HDAC6-226ENST00000483656 LINC00337Q8N6G1 96 aa6.51□□□□□ -1.37
HDAC6-226ENST00000483656 RYR2Q92736 4967 aa6.5□□□□□ -1.37
HDAC6-226ENST00000483656 LCE6AA0A183 80 aa6.5□□□□□ -1.37
HDAC6-226ENST00000483656 H3BUT2 72 aa6.5□□□□□ -1.37
HDAC6-226ENST00000483656 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
HDAC6-226ENST00000483656 PGPEP1Q9NXJ5 209 aa6.5□□□□□ -1.37
HDAC6-226ENST00000483656 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
HDAC6-226ENST00000483656 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
HDAC6-226ENST00000483656 LOC107984640A0A0U1RRK4 108 aa6.49□□□□□ -1.37
HDAC6-226ENST00000483656 RPL13AP40429 203 aaKnown RBP6.49□□□□□ -1.37
HDAC6-226ENST00000483656 RPL18AQ02543 176 aaKnown RBP6.49□□□□□ -1.37
HDAC6-226ENST00000483656 TNP2Q05952 138 aa6.49□□□□□ -1.37
HDAC6-226ENST00000483656 PKD1P98161 4303 aa6.49□□□□□ -1.37
HDAC6-226ENST00000483656 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
HDAC6-226ENST00000483656 H7C2G1 150 aa6.48□□□□□ -1.37
HDAC6-226ENST00000483656 VPREB1P12018 145 aa6.48□□□□□ -1.37
HDAC6-226ENST00000483656 C9orf163Q8N9P6 203 aa6.48□□□□□ -1.37
HDAC6-226ENST00000483656 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
HDAC6-226ENST00000483656 A0A1W2PPM0 123 aa6.47□□□□□ -1.37
HDAC6-226ENST00000483656 NCR3O14931 201 aa6.47□□□□□ -1.37
HDAC6-226ENST00000483656 FUSP35637 526 aaKnown RBP eCLIP6.47□□□□□ -1.37
HDAC6-226ENST00000483656 GAGE2BQ13066 116 aa6.47□□□□□ -1.37
HDAC6-226ENST00000483656 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
HDAC6-226ENST00000483656 A0A096LNI7 61 aa6.46□□□□□ -1.38
HDAC6-226ENST00000483656 LINC01620Q4KN68 170 aa6.46□□□□□ -1.38
HDAC6-226ENST00000483656 SERTAD4-AS1Q5TG53 156 aa6.46□□□□□ -1.38
HDAC6-226ENST00000483656 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
HDAC6-226ENST00000483656 PLA2G2DQ9UNK4 145 aa6.46□□□□□ -1.38
HDAC6-226ENST00000483656 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
HDAC6-226ENST00000483656 TRBV10-2A0A0K0K1G8 114 aa6.45□□□□□ -1.38
HDAC6-226ENST00000483656 FAM168BA1KXE4 195 aa6.45□□□□□ -1.38
HDAC6-226ENST00000483656 C16orf90A8MZG2 172 aa6.44□□□□□ -1.38
HDAC6-226ENST00000483656 TRIAP1O43715 76 aa6.44□□□□□ -1.38
HDAC6-226ENST00000483656 Q1RN00 199 aa6.44□□□□□ -1.38
HDAC6-226ENST00000483656 OR13C6PQ8NH95 151 aa6.44□□□□□ -1.38
HDAC6-226ENST00000483656 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
HDAC6-226ENST00000483656 M0R378 163 aa6.43□□□□□ -1.38
HDAC6-226ENST00000483656 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
HDAC6-226ENST00000483656 CHTF8P0CG12 524 aa6.43□□□□□ -1.38
HDAC6-226ENST00000483656 FABP2P12104 132 aa6.43□□□□□ -1.38
HDAC6-226ENST00000483656 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
HDAC6-226ENST00000483656 VAMP3Q15836 100 aa6.43□□□□□ -1.38
HDAC6-226ENST00000483656 SMIM11BQ8TCY0 68 aa6.43□□□□□ -1.38
HDAC6-226ENST00000483656 IGKV2-24A0A0C4DH68 120 aa6.42□□□□□ -1.38
HDAC6-226ENST00000483656 A0A1W2PNN7 141 aa6.42□□□□□ -1.38
HDAC6-226ENST00000483656 PANO1I0J062 215 aa6.42□□□□□ -1.38
HDAC6-226ENST00000483656 PSMB2P49721 201 aa6.42□□□□□ -1.38
HDAC6-226ENST00000483656 TMEM126AQ9H061 195 aa6.42□□□□□ -1.38
HDAC6-226ENST00000483656 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
HDAC6-226ENST00000483656 K7EP34 96 aa6.41□□□□□ -1.38
HDAC6-226ENST00000483656 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
HDAC6-226ENST00000483656 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
HDAC6-226ENST00000483656 SPCS1Q9Y6A9 102 aa6.41□□□□□ -1.38
HDAC6-226ENST00000483656 IGLV5-52A0A0A0MRZ9 124 aa6.4□□□□□ -1.38
HDAC6-226ENST00000483656 TCL1BO95988 128 aa6.4□□□□□ -1.38
HDAC6-226ENST00000483656 S100A7L2Q5SY68 101 aa6.4□□□□□ -1.38
HDAC6-226ENST00000483656 FAM19A5Q7Z5A7 132 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-226ENST00000483656 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
HDAC6-226ENST00000483656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-226ENST00000483656 RYR1P21817 5038 aa6.4□□□□□ -1.39
HDAC6-226ENST00000483656 GAGE10A6NGK3 116 aa6.39□□□□□ -1.39
HDAC6-226ENST00000483656 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
HDAC6-226ENST00000483656 UBE2V1Q13404 147 aa6.39□□□□□ -1.39
HDAC6-226ENST00000483656 NKAPP1Q8N9T2 125 aa6.39□□□□□ -1.39
HDAC6-226ENST00000483656 PKIGQ9Y2B9 76 aa6.39□□□□□ -1.39
HDAC6-226ENST00000483656 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
HDAC6-226ENST00000483656 EPM2AB3EWF7 344 aa6.38□□□□□ -1.39
HDAC6-226ENST00000483656 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
HDAC6-226ENST00000483656 CLEC2BQ92478 149 aa6.38□□□□□ -1.39
HDAC6-226ENST00000483656 LINC00167Q96N53 147 aa6.38□□□□□ -1.39
HDAC6-226ENST00000483656 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
HDAC6-226ENST00000483656 IGLV1-50A0A075B6I6 118 aa6.36□□□□□ -1.39
HDAC6-226ENST00000483656 TRAV23DV6A0A075B6W5 121 aa6.36□□□□□ -1.39
HDAC6-226ENST00000483656 H3BMG7 143 aa6.36□□□□□ -1.39
HDAC6-226ENST00000483656 COX6CP09669 75 aa6.36□□□□□ -1.39
HDAC6-226ENST00000483656 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
HDAC6-226ENST00000483656 LYRM7Q5U5X0 104 aa6.36□□□□□ -1.39
HDAC6-226ENST00000483656 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
HDAC6-226ENST00000483656 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 420.8 ms