RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
ABCF1-206ENST00000479542 CHTOPQ9Y3Y2 248 aaKnown RBP7.73□□□□□ -1.17
ABCF1-206ENST00000479542 TRAV12-1A0A0B4J245 112 aa7.72□□□□□ -1.17
ABCF1-206ENST00000479542 TMEM170BQ5T4T1 132 aa7.72□□□□□ -1.17
ABCF1-206ENST00000479542 LINC00304Q8N9R0 145 aa7.72□□□□□ -1.17
ABCF1-206ENST00000479542 RPL37AP8A6NKH3 93 aa7.71□□□□□ -1.18
ABCF1-206ENST00000479542 HSBP1O75506 76 aa7.71□□□□□ -1.18
ABCF1-206ENST00000479542 FAM19A2Q8N3H0 131 aa7.71□□□□□ -1.18
ABCF1-206ENST00000479542 PFN2P35080 140 aa7.7□□□□□ -1.18
ABCF1-206ENST00000479542 UBE2AP49459 152 aa7.7□□□□□ -1.18
ABCF1-206ENST00000479542 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
ABCF1-206ENST00000479542 COLCA2A8K830 154 aa7.69□□□□□ -1.18
ABCF1-206ENST00000479542 LINC00310P59036 64 aa7.69□□□□□ -1.18
ABCF1-206ENST00000479542 NKAPP1Q8N9T2 125 aa7.69□□□□□ -1.18
ABCF1-206ENST00000479542 ZNF625Q96I27 306 aaPredicted RBP7.69□□□□□ -1.18
ABCF1-206ENST00000479542 CDIP1Q9H305 208 aa7.69□□□□□ -1.18
ABCF1-206ENST00000479542 ANAPC11Q9NYG5 84 aa7.69□□□□□ -1.18
ABCF1-206ENST00000479542 ERG28Q9UKR5 140 aa7.69□□□□□ -1.18
ABCF1-206ENST00000479542 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
ABCF1-206ENST00000479542 IGKV2D-26A0A0A0MRZ7 120 aa7.68□□□□□ -1.18
ABCF1-206ENST00000479542 TMEM223A0PJW6 202 aa7.68□□□□□ -1.18
ABCF1-206ENST00000479542 SERF1AO75920 110 aa7.68□□□□□ -1.18
ABCF1-206ENST00000479542 KRTAP9-6A0A140TA67 174 aa7.67□□□□□ -1.18
ABCF1-206ENST00000479542 GAGE10A6NGK3 116 aa7.67□□□□□ -1.18
ABCF1-206ENST00000479542 COX17Q14061 63 aa7.67□□□□□ -1.18
ABCF1-206ENST00000479542 SPAG11AQ6PDA7 123 aa7.67□□□□□ -1.18
ABCF1-206ENST00000479542 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
ABCF1-206ENST00000479542 SFTA2Q6UW10 78 aa7.66□□□□□ -1.18
ABCF1-206ENST00000479542 SCO1O75880 301 aa7.65□□□□□ -1.18
ABCF1-206ENST00000479542 LEPROTL1O95214 131 aa7.65□□□□□ -1.18
ABCF1-206ENST00000479542 PLEKHB2Q96CS7 222 aa7.65□□□□□ -1.18
ABCF1-206ENST00000479542 H0Y8G0 127 aa7.64□□□□□ -1.19
ABCF1-206ENST00000479542 VPREB1P12018 145 aa7.64□□□□□ -1.19
ABCF1-206ENST00000479542 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
ABCF1-206ENST00000479542 RETNLBQ9BQ08 111 aa7.64□□□□□ -1.19
ABCF1-206ENST00000479542 RPL24P83731 157 aaKnown RBP7.63□□□□□ -1.19
ABCF1-206ENST00000479542 Q8NDZ9 215 aa7.63□□□□□ -1.19
ABCF1-206ENST00000479542 TMEM126AQ9H061 195 aa7.63□□□□□ -1.19
ABCF1-206ENST00000479542 IGKV2-28A0A075B6P5 120 aa7.62□□□□□ -1.19
ABCF1-206ENST00000479542 IGKV2D-28P01615 120 aa7.62□□□□□ -1.19
ABCF1-206ENST00000479542 FABP4P15090 132 aa7.62□□□□□ -1.19
ABCF1-206ENST00000479542 LINC00158P58513 81 aa7.62□□□□□ -1.19
ABCF1-206ENST00000479542 PPDPFQ9H3Y8 114 aa7.62□□□□□ -1.19
ABCF1-206ENST00000479542 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
ABCF1-206ENST00000479542 M0R378 163 aa7.61□□□□□ -1.19
ABCF1-206ENST00000479542 EIF4EBP3O60516 100 aaPredicted RBP7.61□□□□□ -1.19
ABCF1-206ENST00000479542 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
ABCF1-206ENST00000479542 SMCPP49901 116 aaPredicted RBP7.6□□□□□ -1.19
ABCF1-206ENST00000479542 FAM19A1Q7Z5A9 133 aa7.6□□□□□ -1.19
ABCF1-206ENST00000479542 SMIM13P0DJ93 91 aa7.59□□□□□ -1.19
ABCF1-206ENST00000479542 PLNP26678 52 aa7.59□□□□□ -1.19
ABCF1-206ENST00000479542 HERV-K104P63124 156 aa7.59□□□□□ -1.19
ABCF1-206ENST00000479542 PRLHP81277 87 aa7.59□□□□□ -1.19
ABCF1-206ENST00000479542 PMCHL2Q9BQD1 86 aa7.59□□□□□ -1.19
ABCF1-206ENST00000479542 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
ABCF1-206ENST00000479542 DPM2O94777 84 aa7.58□□□□□ -1.2
ABCF1-206ENST00000479542 TSPEAR-AS2P59090 65 aa7.58□□□□□ -1.2
ABCF1-206ENST00000479542 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 TMEM238C9JI98 176 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 LEPROTO15243 131 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BKO60814 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 ATP6V1G1O75348 118 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BJP06899 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BOP23527 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BBP33778 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BDP58876 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BCP62807 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST2H2BEQ16778 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 MEIG1Q5JSS6 88 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.57□□□□□ -1.2
ABCF1-206ENST00000479542 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BHQ93079 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BNQ99877 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 HIST1H2BMQ99879 126 aa7.57□□□□□ -1.2
ABCF1-206ENST00000479542 IGKCP01834 107 aa7.56□□□□□ -1.2
ABCF1-206ENST00000479542 MIR7-3HGQ8N6C7 128 aa7.56□□□□□ -1.2
ABCF1-206ENST00000479542 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
ABCF1-206ENST00000479542 MAP1LC3CQ9BXW4 147 aa7.56□□□□□ -1.2
ABCF1-206ENST00000479542 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
ABCF1-206ENST00000479542 LINC00587B1AMM8 73 aa7.55□□□□□ -1.2
ABCF1-206ENST00000479542 SPINK1P00995 79 aa7.55□□□□□ -1.2
ABCF1-206ENST00000479542 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
ABCF1-206ENST00000479542 J3QQQ9 107 aa7.54□□□□□ -1.2
ABCF1-206ENST00000479542 HERVK_113P61574 105 aa7.54□□□□□ -1.2
ABCF1-206ENST00000479542 BOD1L2Q8IYS8 172 aa7.54□□□□□ -1.2
ABCF1-206ENST00000479542 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
ABCF1-206ENST00000479542 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
ABCF1-206ENST00000479542 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
ABCF1-206ENST00000479542 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
ABCF1-206ENST00000479542 NCR3O14931 201 aa7.52□□□□□ -1.21
ABCF1-206ENST00000479542 LGALS3P17931 250 aaKnown RBP7.51□□□□□ -1.21
ABCF1-206ENST00000479542 SPRR1AP35321 89 aa7.51□□□□□ -1.21
ABCF1-206ENST00000479542 NMUP48645 174 aa7.51□□□□□ -1.21
ABCF1-206ENST00000479542 DAND5Q8N907 189 aa7.51□□□□□ -1.21
ABCF1-206ENST00000479542 LOC107984156A0A0G2JMH3 177 aa7.5□□□□□ -1.21
ABCF1-206ENST00000479542 PRYO14603 147 aa7.5□□□□□ -1.21
ABCF1-206ENST00000479542 LINC01547P58512 204 aaPredicted RBP7.5□□□□□ -1.21
ABCF1-206ENST00000479542 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
ABCF1-206ENST00000479542 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms