RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 NMUP48645 174 aa9.4□□□□□ -0.9
ABCF3-213ENST00000480539 UBE2BP63146 152 aa9.4□□□□□ -0.9
ABCF3-213ENST00000480539 C5orf52A6NGY3 159 aa9.39□□□□□ -0.91
ABCF3-213ENST00000480539 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
ABCF3-213ENST00000480539 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
ABCF3-213ENST00000480539 IGKV2D-26A0A0A0MRZ7 120 aa9.38□□□□□ -0.91
ABCF3-213ENST00000480539 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
ABCF3-213ENST00000480539 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
ABCF3-213ENST00000480539 NKAPP1Q8N9T2 125 aa9.37□□□□□ -0.91
ABCF3-213ENST00000480539 PLA2G2DQ9UNK4 145 aa9.37□□□□□ -0.91
ABCF3-213ENST00000480539 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
ABCF3-213ENST00000480539 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
ABCF3-213ENST00000480539 MRPL55Q7Z7F7 128 aaKnown RBP9.36□□□□□ -0.91
ABCF3-213ENST00000480539 DAND5Q8N907 189 aa9.36□□□□□ -0.91
ABCF3-213ENST00000480539 Q8NDZ9 215 aa9.36□□□□□ -0.91
ABCF3-213ENST00000480539 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
ABCF3-213ENST00000480539 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
ABCF3-213ENST00000480539 VPREB1P12018 145 aa9.35□□□□□ -0.91
ABCF3-213ENST00000480539 C1orf137Q5JT78 98 aa9.35□□□□□ -0.91
ABCF3-213ENST00000480539 TP73-AS1Q9UF72 201 aa9.35□□□□□ -0.91
ABCF3-213ENST00000480539 A0A0J9YXY3 114 aa9.34□□□□□ -0.91
ABCF3-213ENST00000480539 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
ABCF3-213ENST00000480539 LINC00587B1AMM8 73 aa9.34□□□□□ -0.91
ABCF3-213ENST00000480539 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
ABCF3-213ENST00000480539 TMA7Q9Y2S6 64 aaKnown RBP9.34□□□□□ -0.91
ABCF3-213ENST00000480539 MYCBP2O75592 4640 aa9.34□□□□□ -0.91
ABCF3-213ENST00000480539 AKR1D1P51857 326 aa9.33□□□□□ -0.92
ABCF3-213ENST00000480539 LINC00167Q96N53 147 aa9.33□□□□□ -0.92
ABCF3-213ENST00000480539 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
ABCF3-213ENST00000480539 BOD1L2Q8IYS8 172 aa9.32□□□□□ -0.92
ABCF3-213ENST00000480539 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
ABCF3-213ENST00000480539 IGKV2-28A0A075B6P5 120 aa9.3□□□□□ -0.92
ABCF3-213ENST00000480539 SCGB1D1O95968 90 aa9.3□□□□□ -0.92
ABCF3-213ENST00000480539 IGKV2D-28P01615 120 aa9.3□□□□□ -0.92
ABCF3-213ENST00000480539 NPC2P61916 151 aa9.3□□□□□ -0.92
ABCF3-213ENST00000480539 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
ABCF3-213ENST00000480539 NCR3O14931 201 aa9.29□□□□□ -0.92
ABCF3-213ENST00000480539 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
ABCF3-213ENST00000480539 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
ABCF3-213ENST00000480539 PCP2Q8IVA1 136 aa9.28□□□□□ -0.92
ABCF3-213ENST00000480539 LITAFQ99732 161 aa9.28□□□□□ -0.92
ABCF3-213ENST00000480539 MIEN1Q9BRT3 115 aa9.28□□□□□ -0.92
ABCF3-213ENST00000480539 FAT3Q8TDW7 4589 aa9.27□□□□□ -0.93
ABCF3-213ENST00000480539 HSBP1L1C9JCN9 74 aa9.26□□□□□ -0.93
ABCF3-213ENST00000480539 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
ABCF3-213ENST00000480539 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
ABCF3-213ENST00000480539 M0R378 163 aa9.25□□□□□ -0.93
ABCF3-213ENST00000480539 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
ABCF3-213ENST00000480539 TIMM17BO60830 172 aa9.25□□□□□ -0.93
ABCF3-213ENST00000480539 SRSF9Q13242 221 aaKnown RBP eCLIP9.25□□□□□ -0.93
ABCF3-213ENST00000480539 SPINK6Q6UWN8 80 aa9.25□□□□□ -0.93
ABCF3-213ENST00000480539 LRP1Q07954 4544 aaKnown RBP9.25□□□□□ -0.93
ABCF3-213ENST00000480539 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
ABCF3-213ENST00000480539 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
ABCF3-213ENST00000480539 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
ABCF3-213ENST00000480539 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
ABCF3-213ENST00000480539 BCE1O60756 84 aa9.23□□□□□ -0.93
ABCF3-213ENST00000480539 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
ABCF3-213ENST00000480539 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
ABCF3-213ENST00000480539 REG3GQ6UW15 175 aa9.21□□□□□ -0.94
ABCF3-213ENST00000480539 TMEM126AQ9H061 195 aa9.21□□□□□ -0.94
ABCF3-213ENST00000480539 SPANXB1Q9NS25 103 aaPredicted RBP9.21□□□□□ -0.94
ABCF3-213ENST00000480539 TRBV10-3A0A0K0K1G6 114 aa9.2□□□□□ -0.94
ABCF3-213ENST00000480539 J3QL48 77 aa9.2□□□□□ -0.94
ABCF3-213ENST00000480539 SPANXDQ9BXN6 97 aa9.2□□□□□ -0.94
ABCF3-213ENST00000480539 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
ABCF3-213ENST00000480539 H0Y9J4 135 aa9.19□□□□□ -0.94
ABCF3-213ENST00000480539 NDUFC2O95298 119 aa9.19□□□□□ -0.94
ABCF3-213ENST00000480539 OXTP01178 125 aa9.19□□□□□ -0.94
ABCF3-213ENST00000480539 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
ABCF3-213ENST00000480539 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
ABCF3-213ENST00000480539 ZNF861PO60384 105 aa9.18□□□□□ -0.94
ABCF3-213ENST00000480539 UBE2AP49459 152 aa9.18□□□□□ -0.94
ABCF3-213ENST00000480539 JOSD1Q15040 202 aaPredicted RBP9.18□□□□□ -0.94
ABCF3-213ENST00000480539 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
ABCF3-213ENST00000480539 PRYO14603 147 aa9.17□□□□□ -0.94
ABCF3-213ENST00000480539 DDTP30046 118 aa9.17□□□□□ -0.94
ABCF3-213ENST00000480539 RPL28P46779 137 aaKnown RBP9.17□□□□□ -0.94
ABCF3-213ENST00000480539 PRLHP81277 87 aa9.17□□□□□ -0.94
ABCF3-213ENST00000480539 PAM16Q9Y3D7 125 aa9.17□□□□□ -0.94
ABCF3-213ENST00000480539 SPATA45Q537H7 98 aa9.16□□□□□ -0.94
ABCF3-213ENST00000480539 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
ABCF3-213ENST00000480539 VAMP8Q9BV40 100 aa9.16□□□□□ -0.94
ABCF3-213ENST00000480539 S100A7L2Q5SY68 101 aa9.15□□□□□ -0.94
ABCF3-213ENST00000480539 COX8AP10176 69 aa9.14□□□□□ -0.95
ABCF3-213ENST00000480539 PYY3Q5JQD4 70 aa9.14□□□□□ -0.95
ABCF3-213ENST00000480539 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
ABCF3-213ENST00000480539 IGLV6-57P01721 117 aa9.13□□□□□ -0.95
ABCF3-213ENST00000480539 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
ABCF3-213ENST00000480539 IFITM1P13164 125 aa9.13□□□□□ -0.95
ABCF3-213ENST00000480539 MUSTN1Q8IVN3 82 aa9.13□□□□□ -0.95
ABCF3-213ENST00000480539 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
ABCF3-213ENST00000480539 S100A12P80511 92 aa9.12□□□□□ -0.95
ABCF3-213ENST00000480539 Q6ZVH6 145 aa9.12□□□□□ -0.95
ABCF3-213ENST00000480539 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
ABCF3-213ENST00000480539 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
ABCF3-213ENST00000480539 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
ABCF3-213ENST00000480539 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
ABCF3-213ENST00000480539 ETDCA0A1B0GVM5 59 aa9.11□□□□□ -0.95
ABCF3-213ENST00000480539 SPRR1AP35321 89 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms