RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 CRYGAP11844 174 aa9.16□□□□□ -0.94
CDK9-203ENST00000480353 VPREB1P12018 145 aa9.16□□□□□ -0.94
CDK9-203ENST00000480353 LINC00587B1AMM8 73 aa9.15□□□□□ -0.94
CDK9-203ENST00000480353 HERV-K104P63124 156 aa9.15□□□□□ -0.94
CDK9-203ENST00000480353 SLC7A5P1Q8MH63 180 aa9.15□□□□□ -0.94
CDK9-203ENST00000480353 TYMSOSQ8TAI1 123 aa9.15□□□□□ -0.94
CDK9-203ENST00000480353 HSPB8Q9UJY1 196 aa9.15□□□□□ -0.94
CDK9-203ENST00000480353 MAP1LC3CQ9BXW4 147 aa9.14□□□□□ -0.95
CDK9-203ENST00000480353 TMEM126AQ9H061 195 aa9.14□□□□□ -0.95
CDK9-203ENST00000480353 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
CDK9-203ENST00000480353 SERF1AO75920 110 aa9.13□□□□□ -0.95
CDK9-203ENST00000480353 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
CDK9-203ENST00000480353 PRLHP81277 87 aa9.13□□□□□ -0.95
CDK9-203ENST00000480353 TMEM238C9JI98 176 aa9.12□□□□□ -0.95
CDK9-203ENST00000480353 FABP4P15090 132 aa9.12□□□□□ -0.95
CDK9-203ENST00000480353 PLNP26678 52 aa9.12□□□□□ -0.95
CDK9-203ENST00000480353 HERVK_113P61574 105 aa9.12□□□□□ -0.95
CDK9-203ENST00000480353 PRR4Q16378 134 aa9.12□□□□□ -0.95
CDK9-203ENST00000480353 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
CDK9-203ENST00000480353 M0R378 163 aa9.11□□□□□ -0.95
CDK9-203ENST00000480353 TSPAN13O95857 204 aa9.11□□□□□ -0.95
CDK9-203ENST00000480353 A0A087X002 238 aa9.1□□□□□ -0.95
CDK9-203ENST00000480353 S100A12P80511 92 aa9.1□□□□□ -0.95
CDK9-203ENST00000480353 BOD1L2Q8IYS8 172 aa9.1□□□□□ -0.95
CDK9-203ENST00000480353 MIR7-3HGQ8N6C7 128 aa9.1□□□□□ -0.95
CDK9-203ENST00000480353 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
CDK9-203ENST00000480353 KRTAP13-1Q8IUC0 172 aa9.09□□□□□ -0.95
CDK9-203ENST00000480353 ANAPC11Q9NYG5 84 aa9.09□□□□□ -0.95
CDK9-203ENST00000480353 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
CDK9-203ENST00000480353 NCR3O14931 201 aa9.08□□□□□ -0.96
CDK9-203ENST00000480353 LEPROTO15243 131 aa9.08□□□□□ -0.96
CDK9-203ENST00000480353 DPM2O94777 84 aa9.08□□□□□ -0.96
CDK9-203ENST00000480353 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
CDK9-203ENST00000480353 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
CDK9-203ENST00000480353 LGALS3P17931 250 aaKnown RBP9.07□□□□□ -0.96
CDK9-203ENST00000480353 Q8NDZ9 215 aa9.07□□□□□ -0.96
CDK9-203ENST00000480353 COLCA2A8K830 154 aa9.06□□□□□ -0.96
CDK9-203ENST00000480353 IGKCP01834 107 aa9.06□□□□□ -0.96
CDK9-203ENST00000480353 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
CDK9-203ENST00000480353 MIEN1Q9BRT3 115 aa9.06□□□□□ -0.96
CDK9-203ENST00000480353 LRP2P98164 4655 aa9.05□□□□□ -0.96
CDK9-203ENST00000480353 J3QQQ9 107 aa9.05□□□□□ -0.96
CDK9-203ENST00000480353 PRYO14603 147 aa9.05□□□□□ -0.96
CDK9-203ENST00000480353 LINC00310P59036 64 aa9.05□□□□□ -0.96
CDK9-203ENST00000480353 NMUP48645 174 aa9.04□□□□□ -0.96
CDK9-203ENST00000480353 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
CDK9-203ENST00000480353 ZNF706Q9Y5V0 76 aaPredicted RBP9.03□□□□□ -0.96
CDK9-203ENST00000480353 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
CDK9-203ENST00000480353 DAND5Q8N907 189 aa9.02□□□□□ -0.97
CDK9-203ENST00000480353 LINC00304Q8N9R0 145 aa9.02□□□□□ -0.97
CDK9-203ENST00000480353 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
CDK9-203ENST00000480353 TRBV10-3A0A0K0K1G6 114 aa8.99□□□□□ -0.97
CDK9-203ENST00000480353 S100A7L2Q5SY68 101 aa8.99□□□□□ -0.97
CDK9-203ENST00000480353 LINC00337Q8N6G1 96 aa8.99□□□□□ -0.97
CDK9-203ENST00000480353 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
CDK9-203ENST00000480353 DDTP30046 118 aa8.98□□□□□ -0.97
CDK9-203ENST00000480353 SPANXB1Q9NS25 103 aaPredicted RBP8.97□□□□□ -0.97
CDK9-203ENST00000480353 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
CDK9-203ENST00000480353 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
CDK9-203ENST00000480353 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
CDK9-203ENST00000480353 E9PLD3 99 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 SYS1-DBNDD2H3BUS1 97 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 NPC2P61916 151 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
CDK9-203ENST00000480353 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
CDK9-203ENST00000480353 LOC107984156A0A0G2JMH3 177 aa8.94□□□□□ -0.98
CDK9-203ENST00000480353 SPRR1AP35321 89 aa8.94□□□□□ -0.98
CDK9-203ENST00000480353 ARL17AQ8IVW1 177 aa8.94□□□□□ -0.98
CDK9-203ENST00000480353 NDUFC2O95298 119 aa8.93□□□□□ -0.98
CDK9-203ENST00000480353 PPDPFQ9H3Y8 114 aa8.93□□□□□ -0.98
CDK9-203ENST00000480353 LPAP08519 4548 aa8.93□□□□□ -0.98
CDK9-203ENST00000480353 A0A0J9YXY3 114 aa8.92□□□□□ -0.98
CDK9-203ENST00000480353 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
CDK9-203ENST00000480353 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
CDK9-203ENST00000480353 CBY1Q9Y3M2 126 aa8.92□□□□□ -0.98
CDK9-203ENST00000480353 RNF213Q63HN8 5207 aa8.91□□□□□ -0.98
CDK9-203ENST00000480353 SPAG11AQ6PDA7 123 aa8.91□□□□□ -0.98
CDK9-203ENST00000480353 TRAV23DV6A0A075B6W5 121 aa8.9□□□□□ -0.98
CDK9-203ENST00000480353 HINT1P49773 126 aaPredicted RBP8.9□□□□□ -0.98
CDK9-203ENST00000480353 CTAG1AP78358 180 aa8.9□□□□□ -0.98
CDK9-203ENST00000480353 JOSD1Q15040 202 aaPredicted RBP8.9□□□□□ -0.98
CDK9-203ENST00000480353 GAGE2AQ6NT46 116 aa8.9□□□□□ -0.98
CDK9-203ENST00000480353 B5MCH6 92 aa8.89□□□□□ -0.99
CDK9-203ENST00000480353 LINC01545Q5VT33 79 aa8.89□□□□□ -0.99
CDK9-203ENST00000480353 C20orf202A1L168 122 aa8.88□□□□□ -0.99
CDK9-203ENST00000480353 ZNF815PA8K554 130 aa8.88□□□□□ -0.99
CDK9-203ENST00000480353 KRTAP4-16G5E9R7 235 aaPredicted RBP8.88□□□□□ -0.99
CDK9-203ENST00000480353 KRTDAPP60985 99 aa8.88□□□□□ -0.99
CDK9-203ENST00000480353 OR13C6PQ8NH95 151 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms