RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 APOC3P02656 99 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 MT-ND4LP03901 98 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
UPF3A-207ENST00000481131 HBBP68871 147 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 LINC01556Q5JQF7 62 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 C1orf134Q5TEV5 83 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 CLPSL2Q6UWE3 100 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 Q6ZRN7 208 aaPredicted RBP2.38□□□□□ -2.03
UPF3A-207ENST00000481131 SMIM15Q7Z3B0 74 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 NIT1Q86X76 327 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 NIT2Q9NQR4 276 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 TMEM242Q9NWH2 141 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 WFDC2Q14508 124 aa2.37□□□□□ -2.03
UPF3A-207ENST00000481131 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
UPF3A-207ENST00000481131 SCXQ7RTU7 201 aa2.37□□□□□ -2.03
UPF3A-207ENST00000481131 IMMP2LQ96T52 175 aa2.37□□□□□ -2.03
UPF3A-207ENST00000481131 TMEM70Q9BUB7 260 aa2.37□□□□□ -2.03
UPF3A-207ENST00000481131 ST20Q9HBF5 79 aa2.37□□□□□ -2.03
UPF3A-207ENST00000481131 TRBV25-1A0A075B6N4 114 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 A0A087WWC5 75 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 A0A087WX48 190 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 TGIF2-C20orf24A0A0A6YYL0 155 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 IGHV1-24A0A0C4DH33 117 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 TRBV6-5A0A0K0K1A5 114 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 IBA57-AS1B1ANH7 110 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 TMEM262E9PQX1 116 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 ANGP03950 147 aaKnown RBP2.36□□□□□ -2.03
UPF3A-207ENST00000481131 CKS2P33552 79 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 POLR2KP53803 58 aaKnown RBP2.36□□□□□ -2.03
UPF3A-207ENST00000481131 RPL39P62891 51 aaKnown RBP2.36□□□□□ -2.03
UPF3A-207ENST00000481131 COTL1Q14019 142 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 RHEBQ15382 184 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 IQCJQ1A5X6 159 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 ENHOQ6UWT2 76 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 ATP5L2Q7Z4Y8 100 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 BTF3L4Q96K17 158 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 PRELID3AQ96N28 172 aa2.36□□□□□ -2.03
UPF3A-207ENST00000481131 IGKV3OR2-268A0A0C4DH90 116 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 TRBV27A0A0K0K1C4 114 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 I3L3M4 83 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 UBE2L6O14933 153 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 S100A8P05109 93 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 ESDP10768 282 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 S100PP25815 95 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 ELOBQ15370 118 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 NDUFA5Q16718 116 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 LINC00269Q8N2A0 174 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 SVBPQ8N300 66 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 C10orf126Q8N4M7 172 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.35□□□□□ -2.03
UPF3A-207ENST00000481131 SMIM2Q9BVW6 85 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 HIGD2AQ9BW72 106 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 BIRC6Q9NR09 4857 aa2.35□□□□□ -2.03
UPF3A-207ENST00000481131 TRAV9-1A0A075B6T8 112 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 A0A087WTM6 91 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 PSCAO43653 123 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 CRPP02741 224 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 FGF6P10767 208 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 FCER1GP30273 86 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 TMEM97Q5BJF2 176 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 KRTAP26-1Q6PEX3 210 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 Q6ZUT4 128 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 SPATA12Q7Z6I5 190 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 KRTAP13-1Q8IUC0 172 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 OR10D4PQ8NGN7 298 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 C20orf78Q9BR46 151 aa2.34□□□□□ -2.03
UPF3A-207ENST00000481131 DYNC1H1Q14204 4646 aaKnown RBP2.33□□□□□ -2.04
UPF3A-207ENST00000481131 RYR1P21817 5038 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 K7EP13 123 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 SLC25A20O43772 301 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 PPBPP02775 128 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 IFI27P40305 119 aaPredicted RBP2.33□□□□□ -2.04
UPF3A-207ENST00000481131 HAMPP81172 84 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 FABP9Q0Z7S8 132 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 Q8N8P6 123 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 GNB1LQ9BYB4 327 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 MAP1LC3AQ9H492 121 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 UBE2D4Q9Y2X8 147 aa2.33□□□□□ -2.04
UPF3A-207ENST00000481131 CCL25O15444 150 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 PPP1R17O96001 155 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 MT-ND6P03923 174 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 PKIAP61925 76 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 Q0VG73 95 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 PMCHL1Q16048 86 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 MIAQ16674 131 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 Q8N814 137 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 OR5A1Q8NGJ0 315 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 C18orf32Q8TCD1 76 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 SMCO4Q9NRQ5 59 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 CDC42SE2Q9NRR3 84 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 LAMTOR2Q9Y2Q5 125 aa2.32□□□□□ -2.04
UPF3A-207ENST00000481131 LRP1BQ9NZR2 4599 aa2.31□□□□□ -2.04
UPF3A-207ENST00000481131 TRAV13-1A0A0B4J241 112 aa2.31□□□□□ -2.04
UPF3A-207ENST00000481131 LINC00959A0A1B0GUT2 108 aa2.31□□□□□ -2.04
UPF3A-207ENST00000481131 TRGC2P03986 189 aa2.31□□□□□ -2.04
UPF3A-207ENST00000481131 ZNF25P17030 456 aaPredicted RBP2.31□□□□□ -2.04
UPF3A-207ENST00000481131 XCL1P47992 114 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms