RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
CPNE1-225ENST00000483495 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
CPNE1-225ENST00000483495 SIGMAR1Q99720 223 aa8.76□□□□□ -1.01
CPNE1-225ENST00000483495 Q9HAA7 133 aa8.76□□□□□ -1.01
CPNE1-225ENST00000483495 COL7A1Q02388 2944 aa8.76□□□□□ -1.01
CPNE1-225ENST00000483495 H0YGX0 51 aa8.75□□□□□ -1.01
CPNE1-225ENST00000483495 PRR3P79522 188 aaKnown RBP8.75□□□□□ -1.01
CPNE1-225ENST00000483495 Q6ZRU5 148 aa8.75□□□□□ -1.01
CPNE1-225ENST00000483495 FAM218AQ96MZ4 157 aa8.75□□□□□ -1.01
CPNE1-225ENST00000483495 TMEM126AQ9H061 195 aa8.74□□□□□ -1.01
CPNE1-225ENST00000483495 APLNQ9ULZ1 77 aa8.74□□□□□ -1.01
CPNE1-225ENST00000483495 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
CPNE1-225ENST00000483495 RMI2Q96E14 147 aa8.74□□□□□ -1.01
CPNE1-225ENST00000483495 DYNC2H1Q8NCM8 4307 aaKnown RBP8.72□□□□□ -1.01
CPNE1-225ENST00000483495 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
CPNE1-225ENST00000483495 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.01
CPNE1-225ENST00000483495 NCR3O14931 201 aa8.71□□□□□ -1.01
CPNE1-225ENST00000483495 SYCNQ0VAF6 134 aa8.71□□□□□ -1.01
CPNE1-225ENST00000483495 IGLV6-57P01721 117 aa8.7□□□□□ -1.02
CPNE1-225ENST00000483495 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
CPNE1-225ENST00000483495 A0A087WYN8 130 aa8.69□□□□□ -1.02
CPNE1-225ENST00000483495 USP17L23D6RBM5 183 aa8.69□□□□□ -1.02
CPNE1-225ENST00000483495 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
CPNE1-225ENST00000483495 TEX49A0A1B0GTD5 131 aa8.68□□□□□ -1.02
CPNE1-225ENST00000483495 SCGB1A1P11684 91 aa8.68□□□□□ -1.02
CPNE1-225ENST00000483495 S100A7L2Q5SY68 101 aa8.68□□□□□ -1.02
CPNE1-225ENST00000483495 NUPR2A6NF83 97 aa8.68□□□□□ -1.02
CPNE1-225ENST00000483495 A0A1B0GX51 115 aa8.67□□□□□ -1.02
CPNE1-225ENST00000483495 BAALC-AS2P0C853 105 aa8.67□□□□□ -1.02
CPNE1-225ENST00000483495 TLX1NBP0CAT3 122 aa8.67□□□□□ -1.02
CPNE1-225ENST00000483495 VPREB1P12018 145 aa8.67□□□□□ -1.02
CPNE1-225ENST00000483495 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
CPNE1-225ENST00000483495 Q6ZRP5 223 aa8.67□□□□□ -1.02
CPNE1-225ENST00000483495 KRTAP1-5Q9BYS1 174 aa8.67□□□□□ -1.02
CPNE1-225ENST00000483495 CDIP1Q9H305 208 aa8.67□□□□□ -1.02
CPNE1-225ENST00000483495 SLPIP03973 132 aa8.66□□□□□ -1.02
CPNE1-225ENST00000483495 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
CPNE1-225ENST00000483495 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
CPNE1-225ENST00000483495 LECT2O14960 151 aa8.65□□□□□ -1.02
CPNE1-225ENST00000483495 DNAL4O96015 105 aa8.65□□□□□ -1.02
CPNE1-225ENST00000483495 C6orf99Q4VX62 202 aa8.65□□□□□ -1.02
CPNE1-225ENST00000483495 DNHD1Q96M86 4753 aa8.65□□□□□ -1.03
CPNE1-225ENST00000483495 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
CPNE1-225ENST00000483495 C21orf62-AS1Q17RA5 79 aa8.64□□□□□ -1.03
CPNE1-225ENST00000483495 GAGE2EQ4V326 116 aa8.64□□□□□ -1.03
CPNE1-225ENST00000483495 GAGE2DQ9UEU5 116 aa8.64□□□□□ -1.03
CPNE1-225ENST00000483495 TRBV10-3A0A0K0K1G6 114 aa8.63□□□□□ -1.03
CPNE1-225ENST00000483495 M0R378 163 aa8.63□□□□□ -1.03
CPNE1-225ENST00000483495 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
CPNE1-225ENST00000483495 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
CPNE1-225ENST00000483495 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
CPNE1-225ENST00000483495 Q8N814 137 aa8.62□□□□□ -1.03
CPNE1-225ENST00000483495 PRKDCP78527 4128 aaKnown RBP8.61□□□□□ -1.03
CPNE1-225ENST00000483495 CSMD3Q7Z407 3707 aa8.61□□□□□ -1.03
CPNE1-225ENST00000483495 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
CPNE1-225ENST00000483495 SNCGO76070 127 aa8.6□□□□□ -1.03
CPNE1-225ENST00000483495 LINC00575Q6W349 94 aa8.6□□□□□ -1.03
CPNE1-225ENST00000483495 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
CPNE1-225ENST00000483495 DNAH7Q8WXX0 4024 aa8.6□□□□□ -1.03
CPNE1-225ENST00000483495 ACYP1P07311 99 aa8.6□□□□□ -1.03
CPNE1-225ENST00000483495 LYSTQ99698 3801 aa8.6□□□□□ -1.03
CPNE1-225ENST00000483495 MEGF8Q7Z7M0 2845 aa8.59□□□□□ -1.03
CPNE1-225ENST00000483495 TRBV7-6A0A0J9YX20 115 aa8.59□□□□□ -1.03
CPNE1-225ENST00000483495 INAFM2P0DMQ5 153 aa8.59□□□□□ -1.03
CPNE1-225ENST00000483495 XGP55808 180 aa8.59□□□□□ -1.03
CPNE1-225ENST00000483495 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
CPNE1-225ENST00000483495 ZNF73O43830 326 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-225ENST00000483495 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
CPNE1-225ENST00000483495 PLECQ15149 4684 aaKnown RBP8.58□□□□□ -1.04
CPNE1-225ENST00000483495 TTC32Q5I0X7 151 aa8.57□□□□□ -1.04
CPNE1-225ENST00000483495 OBSCN-AS1Q96MR7 158 aa8.57□□□□□ -1.04
CPNE1-225ENST00000483495 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
CPNE1-225ENST00000483495 MT-ATP8P03928 68 aa8.57□□□□□ -1.04
CPNE1-225ENST00000483495 NBDYA0A0U1RRE5 68 aa8.56□□□□□ -1.04
CPNE1-225ENST00000483495 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
CPNE1-225ENST00000483495 SERTAD4-AS1Q5TG53 156 aa8.56□□□□□ -1.04
CPNE1-225ENST00000483495 LOC107984640A0A0U1RRK4 108 aa8.55□□□□□ -1.04
CPNE1-225ENST00000483495 hADV29S1A0JD25 119 aa8.55□□□□□ -1.04
CPNE1-225ENST00000483495 PSCAO43653 123 aa8.55□□□□□ -1.04
CPNE1-225ENST00000483495 ELOF1P60002 83 aaKnown RBP8.55□□□□□ -1.04
CPNE1-225ENST00000483495 TMEM256-PLSCR3K7ERE1 68 aa8.54□□□□□ -1.04
CPNE1-225ENST00000483495 C14orf177Q52M58 125 aa8.54□□□□□ -1.04
CPNE1-225ENST00000483495 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
CPNE1-225ENST00000483495 COX7BP24311 80 aa8.53□□□□□ -1.04
CPNE1-225ENST00000483495 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
CPNE1-225ENST00000483495 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
CPNE1-225ENST00000483495 STARD9Q9P2P6 4700 aa8.53□□□□□ -1.04
CPNE1-225ENST00000483495 GAGE2BQ13066 116 aa8.52□□□□□ -1.05
CPNE1-225ENST00000483495 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.05
CPNE1-225ENST00000483495 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
CPNE1-225ENST00000483495 DNAH10Q8IVF4 4471 aa8.51□□□□□ -1.05
CPNE1-225ENST00000483495 FAM168BA1KXE4 195 aa8.51□□□□□ -1.05
CPNE1-225ENST00000483495 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
CPNE1-225ENST00000483495 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
CPNE1-225ENST00000483495 H3BQ85 93 aa8.5□□□□□ -1.05
CPNE1-225ENST00000483495 Q6Q795 121 aa8.49□□□□□ -1.05
CPNE1-225ENST00000483495 VPS13DQ5THJ4 4388 aa8.49□□□□□ -1.05
CPNE1-225ENST00000483495 TENM2Q9NT68 2774 aa8.49□□□□□ -1.05
CPNE1-225ENST00000483495 C16orf90A8MZG2 172 aa8.49□□□□□ -1.05
CPNE1-225ENST00000483495 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms